RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 Ccdc150Q8CDI7 1110 aa9.39□□□□□ -0.91
Spen-201ENSMUST00000078886 ScribQ80U72 1612 aa9.39□□□□□ -0.91
Spen-201ENSMUST00000078886 Basp1Q91XV3 226 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Mxra7Q9CZH7 178 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Skor2A7M7C7 1008 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Rasa1E9PYG6 1038 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Gjc1P28229 396 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Taf7lQ9D3R9 471 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Cct4P80315 539 aaKnown RBP9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Golim4Q8BXA1 655 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Gsdma2Q32M21 443 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Zpr1Q62384 459 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Zranb3Q6NZP1 1069 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Rbm5Q91YE7 815 aaKnown RBP9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Cdc37l1Q9CZP7 335 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Cbfa2t2O70374 594 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Pde4cQ3UEI1 686 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Rab3il1Q8VDV3 383 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Zmat2Q9CPW7 199 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Myom3A2ABU4 1439 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Ift140E9PY46 1464 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Eef1dP57776 281 aaKnown RBP9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Txndc16Q7TN22 820 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 Synj1Q8CHC4 1574 aa9.38□□□□□ -0.91
Spen-201ENSMUST00000078886 E9QMW4 1145 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 DesP31001 469 aaKnown RBP9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Sem1P60897 70 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Igbp1bQ9QZ29 343 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Zfpm1O35615 995 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 CebpzP53569 1052 aaKnown RBP9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Tsg101Q61187 391 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Nap1l5Q9JJF0 156 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Exoc6bA6H5Z3 810 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Rnf168Q80XJ2 565 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Stmn2P55821 179 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Brf1Q8CFK2 676 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Fam76aQ922G2 307 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Hip1rQ9JKY5 1068 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Znf653Q6YND2 615 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Tex2Q6ZPJ0 1128 aaKnown RBP9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Mkrn1Q9QXP6 481 aa9.37□□□□□ -0.91
Spen-201ENSMUST00000078886 Ube2hP62257 183 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Iws1Q8C1D8 766 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Chrna2Q91X60 512 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Q9D9H8 365 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Erich2E9Q1A6 463 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Smarca5Q91ZW3 1051 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Nfxl1E9Q8I7 918 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 IkbkgO88522 412 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Map3k13Q1HKZ5 959 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Ppfibp1Q8C8U0 969 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Dync1i1O88485 628 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Stmn4P63042 189 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Mis12Q9CY25 206 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Spa17Q62252 149 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Fmnl3Q6ZPF4 1028 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Ebag9Q9D0V7 213 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Strn4P58404 760 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Ggnbp2Q5SV77 696 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Calml4Q91WQ9 153 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Rsph3bQ9DA80 389 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Ncbp1Q3UYV9 790 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Swap70Q6A028 585 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Bms1Q6PGF5 1284 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Nek5Q7TSC3 627 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 AdnpQ9Z103 1108 aaKnown RBP9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Trim34bJ3QNR8 485 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Terf2O35144 541 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 Ccdc178Q8CDV0 866 aa9.36□□□□□ -0.91
Spen-201ENSMUST00000078886 EvcP57680 1005 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Ccdc174Q3U155 467 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Ccdc148Q6P5U8 527 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Taok3Q8BYC6 898 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Ctage5Q8R311 779 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 PalmQ9Z0P4 383 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Ncapd3Q6ZQK0 1506 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Klhl10Q9D5V2 608 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Sclt1G5E861 688 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Tsga10Q6NY15 697 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Prdm16A2A935 1275 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Mcm5P49718 733 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Gtpbp10Q8K013 366 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Aldh1l1Q8R0Y6 902 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Tnip1Q9WUU8 647 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Stmn1P54227 149 aaKnown RBP9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Six6os1Q9CTN5 574 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Cib2Q9Z309 187 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Kiaa1328Q6NZK5 612 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Prpf40aQ9R1C7 953 aaKnown RBP9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Bin1O08539 588 aaKnown RBP9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Agbl1Q09M05 972 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 AidaQ8C4Q6 305 aa9.35□□□□□ -0.91
Spen-201ENSMUST00000078886 Gm45140A0A0N4SUM8 220 aa9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 VimP20152 466 aaKnown RBP9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 Sh2d4bA6X942 431 aa9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 Cd109Q8R422 1442 aa9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 Ccdc172Q810N9 267 aa9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 SfpqQ8VIJ6 699 aaKnown RBP9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 Stx6Q9JKK1 255 aa9.34□□□□□ -0.91
Spen-201ENSMUST00000078886 Mical3Q8CJ19 1993 aa9.34□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms