RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ASF1BQ9NVP2 202 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 SNX12Q9UMY4 172 aa18.78■□□□□ 0.6
SFXN1-203ENST00000502393 TTC4O95801 387 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 HPP00738 406 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 ACPPP15309 386 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 SLC26A3P40879 764 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 MRPL49Q13405 166 aaKnown RBP18.77■□□□□ 0.6
SFXN1-203ENST00000502393 CRYMQ14894 314 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 HKDC1Q2TB90 917 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 EIF2S3LQ2VIR3 472 aaKnown RBP18.77■□□□□ 0.6
SFXN1-203ENST00000502393 VWA2Q5GFL6 755 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 THEMIS2Q5TEJ8 643 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 ATG9BQ674R7 924 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 ADCK2Q7Z695 626 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 PCGF5Q86SE9 256 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 CUZD1Q86UP6 607 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 CPNE9Q8IYJ1 553 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 SSC4DQ8WTU2 575 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 BARD1Q99728 777 aaKnown RBP18.77■□□□□ 0.6
SFXN1-203ENST00000502393 SYNPO2LQ9H987 977 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 PCYOX1Q9UHG3 505 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 TRMT6Q9UJA5 497 aaKnown RBP18.77■□□□□ 0.6
SFXN1-203ENST00000502393 PCDHGA10Q9Y5H3 936 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 COPG1Q9Y678 874 aaKnown RBP18.77■□□□□ 0.6
SFXN1-203ENST00000502393 MAST4O15021 2626 aa18.77■□□□□ 0.6
SFXN1-203ENST00000502393 USP9XQ93008 2570 aaPredicted RBP18.77■□□□□ 0.59
SFXN1-203ENST00000502393 MAP2K7O14733 419 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 SEMA7AO75326 666 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 CBX6O95503 412 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 HRH2P25021 359 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 IMPA1P29218 277 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 GLRBP48167 497 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 HIF1AQ16665 826 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 PIWIL4Q7Z3Z4 852 aaKnown RBP18.76■□□□□ 0.59
SFXN1-203ENST00000502393 LAPTM4BQ86VI4 370 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 PRSS58Q8IYP2 241 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 ARHGEF39Q8N4T4 335 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 MCOLN3Q8TDD5 553 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 SLCO2A1Q92959 643 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 MMABQ96EY8 250 aaPredicted RBP18.76■□□□□ 0.59
SFXN1-203ENST00000502393 THOC3Q96J01 351 aaKnown RBP18.76■□□□□ 0.59
SFXN1-203ENST00000502393 NAT9Q9BTE0 207 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 TGIF2Q9GZN2 237 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 EPS8L2Q9H6S3 715 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 ABCF3Q9NUQ8 709 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 C14orf105Q9NVL8 296 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 TRPC4Q9UBN4 977 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 ASIC3Q9UHC3 531 aa18.76■□□□□ 0.59
SFXN1-203ENST00000502393 IDSB3KWA1 339 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 DNALI1O14645 258 aaPredicted RBP18.75■□□□□ 0.59
SFXN1-203ENST00000502393 PCDH17O14917 1159 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 HAT1O14929 419 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 ANXA5P08758 320 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 RGS4P49798 205 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 EMP2P54851 167 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 Q0VFX4 171 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 FAM53BQ14153 422 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 NR6A1Q15406 480 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 SPANXN3Q5MJ09 141 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 NDUFAF7Q7L592 441 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 SPNS2Q8IVW8 549 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 AMER3Q8N944 861 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 PRR7Q8TB68 274 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 DNAJB14Q8TBM8 379 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 EEF1AKMT1Q8WVE0 214 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 CCDC138Q96M89 665 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 YIPF2Q9BWQ6 316 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 DRC3Q9H069 523 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 PCBD2Q9H0N5 130 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 ZNF160Q9HCG1 818 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 MKKSQ9NPJ1 570 aaPredicted RBP18.75■□□□□ 0.59
SFXN1-203ENST00000502393 CCDC177Q9NQR7 707 aaPredicted RBP18.75■□□□□ 0.59
SFXN1-203ENST00000502393 TMEM184CQ9NVA4 438 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 TAS2R13Q9NYV9 303 aa18.75■□□□□ 0.59
SFXN1-203ENST00000502393 USP9YO00507 2555 aaPredicted RBP18.75■□□□□ 0.59
SFXN1-203ENST00000502393 NSG1A0A0A6YYJ2 146 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 A0A1W2PQ72 361 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 H7BY64 318 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 FOXS1O43638 330 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 C8GP07360 202 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 CXCR2P25025 360 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 TIAL1Q01085 375 aaKnown RBP eCLIP18.74■□□□□ 0.59
SFXN1-203ENST00000502393 DHX9Q08211 1270 aaKnown RBP18.74■□□□□ 0.59
SFXN1-203ENST00000502393 NDUFA9Q16795 377 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 ISLR2Q6UXK2 745 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 KIAA0408Q6ZU52 694 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 CNTN4Q8IWV2 1026 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 PALM2Q8IXS6 379 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 KBTBD2Q8IY47 623 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 C8orf44Q96CB5 159 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 PRAP1Q96NZ9 151 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 LMF1Q96S06 567 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 NDNQ99608 321 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 MESP1Q9BRJ9 268 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 DDX47Q9H0S4 455 aaKnown RBP18.74■□□□□ 0.59
SFXN1-203ENST00000502393 PARVBQ9HBI1 364 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 AGPAT4Q9NRZ5 378 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 NOVA2Q9UNW9 492 aaKnown RBP18.74■□□□□ 0.59
SFXN1-203ENST00000502393 CSAG2Q9Y5P2 127 aa18.74■□□□□ 0.59
SFXN1-203ENST00000502393 KCNE1BA0A087WTH5 132 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms