RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C RTT10Q08924 1013 aa2.66□□□□□ -1.98
NIP100YPL174C TMA46Q12000 345 aaKnown RBP2.66□□□□□ -1.98
NIP100YPL174C GCR1P07261 785 aa2.66□□□□□ -1.98
NIP100YPL174C KIN2P13186 1147 aaKnown RBP2.66□□□□□ -1.98
NIP100YPL174C RGD1P38339 666 aa2.66□□□□□ -1.98
NIP100YPL174C SNF7P39929 240 aaKnown RBP2.66□□□□□ -1.98
NIP100YPL174C CNN1P43618 361 aa2.66□□□□□ -1.98
NIP100YPL174C APL1P27351 700 aa2.65□□□□□ -1.98
NIP100YPL174C MKK2P32491 506 aa2.65□□□□□ -1.98
NIP100YPL174C MOT2P34909 587 aaKnown RBP2.65□□□□□ -1.98
NIP100YPL174C YJR107WP47145 328 aa2.65□□□□□ -1.98
NIP100YPL174C RMD1Q03441 430 aa2.65□□□□□ -1.98
NIP100YPL174C CLN2P20438 545 aa2.65□□□□□ -1.99
NIP100YPL174C SEA4P38164 1038 aa2.65□□□□□ -1.99
NIP100YPL174C UBP5P39944 805 aa2.65□□□□□ -1.99
NIP100YPL174C NIT1P40447 199 aa2.65□□□□□ -1.99
NIP100YPL174C SPT20P50875 604 aa2.65□□□□□ -1.99
NIP100YPL174C ENV11P53246 860 aa2.65□□□□□ -1.99
NIP100YPL174C MRPL22P53881 309 aa2.65□□□□□ -1.99
NIP100YPL174C AIM3P38266 947 aaKnown RBP2.64□□□□□ -1.99
NIP100YPL174C ENT3P47160 408 aa2.64□□□□□ -1.99
NIP100YPL174C DBP5P20449 482 aaKnown RBP2.64□□□□□ -1.99
NIP100YPL174C AFG2P32794 780 aa2.64□□□□□ -1.99
NIP100YPL174C RDH54P38086 958 aa2.64□□□□□ -1.99
NIP100YPL174C PIK1P39104 1066 aa2.64□□□□□ -1.99
NIP100YPL174C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
NIP100YPL174C FAL1Q12099 399 aaKnown RBP2.64□□□□□ -1.99
NIP100YPL174C LPX1Q12405 387 aaKnown RBP2.64□□□□□ -1.99
NIP100YPL174C GLT1Q12680 2145 aaKnown RBP2.63□□□□□ -1.99
NIP100YPL174C CMP2P14747 604 aa2.63□□□□□ -1.99
NIP100YPL174C BAS1P22035 811 aa2.63□□□□□ -1.99
NIP100YPL174C ELM1P32801 640 aa2.63□□□□□ -1.99
NIP100YPL174C RFC5P38251 354 aa2.63□□□□□ -1.99
NIP100YPL174C INO1P11986 533 aa2.63□□□□□ -1.99
NIP100YPL174C SAM35P14693 329 aa2.63□□□□□ -1.99
NIP100YPL174C LYP1P32487 611 aa2.63□□□□□ -1.99
NIP100YPL174C YKL107WP34251 309 aa2.63□□□□□ -1.99
NIP100YPL174C SVF1Q05515 481 aa2.63□□□□□ -1.99
NIP100YPL174C SVS1Q12254 260 aa2.63□□□□□ -1.99
NIP100YPL174C ENA1P13587 1091 aa2.62□□□□□ -1.99
NIP100YPL174C SEC26P41810 973 aaKnown RBP2.62□□□□□ -1.99
NIP100YPL174C SNU71P53207 620 aaKnown RBP2.62□□□□□ -1.99
NIP100YPL174C ENA2Q01896 1091 aa2.62□□□□□ -1.99
NIP100YPL174C GDE1Q02979 1223 aa2.62□□□□□ -1.99
NIP100YPL174C ROT1Q03691 256 aa2.62□□□□□ -1.99
NIP100YPL174C ENA5Q12691 1091 aa2.62□□□□□ -1.99
NIP100YPL174C THS1P04801 734 aaKnown RBP2.62□□□□□ -1.99
NIP100YPL174C YER152CP10356 443 aa2.62□□□□□ -1.99
NIP100YPL174C TOD6P34219 525 aa2.62□□□□□ -1.99
NIP100YPL174C RPN3P40016 523 aaKnown RBP2.62□□□□□ -1.99
NIP100YPL174C RIM8P53179 542 aa2.62□□□□□ -1.99
NIP100YPL174C CYC1P00044 109 aaPredicted RBP2.61□□□□□ -1.99
NIP100YPL174C GTF1P53260 183 aaPredicted RBP2.61□□□□□ -1.99
NIP100YPL174C SGD1Q06132 899 aa2.61□□□□□ -1.99
NIP100YPL174C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
NIP100YPL174C GNT1Q12096 491 aa2.61□□□□□ -1.99
NIP100YPL174C HEM13P11353 328 aaKnown RBP2.61□□□□□ -1.99
NIP100YPL174C RER2P35196 286 aa2.61□□□□□ -1.99
NIP100YPL174C MNR2P35724 969 aa2.61□□□□□ -1.99
NIP100YPL174C TYW3P53177 273 aa2.61□□□□□ -1.99
NIP100YPL174C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
NIP100YPL174C TRP2P00899 507 aaKnown RBP2.6□□□□□ -1.99
NIP100YPL174C RPS13P05756 151 aaKnown RBP2.6□□□□□ -1.99
NIP100YPL174C SAH1P39954 449 aaKnown RBP2.6□□□□□ -1.99
NIP100YPL174C YGL176CP46945 554 aa2.6□□□□□ -1.99
NIP100YPL174C PBP1P53297 722 aaKnown RBP2.6□□□□□ -1.99
NIP100YPL174C TIF35Q04067 274 aaKnown RBP2.6□□□□□ -1.99
NIP100YPL174C YLR225CQ05948 407 aaKnown RBP2.6□□□□□ -1.99
NIP100YPL174C PRI2P20457 528 aa2.6□□□□□ -1.99
NIP100YPL174C YPR196WQ06595 470 aa2.6□□□□□ -1.99
NIP100YPL174C OSW2Q12202 724 aa2.6□□□□□ -1.99
NIP100YPL174C YDL177CQ12257 170 aa2.6□□□□□ -1.99
NIP100YPL174C RKM4Q12504 494 aa2.6□□□□□ -1.99
NIP100YPL174C CDC34P14682 295 aa2.59□□□□□ -1.99
NIP100YPL174C PPH3P32345 308 aa2.59□□□□□ -1.99
NIP100YPL174C UGA2P38067 497 aa2.59□□□□□ -1.99
NIP100YPL174C MXR1P40029 184 aa2.59□□□□□ -1.99
NIP100YPL174C TPO2P53283 614 aa2.59□□□□□ -1.99
NIP100YPL174C RRP15Q06511 250 aaPredicted RBP2.59□□□□□ -1.99
NIP100YPL174C YPL277CQ08989 487 aa2.59□□□□□ -1.99
NIP100YPL174C YFL054CP43549 646 aa2.59□□□□□ -1.99
NIP100YPL174C RCL1Q08096 367 aaPredicted RBP2.59□□□□□ -1.99
NIP100YPL174C ACM1Q08981 209 aa2.59□□□□□ -1.99
NIP100YPL174C GAL10P04397 699 aa2.58□□□□□ -2
NIP100YPL174C NOP7P53261 605 aaKnown RBP2.58□□□□□ -2
NIP100YPL174C ORC3P54790 616 aa2.58□□□□□ -2
NIP100YPL174C CDA2Q06703 312 aa2.58□□□□□ -2
NIP100YPL174C RXT3Q07458 294 aa2.58□□□□□ -2
NIP100YPL174C ESC8Q08119 714 aa2.58□□□□□ -2
NIP100YPL174C ABD1P32783 436 aaPredicted RBP2.58□□□□□ -2
NIP100YPL174C LAM1P38851 1228 aa2.58□□□□□ -2
NIP100YPL174C FAA4P47912 694 aaKnown RBP2.58□□□□□ -2
NIP100YPL174C YLR358CO13565 187 aa2.57□□□□□ -2
NIP100YPL174C SNF5P18480 905 aa2.57□□□□□ -2
NIP100YPL174C GIP4P39732 760 aa2.57□□□□□ -2
NIP100YPL174C VAC8P39968 578 aa2.57□□□□□ -2
NIP100YPL174C PSP2P50109 593 aaKnown RBP2.57□□□□□ -2
NIP100YPL174C SRP1Q02821 542 aaKnown RBP2.57□□□□□ -2
NIP100YPL174C RPL11AP0C0W9 174 aaKnown RBP2.57□□□□□ -2
NIP100YPL174C PIN4P34217 668 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms