RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Cfap74Q3UY96 1578 aa21.5■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Med4Q9CQA5 270 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Syce3B5KM66 88 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Abcd1P48410 736 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Plagl1Q9JLQ4 704 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Talpid3E9PV87 1520 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Gm7347D3YYI9 267 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Speer4aF8VPX6 267 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Rbm26Q6NZN0 1012 aaKnown RBP21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Plekho1Q9JIY0 408 aa21.49■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Speer4dL7N216 212 aa21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Rbm19Q8R3C6 952 aaKnown RBP21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Ddx46Q569Z5 1032 aaKnown RBP21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Amotl1Q9D4H4 968 aa21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Duxf3A0A0N4SV92 674 aa21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Pmfbp1Q9WVQ0 1022 aa21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Supt6hQ62383 1726 aaKnown RBP21.48■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Wdr63B2RY71 923 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Gimap8Q75N62 688 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Znf428Q8C1M2 176 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Znf287Q9EQB9 759 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Mug2P28666 1451 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Pnmal2G3X9N3 661 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Prim1P20664 417 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Fam170aQ66LM6 333 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Slc13a4Q8BZ82 625 aa21.47■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Pip4k2aO70172 405 aa21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Larp1Q6ZQ58 1072 aaKnown RBP21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Lrrc9Q8CDN9 1456 aa21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Cdk13Q69ZA1 1511 aaKnown RBP21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Hmgb2P30681 210 aaKnown RBP21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Eya1P97767 591 aa21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Ddb1Q3U1J4 1140 aaKnown RBP21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 FanclQ9CR14 375 aa21.46■■□□□ 1.03
Scaf11-201ENSMUST00000047835 Izumo3A6PWV3 263 aa21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Kank1E9Q238 1360 aa21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ptch1Q61115 1434 aa21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Cdkn1cP49919 348 aa21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Prm3Q62100 101 aa21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Zrsr2Q62377 462 aaKnown RBP21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Magi3Q9EQJ9 1476 aa21.45■■□□□ 1.02
Scaf11-201ENSMUST00000047835 PalldQ9ET54 1408 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 EvcP57680 1005 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Bag1Q60739 355 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Lrrc7Q80TE7 1490 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Emilin2Q8K482 1074 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Pa2g4P50580 394 aaKnown RBP21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Jarid2Q62315 1234 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 ThemisQ8BGW0 636 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Rnf41Q8BH75 317 aa21.44■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Astn2Q80Z10 1352 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 AcrbpQ3V140 540 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ptcd1Q8C2E4 695 aaKnown RBP21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Terf1P70371 421 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ccdc172Q810N9 267 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Nup160Q9Z0W3 1402 aaKnown RBP21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Hoxc9P09633 260 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Lamb3Q61087 1168 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Mns1Q61884 491 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Kdm3bQ6ZPY7 1562 aa21.43■■□□□ 1.02
Scaf11-201ENSMUST00000047835 St5Q924W7 1134 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Grm8P47743 908 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ercc6lQ8BHK9 1240 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Egfem1Q8C088 590 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 NpatQ8BMA5 1420 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ces1aE9PYP1 563 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Tmco3Q8BH01 678 aa21.42■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Map3k19E9Q3S4 1311 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Phlpp2Q8BXA7 1320 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ccdc158Q8CDI6 1109 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Ssr1Q9CY50 286 aaKnown RBP21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Txnrd1Q9JMH6 613 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Traf3ip1Q149C2 625 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Limch1Q3UH68 1057 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Trim27Q62158 513 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Krt25Q8VCW2 446 aa21.41■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Fbxo2Q80UW2 297 aa21.4■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Rbbp8nlA2ABX0 614 aa21.4■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Kifc2O08672 792 aa21.4■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Mctp2Q5RJH2 878 aa21.4■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Mcm3P25206 812 aaKnown RBP21.4■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Znf653Q6YND2 615 aa21.4■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Slain2Q8CI08 581 aa21.39■■□□□ 1.02
Scaf11-201ENSMUST00000047835 Stx8O88983 236 aa21.39■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Gnl2Q99LH1 728 aaKnown RBP21.39■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Adck5Q80V03 582 aa21.39■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Cfap45Q9D9U9 551 aa21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Frmd3Q8BHD4 595 aa21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Atf7Q8R0S1 413 aa21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Trim11Q99PQ2 467 aa21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Atp8b2P98199 1209 aa21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Atp2b3Q0VF55 1220 aa21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Ddx19aQ61655 478 aaKnown RBP21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Secisbp2lQ6A098 1086 aaKnown RBP21.38■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Ppfia1B2RXQ2 1266 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Gas2l2Q5SSG4 860 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Mrvi1Q9WUX5 899 aaKnown RBP21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Ccdc66Q6NS45 935 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Adgrl2Q8JZZ7 1487 aa21.37■■□□□ 1.01
Scaf11-201ENSMUST00000047835 Kdm3aQ6PCM1 1323 aa21.37■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms