RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	OMS1	Q06668	471 aa		7.61	□□□□□ -1.19
SNT309	YPR101W	PSR2	Q07949	397 aa		7.61	□□□□□ -1.19
SNT309	YPR101W	RRP6	Q12149	733 aa	Known RBP	7.61	□□□□□ -1.19
SNT309	YPR101W	BUG1	Q12191	341 aa		7.61	□□□□□ -1.19
SNT309	YPR101W	RPT3	P33298	428 aa	Known RBP	7.6	□□□□□ -1.19
SNT309	YPR101W	PTC3	P34221	468 aa	Known RBP	7.6	□□□□□ -1.19
SNT309	YPR101W	HUL4	P40985	892 aa		7.6	□□□□□ -1.19
SNT309	YPR101W	CTK3	P46963	296 aa	Predicted RBP	7.6	□□□□□ -1.19
SNT309	YPR101W	LSC2	P53312	427 aa		7.6	□□□□□ -1.19
SNT309	YPR101W	VTC3	Q02725	835 aa		7.6	□□□□□ -1.19
SNT309	YPR101W	RAD61	Q99359	647 aa		7.6	□□□□□ -1.19
SNT309	YPR101W	THR4	P16120	514 aa	Known RBP	7.59	□□□□□ -1.19
SNT309	YPR101W	CKI1	P20485	582 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	SPL2	P38839	148 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	PTC2	P39966	464 aa	Known RBP	7.59	□□□□□ -1.19
SNT309	YPR101W	VTC2	P43585	828 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	YGR153W	P48238	217 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	HFM1	P51979	1187 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	UTP22	P53254	1237 aa	Predicted RBP	7.59	□□□□□ -1.19
SNT309	YPR101W	RPT6	Q01939	405 aa	Known RBP	7.59	□□□□□ -1.19
SNT309	YPR101W	YMR102C	Q03177	834 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	BDF2	Q07442	638 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	NOP6	Q07623	225 aa	Known RBP	7.59	□□□□□ -1.19
SNT309	YPR101W	NUR1	Q12066	484 aa		7.59	□□□□□ -1.19
SNT309	YPR101W	FOB1	O13329	566 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	CIT1	P00890	479 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	SPO12	P17123	173 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	MAK11	P20484	414 aa	Known RBP	7.58	□□□□□ -1.2
SNT309	YPR101W	RAD57	P25301	460 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	PSO2	P30620	661 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	MDL2	P33311	773 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	TOM71	P38825	639 aa	Known RBP	7.58	□□□□□ -1.2
SNT309	YPR101W	SMF1	P38925	575 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	STT3	P39007	718 aa	Known RBP	7.58	□□□□□ -1.2
SNT309	YPR101W	VPS8	P39702	1274 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	THI6	P41835	540 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	YFH7	P43591	353 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	PIP2	P52960	996 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	RET3	P53600	189 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	IRC4	Q03036	179 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	NGL3	Q03210	505 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	UBX2	Q04228	584 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	YAP7	Q08182	245 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	YPL260W	Q08977	551 aa		7.58	□□□□□ -1.2
SNT309	YPR101W	RUD3	Q12234	484 aa	Known RBP	7.58	□□□□□ -1.2
SNT309	YPR101W	CLF1	Q12309	687 aa	Predicted RBP	7.58	□□□□□ -1.2
SNT309	YPR101W	FLO1	P32768	1537 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	TOP1	P04786	769 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	LCB1	P25045	558 aa	Known RBP	7.57	□□□□□ -1.2
SNT309	YPR101W	HXT1	P32465	570 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	GDT1	P38301	280 aa	Predicted RBP	7.57	□□□□□ -1.2
SNT309	YPR101W	MED8	P38304	223 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	RGD1	P38339	666 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	ECM1	P39715	212 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	RPN11	P43588	306 aa	Known RBP	7.57	□□□□□ -1.2
SNT309	YPR101W	UBA2	P52488	636 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	RPT4	P53549	437 aa	Known RBP	7.57	□□□□□ -1.2
SNT309	YPR101W	UME1	Q03010	460 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	GIS4	Q04233	774 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	PLP2	Q12017	286 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	RMP1	Q12530	201 aa		7.57	□□□□□ -1.2
SNT309	YPR101W	CDC8	P00572	216 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	AI4	P03878	556 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	SNF3	P10870	884 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	OM45	P16547	393 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	KRE2	P27809	442 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	PRO3	P32263	286 aa	Known RBP	7.56	□□□□□ -1.2
SNT309	YPR101W	EDS1	P38073	919 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	ERG7	P38604	731 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	RIX1	P38883	763 aa	Predicted RBP	7.56	□□□□□ -1.2
SNT309	YPR101W	VID27	P40157	782 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	MIC19	P43594	170 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	POB3	Q04636	552 aa	Known RBP	7.56	□□□□□ -1.2
SNT309	YPR101W	OPY2	Q06810	360 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	HKR1	P41809	1802 aa		7.56	□□□□□ -1.2
SNT309	YPR101W	PPR1	P07272	904 aa	Predicted RBP	7.55	□□□□□ -1.2
SNT309	YPR101W	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	not detected
SNT309	YPR101W	ECM32	P32644	1121 aa	Known RBP	7.55	□□□□□ -1.2
SNT309	YPR101W	SAS3	P34218	831 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	SLD2	P34252	453 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	UGA2	P38067	497 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	TDA3	P38758	523 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	SMC2	P38989	1170 aa	Known RBP	7.55	□□□□□ -1.2
SNT309	YPR101W	CCT3	P39077	534 aa	Known RBP	7.55	□□□□□ -1.2
SNT309	YPR101W	NPR2	P39923	615 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	MAD1	P40957	749 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	TRS120	Q04183	1289 aa		7.55	□□□□□ -1.2
SNT309	YPR101W	SLK19	Q08581	821 aa	Known RBP	7.55	□□□□□ -1.2
SNT309	YPR101W	MYO1	P08964	1928 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	TOM70	P07213	617 aa	Known RBP	7.54	□□□□□ -1.2
SNT309	YPR101W	CKA2	P19454	339 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	PDC6	P26263	563 aa	Known RBP	7.54	□□□□□ -1.2
SNT309	YPR101W	RPL8B	P29453	256 aa	Known RBP	7.54	□□□□□ -1.2
SNT309	YPR101W	SOL3	P38858	249 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	PES4	P39684	611 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	PXA1	P41909	870 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	JJJ2	P46997	583 aa		7.54	□□□□□ -1.2
SNT309	YPR101W	SDA1	P53313	767 aa	Known RBP	7.54	□□□□□ -1.2
SNT309	YPR101W	PRP42	Q03776	544 aa	Known RBP	7.54	□□□□□ -1.2
SNT309	YPR101W	SAS4	Q04003	481 aa		7.54	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 136.8 ms