RNA–Protein interactions for RNA: YPL109C

YPL109C, Transcript of Putative protein of unknown function, yeast

Gene YPL109C, Length 1,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL109C	YPL109C	SSB1	P11484	613 aa	Known RBP	4.82	□□□□□ -1.64
YPL109C	YPL109C	BAS1	P22035	811 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	STE5	P32917	917 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	HXT13	P39924	564 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	SSB2	P40150	613 aa	Known RBP	4.82	□□□□□ -1.64
YPL109C	YPL109C	RTS3	P53289	263 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	HXT17	P53631	564 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	HXT15	P54854	567 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	COQ2	P32378	372 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	AFG2	P32794	780 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	YAR028W	P39548	234 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	RSP5	P39940	809 aa	Known RBP	4.82	□□□□□ -1.64
YPL109C	YPL109C	ALT1	P52893	592 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	EAR1	Q03212	550 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	AVO1	Q08236	1176 aa		4.82	□□□□□ -1.64
YPL109C	YPL109C	TAF13	P11747	167 aa		4.81	□□□□□ -1.64
YPL109C	YPL109C	RAD27	P26793	382 aa		4.81	□□□□□ -1.64
YPL109C	YPL109C	ADD66	P36040	267 aa		4.81	□□□□□ -1.64
YPL109C	YPL109C	YBR184W	P38299	523 aa		4.81	□□□□□ -1.64
YPL109C	YPL109C	YNR063W	P53749	607 aa		4.81	□□□□□ -1.64
YPL109C	YPL109C	SPO75	Q07798	868 aa		4.81	□□□□□ -1.64
YPL109C	YPL109C	CHS2	P14180	963 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	AGP1	P25376	633 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	SMY2	P32909	740 aa	Known RBP	4.8	□□□□□ -1.64
YPL109C	YPL109C	ROD1	Q02805	837 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	MDS3	P53094	1487 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	MYO2	P19524	1574 aa	Known RBP	4.8	□□□□□ -1.64
YPL109C	YPL109C	TRP3	P00937	484 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	DED1	P06634	604 aa	Known RBP	4.8	□□□□□ -1.64
YPL109C	YPL109C	RPS4A	P0CX35	261 aa	Known RBP	4.8	□□□□□ -1.64
YPL109C	YPL109C	RPS4B	P0CX36	261 aa	Known RBP	4.8	□□□□□ -1.64
YPL109C	YPL109C	KAE1	P36132	386 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	YGR125W	P53273	1036 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	SIW14	P53965	281 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
YPL109C	YPL109C	RKM2	Q03942	479 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	SHE9	Q04172	456 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	EST2	Q06163	884 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	OSH2	Q12451	1283 aa		4.8	□□□□□ -1.64
YPL109C	YPL109C	TRP2	P00899	507 aa	Known RBP	4.79	□□□□□ -1.64
YPL109C	YPL109C	RPL8B	P29453	256 aa	Known RBP	4.79	□□□□□ -1.64
YPL109C	YPL109C	THI4	P32318	326 aa		4.79	□□□□□ -1.64
YPL109C	YPL109C	WHI3	P34761	661 aa	Known RBP	4.79	□□□□□ -1.64
YPL109C	YPL109C	YKR073C	P36153	106 aa		4.79	□□□□□ -1.64
YPL109C	YPL109C	NUG1	P40010	520 aa	Known RBP	4.79	□□□□□ -1.64
YPL109C	YPL109C	YGR130C	P53278	816 aa		4.79	□□□□□ -1.64
YPL109C	YPL109C	SSK2	P53599	1579 aa		4.79	□□□□□ -1.64
YPL109C	YPL109C	CAN1	P04817	590 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	ERR1	P0CX10	437 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	ERR2	P0CX11	437 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	NFS1	P25374	497 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	MRP8	P35719	219 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	NNK1	P36003	928 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	SEA4	P38164	1038 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	GGA2	P38817	585 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	NMD3	P38861	518 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	UBP12	P39538	1254 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	IRR1	P40541	1150 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	MMM1	P41800	426 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	KRI1	P42846	591 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	RAT1	Q02792	1006 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	RSA3	Q05942	220 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	FMP25	Q08023	583 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	GAL11	P19659	1081 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	HSP60	P19882	572 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	SBA1	P28707	216 aa	Known RBP	4.78	□□□□□ -1.64
YPL109C	YPL109C	LYP1	P32487	611 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	MKK2	P32491	506 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	RER2	P35196	286 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	ENT3	P47160	408 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	SPO20	Q04359	397 aa		4.78	□□□□□ -1.64
YPL109C	YPL109C	ATG2	P53855	1592 aa		4.77	□□□□□ -1.65
YPL109C	YPL109C	CIT1	P00890	479 aa		4.77	□□□□□ -1.65
YPL109C	YPL109C	RET1	P22276	1149 aa	Known RBP	4.77	□□□□□ -1.65
YPL109C	YPL109C	ABD1	P32783	436 aa	Predicted RBP	4.77	□□□□□ -1.65
YPL109C	YPL109C	VBA5	P36172	582 aa		4.77	□□□□□ -1.65
YPL109C	YPL109C	PFD1	P46988	109 aa		4.77	□□□□□ -1.65
YPL109C	YPL109C	YLR257W	Q06146	321 aa	Known RBP	4.77	□□□□□ -1.65
YPL109C	YPL109C	ALO1	P54783	526 aa	Known RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	DNM1	P54861	757 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	ESC2	Q06340	456 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	PUS7	Q08647	676 aa	Known RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	YVC1	Q12324	675 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	NOP14	Q99207	810 aa	Known RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	PEP1	P32319	1579 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	SBP1	P10080	294 aa	Known RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	MSB1	P21339	1137 aa	Known RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	ALG3	P38179	458 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	QNS1	P38795	714 aa	Known RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	OYE3	P41816	400 aa	Predicted RBP	4.76	□□□□□ -1.65
YPL109C	YPL109C	CIT3	P43635	486 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	ERP6	P53198	216 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	LAP2	Q10740	671 aa		4.76	□□□□□ -1.65
YPL109C	YPL109C	GCD1	P09032	578 aa	Predicted RBP	4.75	□□□□□ -1.65
YPL109C	YPL109C	SRM1	P21827	482 aa		4.75	□□□□□ -1.65
YPL109C	YPL109C	PBY1	P38254	753 aa		4.75	□□□□□ -1.65
YPL109C	YPL109C	ATG14	P38270	344 aa		4.75	□□□□□ -1.65
YPL109C	YPL109C	YLR225C	Q05948	407 aa	Known RBP	4.75	□□□□□ -1.65
YPL109C	YPL109C	EAF1	Q06337	982 aa		4.75	□□□□□ -1.65
YPL109C	YPL109C	ESP1	Q03018	1630 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms