RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	EXO5	P38289	585 aa		4.92	□□□□□ -1.62
RPA43	YOR340C	MED7	Q08278	222 aa		4.92	□□□□□ -1.62
RPA43	YOR340C	REC8	Q12188	680 aa		4.92	□□□□□ -1.62
RPA43	YOR340C	YLR122C	Q12312	125 aa		4.92	□□□□□ -1.62
RPA43	YOR340C	COQ2	P32378	372 aa		4.91	□□□□□ -1.62
RPA43	YOR340C	KAE1	P36132	386 aa		4.91	□□□□□ -1.62
RPA43	YOR340C	ATG14	P38270	344 aa		4.91	□□□□□ -1.62
RPA43	YOR340C	MTR4	P47047	1073 aa	Known RBP	4.91	□□□□□ -1.62
RPA43	YOR340C	KIP3	P53086	805 aa	Known RBP	4.91	□□□□□ -1.62
RPA43	YOR340C	NCE103	P53615	221 aa		4.91	□□□□□ -1.62
RPA43	YOR340C	MEC3	Q02574	474 aa		4.91	□□□□□ -1.62
RPA43	YOR340C	USO1	P25386	1790 aa		4.91	□□□□□ -1.62
RPA43	YOR340C	TRP3	P00937	484 aa		4.9	□□□□□ -1.63
RPA43	YOR340C	NAP1	P25293	417 aa	Known RBP	4.9	□□□□□ -1.63
RPA43	YOR340C	PET112	P33893	541 aa		4.9	□□□□□ -1.63
RPA43	YOR340C	REI1	P38344	393 aa	Predicted RBP	4.9	□□□□□ -1.63
RPA43	YOR340C	AKR1	P39010	764 aa		4.9	□□□□□ -1.63
RPA43	YOR340C	PIC2	P40035	300 aa		4.9	□□□□□ -1.63
RPA43	YOR340C	AOS1	Q06624	347 aa		4.9	□□□□□ -1.63
RPA43	YOR340C	YOR223W	Q12015	292 aa		4.9	□□□□□ -1.63
RPA43	YOR340C	SRB8	P25648	1427 aa		4.89	□□□□□ -1.63
RPA43	YOR340C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RPA43	YOR340C	SEC23	P15303	768 aa	Known RBP	4.89	□□□□□ -1.63
RPA43	YOR340C	VMA4	P22203	233 aa	Known RBP	4.89	□□□□□ -1.63
RPA43	YOR340C	ARL1	P38116	183 aa	Known RBP	4.89	□□□□□ -1.63
RPA43	YOR340C	SAF1	P38352	637 aa		4.89	□□□□□ -1.63
RPA43	YOR340C	XKS1	P42826	600 aa		4.89	□□□□□ -1.63
RPA43	YOR340C	YGL140C	P53120	1219 aa		4.89	□□□□□ -1.63
RPA43	YOR340C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
RPA43	YOR340C	ALG6	Q12001	544 aa	Known RBP	4.89	□□□□□ -1.63
RPA43	YOR340C	VMR1	P38735	1592 aa		4.89	□□□□□ -1.63
RPA43	YOR340C	NUP188	P52593	1655 aa	Known RBP	4.89	□□□□□ -1.63
RPA43	YOR340C	ELM1	P32801	640 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	OCA5	P38738	679 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	NEM1	P38757	446 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	SLS1	P42900	643 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	AVT1	P47082	602 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	DOT1	Q04089	582 aa	Known RBP	4.88	□□□□□ -1.63
RPA43	YOR340C	MAG2	Q06436	670 aa	Known RBP	4.88	□□□□□ -1.63
RPA43	YOR340C	MRL1	Q06815	381 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	AVO1	Q08236	1176 aa		4.88	□□□□□ -1.63
RPA43	YOR340C	TAF13	P11747	167 aa		4.87	□□□□□ -1.63
RPA43	YOR340C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RPA43	YOR340C	CTH1	P47976	325 aa		4.87	□□□□□ -1.63
RPA43	YOR340C	DED1	P06634	604 aa	Known RBP	4.86	□□□□□ -1.63
RPA43	YOR340C	CHS2	P14180	963 aa		4.86	□□□□□ -1.63
RPA43	YOR340C	TOS1	P38288	455 aa		4.86	□□□□□ -1.63
RPA43	YOR340C	MAD1	P40957	749 aa		4.86	□□□□□ -1.63
RPA43	YOR340C	SPO74	P45819	413 aa		4.86	□□□□□ -1.63
RPA43	YOR340C	YGR130C	P53278	816 aa		4.86	□□□□□ -1.63
RPA43	YOR340C	UTP5	Q04177	643 aa	Known RBP	4.86	□□□□□ -1.63
RPA43	YOR340C	IML1	P47170	1584 aa		4.86	□□□□□ -1.63
RPA43	YOR340C	MNR2	P35724	969 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	GPT2	P36148	743 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	YAP3	P38749	330 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	YAR028W	P39548	234 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	NNF1	P47149	201 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	YNR063W	P53749	607 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	ELA1	P53861	379 aa	Predicted RBP	4.85	□□□□□ -1.63
RPA43	YOR340C	ALD6	P54115	500 aa	Known RBP	4.85	□□□□□ -1.63
RPA43	YOR340C	VPS16	Q03308	798 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	HDA2	Q06629	674 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	LAP2	Q10740	671 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	SSM4	P40318	1319 aa		4.85	□□□□□ -1.63
RPA43	YOR340C	GCR1	P07261	785 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	CLN2	P20438	545 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	RAD27	P26793	382 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	ADD66	P36040	267 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	RDH54	P38086	958 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	HSE1	P38753	452 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	YGR045C	P53229	120 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	EST2	Q06163	884 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	BRE4	Q07660	1125 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	PIN2	Q12057	282 aa		4.84	□□□□□ -1.63
RPA43	YOR340C	IKI3	Q06706	1349 aa	Known RBP	4.83	□□□□□ -1.64
RPA43	YOR340C	HEM13	P11353	328 aa	Known RBP	4.83	□□□□□ -1.64
RPA43	YOR340C	LIP5	P32875	414 aa		4.83	□□□□□ -1.64
RPA43	YOR340C	VAC8	P39968	578 aa		4.83	□□□□□ -1.64
RPA43	YOR340C	SIW14	P53965	281 aa		4.83	□□□□□ -1.64
RPA43	YOR340C	ROD1	Q02805	837 aa		4.83	□□□□□ -1.64
RPA43	YOR340C	GIC2	Q06648	383 aa		4.83	□□□□□ -1.64
RPA43	YOR340C	RTT10	Q08924	1013 aa		4.83	□□□□□ -1.64
RPA43	YOR340C	NNK1	P36003	928 aa		4.82	□□□□□ -1.64
RPA43	YOR340C	MSH4	P40965	878 aa	Predicted RBP	4.82	□□□□□ -1.64
RPA43	YOR340C	ENT3	P47160	408 aa		4.82	□□□□□ -1.64
RPA43	YOR340C	CWC24	P53769	259 aa		4.82	□□□□□ -1.64
RPA43	YOR340C	RKM2	Q03942	479 aa		4.82	□□□□□ -1.64
RPA43	YOR340C	CDC34	P14682	295 aa		4.81	□□□□□ -1.64
RPA43	YOR340C	NFS1	P25374	497 aa		4.81	□□□□□ -1.64
RPA43	YOR340C	SMY2	P32909	740 aa	Known RBP	4.81	□□□□□ -1.64
RPA43	YOR340C	TYS1	P36421	394 aa	Known RBP	4.81	□□□□□ -1.64
RPA43	YOR340C	GNP1	P48813	663 aa		4.81	□□□□□ -1.64
RPA43	YOR340C	BUD21	Q08492	214 aa	Predicted RBP	4.81	□□□□□ -1.64
RPA43	YOR340C	TMA46	Q12000	345 aa	Known RBP	4.81	□□□□□ -1.64
RPA43	YOR340C	PDR5	P33302	1511 aa	Known RBP	4.81	□□□□□ -1.64
RPA43	YOR340C	PDR11	P40550	1411 aa		4.8	□□□□□ -1.64
RPA43	YOR340C	GCN2	P15442	1659 aa		4.8	□□□□□ -1.64
RPA43	YOR340C	CYC7	P00045	113 aa		4.8	□□□□□ -1.64
RPA43	YOR340C	MMM1	P41800	426 aa		4.8	□□□□□ -1.64
RPA43	YOR340C	MAK10	Q02197	733 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms