RNA–Protein interactions for RNA: YOL123W

HRP1, Transcript of Subunit of cleavage factor I, yeast

Gene HRP1, Length 1,605 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRP1	YOL123W	STB3	Q12427	513 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	RER2	P35196	286 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	SPL2	P38839	148 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	YJR107W	P47145	328 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	RPT4	P53549	437 aa	Known RBP	6.14	□□□□□ -1.43
HRP1	YOL123W	YPL062W	Q02781	134 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	EST2	Q06163	884 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	IRC3	Q06683	689 aa		6.14	□□□□□ -1.43
HRP1	YOL123W	DDP1	Q99321	188 aa	Known RBP	6.14	□□□□□ -1.43
HRP1	YOL123W	TAF13	P11747	167 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	COQ1	P18900	473 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	MIC60	P36112	540 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	NPR3	P38742	1146 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	EPL1	P43572	832 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	IRC4	Q03036	179 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	JIP5	Q06214	492 aa	Predicted RBP	6.13	□□□□□ -1.43
HRP1	YOL123W	LSO1	Q3E827	93 aa		6.13	□□□□□ -1.43
HRP1	YOL123W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.12	□□□□□ -1.43	not detected
HRP1	YOL123W	SDH2	P21801	266 aa		6.12	□□□□□ -1.43
HRP1	YOL123W	KRE2	P27809	442 aa		6.12	□□□□□ -1.43
HRP1	YOL123W	MET4	P32389	672 aa		6.12	□□□□□ -1.43
HRP1	YOL123W	BOI1	P38041	980 aa	Known RBP	6.12	□□□□□ -1.43
HRP1	YOL123W	HDA3	Q06623	655 aa		6.12	□□□□□ -1.43
HRP1	YOL123W	PGI1	P12709	554 aa	Known RBP	6.11	□□□□□ -1.43
HRP1	YOL123W	CAF20	P12962	161 aa	Known RBP	6.11	□□□□□ -1.43
HRP1	YOL123W	LCB1	P25045	558 aa	Known RBP	6.11	□□□□□ -1.43
HRP1	YOL123W	MCM2	P29469	868 aa		6.11	□□□□□ -1.43
HRP1	YOL123W	PTK1	P36002	662 aa	Predicted RBP	6.11	□□□□□ -1.43
HRP1	YOL123W	MRPL10	P36520	322 aa		6.11	□□□□□ -1.43
HRP1	YOL123W	PFF1	P38244	976 aa		6.11	□□□□□ -1.43
HRP1	YOL123W	UFD2	P54860	961 aa		6.11	□□□□□ -1.43
HRP1	YOL123W	RPS15	Q01855	142 aa	Known RBP	6.11	□□□□□ -1.43
HRP1	YOL123W	CHO2	P05374	869 aa	Known RBP	6.1	□□□□□ -1.43
HRP1	YOL123W	CBP3	P21560	335 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	SUV3	P32580	737 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	RPT3	P33298	428 aa	Known RBP	6.1	□□□□□ -1.43
HRP1	YOL123W	RFT1	P38206	574 aa	Predicted RBP	6.1	□□□□□ -1.43
HRP1	YOL123W	AKR1	P39010	764 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	SPR3	P41901	512 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	YFH7	P43591	353 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	UBX2	Q04228	584 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	SGD1	Q06132	899 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	PSF3	Q12146	194 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	HSP82	P02829	709 aa	Known RBP	6.1	□□□□□ -1.43
HRP1	YOL123W	GPA1	P08539	472 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	HCA4	P20448	770 aa	Known RBP	6.1	□□□□□ -1.43
HRP1	YOL123W	KIP2	P28743	706 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	MDL2	P33311	773 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	YBL086C	P38177	466 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	RPN10	P38886	268 aa	Known RBP	6.1	□□□□□ -1.43
HRP1	YOL123W	YER130C	P39959	443 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	YPT11	P48559	417 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	CTR9	P89105	1077 aa		6.1	□□□□□ -1.43
HRP1	YOL123W	CYT1	P07143	309 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	BMH2	P34730	273 aa	Known RBP	6.09	□□□□□ -1.43
HRP1	YOL123W	MPE1	P35728	441 aa	Known RBP	6.09	□□□□□ -1.43
HRP1	YOL123W	RTS1	P38903	757 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	JJJ2	P46997	583 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	SSL2	Q00578	843 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	ERO1	Q03103	563 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	MRD1	Q06106	887 aa	Known RBP	6.09	□□□□□ -1.43
HRP1	YOL123W	TFC6	Q06339	672 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	ATG20	Q07528	640 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	FLO1	P32768	1537 aa		6.09	□□□□□ -1.43
HRP1	YOL123W	SWI4	P25302	1093 aa	Known RBP	6.08	□□□□□ -1.44
HRP1	YOL123W	SMY1	P32364	656 aa	Known RBP	6.08	□□□□□ -1.44
HRP1	YOL123W	ANP1	P32629	500 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	MYO3	P36006	1272 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	YKT6	P36015	200 aa	Known RBP	6.08	□□□□□ -1.44
HRP1	YOL123W	MNN4	P36044	1178 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	PIP2	P52960	996 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	FAR11	P53917	953 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	HDA1	P53973	706 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	SYH1	Q02875	849 aa	Known RBP	6.08	□□□□□ -1.44
HRP1	YOL123W	TRS120	Q04183	1289 aa		6.08	□□□□□ -1.44
HRP1	YOL123W	HXK1	P04806	485 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	SPT2	P06843	333 aa	Predicted RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	RPS6A	P0CX37	236 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	RPS6B	P0CX38	236 aa	Predicted RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	SNF3	P10870	884 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	RGP1	P16664	663 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	EBP2	P36049	427 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	UGA2	P38067	497 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	RRM3	P38766	723 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	PTK2	P47116	818 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	VMS1	Q04311	632 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	PUS5	Q06244	254 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	TOS4	Q06266	489 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	MAG2	Q06436	670 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	WRS1	Q12109	432 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	SES1	P07284	462 aa	Known RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	MAL31	P38156	614 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	MSH4	P40965	878 aa	Predicted RBP	6.07	□□□□□ -1.44
HRP1	YOL123W	DCS2	Q12123	353 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	MNL2	Q12205	849 aa		6.07	□□□□□ -1.44
HRP1	YOL123W	CDC6	P09119	513 aa		6.06	□□□□□ -1.44
HRP1	YOL123W	CYC8	P14922	966 aa		6.06	□□□□□ -1.44
HRP1	YOL123W	RET1	P22276	1149 aa	Known RBP	6.06	□□□□□ -1.44
HRP1	YOL123W	MAK31	P23059	88 aa		6.06	□□□□□ -1.44
HRP1	YOL123W	FYV10	P40492	516 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms