RNA–Protein interactions for RNA: YPR046W

MCM16, Transcript of Component of the Ctf19 complex and the COMA subcomplex, yeast

Gene MCM16, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM16	YPR046W	HXT13	P39924	564 aa		4.94	□□□□□ -1.62
MCM16	YPR046W	SPO74	P45819	413 aa		4.94	□□□□□ -1.62
MCM16	YPR046W	CTH1	P47976	325 aa		4.94	□□□□□ -1.62
MCM16	YPR046W	HXT17	P53631	564 aa		4.94	□□□□□ -1.62
MCM16	YPR046W	YNR029C	P53729	429 aa	Known RBP	4.94	□□□□□ -1.62
MCM16	YPR046W	HXT15	P54854	567 aa		4.94	□□□□□ -1.62
MCM16	YPR046W	CMR1	Q12510	522 aa	Known RBP	4.94	□□□□□ -1.62
MCM16	YPR046W	FUS1	P11710	512 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	MRC1	P25588	1096 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	ABD1	P32783	436 aa	Predicted RBP	4.93	□□□□□ -1.62
MCM16	YPR046W	SCT1	P32784	759 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
MCM16	YPR046W	YKL077W	P36081	392 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	RDH54	P38086	958 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	SNF7	P39929	240 aa	Known RBP	4.93	□□□□□ -1.62
MCM16	YPR046W	TPM2	P40414	161 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	UGO1	Q03327	502 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	SPO71	Q03868	1245 aa		4.93	□□□□□ -1.62
MCM16	YPR046W	YLR225C	Q05948	407 aa	Known RBP	4.93	□□□□□ -1.62
MCM16	YPR046W	HEM13	P11353	328 aa	Known RBP	4.92	□□□□□ -1.62
MCM16	YPR046W	RPL8A	P17076	256 aa	Known RBP	4.92	□□□□□ -1.62
MCM16	YPR046W	MSB1	P21339	1137 aa	Known RBP	4.92	□□□□□ -1.62
MCM16	YPR046W	VMA4	P22203	233 aa	Known RBP	4.92	□□□□□ -1.62
MCM16	YPR046W	GRX7	P38068	203 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	SEA4	P38164	1038 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	POL5	P39985	1022 aa	Known RBP	4.92	□□□□□ -1.62
MCM16	YPR046W	PFD1	P46988	109 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	ZDS1	P50111	915 aa	Known RBP	4.92	□□□□□ -1.62
MCM16	YPR046W	TAF8	Q03750	510 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	NTG2	Q08214	380 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	GLO4	Q12320	285 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	ADR1	P07248	1323 aa		4.92	□□□□□ -1.62
MCM16	YPR046W	PRP9	P19736	530 aa	Known RBP	4.91	□□□□□ -1.62
MCM16	YPR046W	TFA2	P36145	328 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	PAF1	P38351	445 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	GEM1	P39722	662 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	NEO1	P40527	1151 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	ROD1	Q02805	837 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	VPS72	Q03388	795 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	AOS1	Q06624	347 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	YDL124W	Q07551	312 aa	Known RBP	4.91	□□□□□ -1.62
MCM16	YPR046W	YOL057W	Q08225	711 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	RKM4	Q12504	494 aa		4.91	□□□□□ -1.62
MCM16	YPR046W	INO1	P11986	533 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	PEX6	P33760	1030 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	ALR2	P43553	858 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	NCE103	P53615	221 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	EST2	Q06163	884 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	ESC2	Q06340	456 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	ELG1	Q12050	791 aa		4.9	□□□□□ -1.63
MCM16	YPR046W	MKK2	P32491	506 aa		4.89	□□□□□ -1.63
MCM16	YPR046W	SWE1	P32944	819 aa		4.89	□□□□□ -1.63
MCM16	YPR046W	EXO5	P38289	585 aa		4.89	□□□□□ -1.63
MCM16	YPR046W	HSV2	P50079	448 aa	Predicted RBP	4.89	□□□□□ -1.63
MCM16	YPR046W	RTA1	P53047	317 aa		4.89	□□□□□ -1.63
MCM16	YPR046W	FOL1	P53848	824 aa		4.89	□□□□□ -1.63
MCM16	YPR046W	TIF35	Q04067	274 aa	Known RBP	4.89	□□□□□ -1.63
MCM16	YPR046W	HVG1	P0CE11	249 aa		4.88	□□□□□ -1.63
MCM16	YPR046W	SYP1	P25623	870 aa	Known RBP	4.88	□□□□□ -1.63
MCM16	YPR046W	ELM1	P32801	640 aa		4.88	□□□□□ -1.63
MCM16	YPR046W	ENP1	P38333	483 aa	Known RBP	4.88	□□□□□ -1.63
MCM16	YPR046W	GDH3	P39708	457 aa		4.88	□□□□□ -1.63
MCM16	YPR046W	MTR4	P47047	1073 aa	Known RBP	4.88	□□□□□ -1.63
MCM16	YPR046W	HLJ1	P48353	224 aa		4.88	□□□□□ -1.63
MCM16	YPR046W	TFB2	Q02939	513 aa		4.88	□□□□□ -1.63
MCM16	YPR046W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
MCM16	YPR046W	HTS1	P07263	546 aa	Known RBP	4.87	□□□□□ -1.63
MCM16	YPR046W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
MCM16	YPR046W	CDC11	P32458	415 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	YKL107W	P34251	309 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	MOT2	P34909	587 aa	Known RBP	4.87	□□□□□ -1.63
MCM16	YPR046W	ADD66	P36040	267 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	BET3	P36149	193 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
MCM16	YPR046W	YGL176C	P46945	554 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	YJR124C	P47159	448 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	PMT3	P47190	753 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	YNR065C	P53751	1116 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	GIC2	Q06648	383 aa		4.87	□□□□□ -1.63
MCM16	YPR046W	ERS1	P17261	260 aa		4.86	□□□□□ -1.63
MCM16	YPR046W	DBP5	P20449	482 aa	Known RBP	4.86	□□□□□ -1.63
MCM16	YPR046W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
MCM16	YPR046W	PMC1	P38929	1173 aa	Predicted RBP	4.86	□□□□□ -1.63
MCM16	YPR046W	MBP1	P39678	833 aa		4.86	□□□□□ -1.63
MCM16	YPR046W	CNN1	P43618	361 aa		4.86	□□□□□ -1.63
MCM16	YPR046W	KIP3	P53086	805 aa	Known RBP	4.86	□□□□□ -1.63
MCM16	YPR046W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
MCM16	YPR046W	ATG13	Q06628	738 aa		4.86	□□□□□ -1.63
MCM16	YPR046W	DED1	P06634	604 aa	Known RBP	4.85	□□□□□ -1.63
MCM16	YPR046W	ARL1	P38116	183 aa	Known RBP	4.85	□□□□□ -1.63
MCM16	YPR046W	YGR237C	P50089	785 aa		4.85	□□□□□ -1.63
MCM16	YPR046W	UTP22	P53254	1237 aa	Predicted RBP	4.85	□□□□□ -1.63
MCM16	YPR046W	YNL193W	P53870	558 aa		4.85	□□□□□ -1.63
MCM16	YPR046W	HAS1	Q03532	505 aa	Known RBP	4.85	□□□□□ -1.63
MCM16	YPR046W	RKM2	Q03942	479 aa		4.85	□□□□□ -1.63
MCM16	YPR046W	UTP5	Q04177	643 aa	Known RBP	4.85	□□□□□ -1.63
MCM16	YPR046W	HBN1	Q96VH4	193 aa		4.85	□□□□□ -1.63
MCM16	YPR046W	DOM34	P33309	386 aa		4.84	□□□□□ -1.63
MCM16	YPR046W	ATG14	P38270	344 aa		4.84	□□□□□ -1.63
MCM16	YPR046W	FET4	P40988	552 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms