Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Gm25239-201ENSMUST00000174915 86 ntBASIC41.12■■■■■ 4.17
Sh2d4bA6X942 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
Sh2d4bA6X942 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.71■■■■□ 3.63
Sh2d4bA6X942 Gm24109-201ENSMUST00000175489 103 ntBASIC35.86■■■■□ 3.33
Sh2d4bA6X942 Gm15042-201ENSMUST00000120212 883 ntBASIC35.49■■■■□ 3.27
Sh2d4bA6X942 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
Sh2d4bA6X942 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.76■■■■□ 3.16
Sh2d4bA6X942 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
Sh2d4bA6X942 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Sh2d4bA6X942 Gm15045-201ENSMUST00000117359 883 ntBASIC34.56■■■■□ 3.12
Sh2d4bA6X942 Gm23366-201ENSMUST00000175022 89 ntBASIC34.33■■■■□ 3.09
Sh2d4bA6X942 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Sh2d4bA6X942 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Sh2d4bA6X942 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.63■■■□□ 2.97
Sh2d4bA6X942 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.6■■■□□ 2.97
Sh2d4bA6X942 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.35■■■□□ 2.93
Sh2d4bA6X942 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Sh2d4bA6X942 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.22■■■□□ 2.91
Sh2d4bA6X942 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Sh2d4bA6X942 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Sh2d4bA6X942 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
Sh2d4bA6X942 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.74■■■□□ 2.83
Sh2d4bA6X942 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Sh2d4bA6X942 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Sh2d4bA6X942 Gm25238-201ENSMUST00000174914 89 ntBASIC32.57■■■□□ 2.8
Sh2d4bA6X942 Psd-208ENSMUST00000224556 2034 ntBASIC32.39■■■□□ 2.78
Sh2d4bA6X942 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Sh2d4bA6X942 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Sh2d4bA6X942 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
Sh2d4bA6X942 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Sh2d4bA6X942 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.81■■■□□ 2.68
Sh2d4bA6X942 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
Sh2d4bA6X942 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Sh2d4bA6X942 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
Sh2d4bA6X942 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Sh2d4bA6X942 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Sh2d4bA6X942 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Sh2d4bA6X942 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.59■■■□□ 2.65
Sh2d4bA6X942 Gm25262-201ENSMUST00000174934 133 ntBASIC31.55■■■□□ 2.64
Sh2d4bA6X942 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.52■■■□□ 2.64
Sh2d4bA6X942 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Sh2d4bA6X942 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Sh2d4bA6X942 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Sh2d4bA6X942 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Sh2d4bA6X942 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.23■■■□□ 2.59
Sh2d4bA6X942 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.19■■■□□ 2.58
Sh2d4bA6X942 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.14■■■□□ 2.58
Sh2d4bA6X942 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Sh2d4bA6X942 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
Sh2d4bA6X942 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.01■■■□□ 2.55
Sh2d4bA6X942 Gm27325-201ENSMUST00000175467 74 ntBASIC30.99■■■□□ 2.55
Sh2d4bA6X942 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Sh2d4bA6X942 Gm26115-201ENSMUST00000175605 87 ntBASIC30.96■■■□□ 2.55
Sh2d4bA6X942 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Sh2d4bA6X942 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.91■■■□□ 2.54
Sh2d4bA6X942 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Sh2d4bA6X942 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
Sh2d4bA6X942 Rab21-202ENSMUST00000218831 843 ntBASIC30.79■■■□□ 2.52
Sh2d4bA6X942 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.77■■■□□ 2.52
Sh2d4bA6X942 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
Sh2d4bA6X942 Gm8109-201ENSMUST00000194076 746 ntBASIC30.66■■■□□ 2.5
Sh2d4bA6X942 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sh2d4bA6X942 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Sh2d4bA6X942 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.55■■■□□ 2.48
Sh2d4bA6X942 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Sh2d4bA6X942 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Sh2d4bA6X942 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Sh2d4bA6X942 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sh2d4bA6X942 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Sh2d4bA6X942 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Sh2d4bA6X942 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.26■■■□□ 2.43
Sh2d4bA6X942 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.23■■■□□ 2.43
Sh2d4bA6X942 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.21■■■□□ 2.43
Sh2d4bA6X942 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Sh2d4bA6X942 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Sh2d4bA6X942 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Sh2d4bA6X942 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Sh2d4bA6X942 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Sh2d4bA6X942 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30■■■□□ 2.39
Sh2d4bA6X942 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.98■■■□□ 2.39
Sh2d4bA6X942 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Sh2d4bA6X942 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.92■■■□□ 2.38
Sh2d4bA6X942 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Sh2d4bA6X942 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Sh2d4bA6X942 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.89■■■□□ 2.38
Sh2d4bA6X942 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Sh2d4bA6X942 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Sh2d4bA6X942 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Sh2d4bA6X942 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.8■■■□□ 2.36
Sh2d4bA6X942 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.78■■■□□ 2.36
Sh2d4bA6X942 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Sh2d4bA6X942 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Sh2d4bA6X942 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.7■■■□□ 2.34
Sh2d4bA6X942 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Sh2d4bA6X942 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
Sh2d4bA6X942 Gm24804-201ENSMUST00000174982 85 ntBASIC29.63■■■□□ 2.33
Sh2d4bA6X942 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.56■■■□□ 2.32
Sh2d4bA6X942 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Sh2d4bA6X942 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Sh2d4bA6X942 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.53■■■□□ 2.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms