RNA–Protein interactions for RNA: YNR051C

BRE5, Transcript of Ubiquitin protease cofactor, yeastyeast

Gene BRE5, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE5YNR051C CNN1P43618 361 aa4.3□□□□□ -1.72
BRE5YNR051C TIM54P47045 478 aa4.3□□□□□ -1.72
BRE5YNR051C TIF35Q04067 274 aaKnown RBP4.3□□□□□ -1.72
BRE5YNR051C PTC5Q12511 572 aa4.3□□□□□ -1.72
BRE5YNR051C DBP5P20449 482 aaKnown RBP4.29□□□□□ -1.72
BRE5YNR051C SBA1P28707 216 aaKnown RBP4.29□□□□□ -1.72
BRE5YNR051C ALG3P38179 458 aa4.29□□□□□ -1.72
BRE5YNR051C YGR045CP53229 120 aa4.29□□□□□ -1.72
BRE5YNR051C NCE103P53615 221 aa4.29□□□□□ -1.72
BRE5YNR051C ELA1P53861 379 aaPredicted RBP4.29□□□□□ -1.72
BRE5YNR051C DOT1Q04089 582 aaKnown RBP4.29□□□□□ -1.72
BRE5YNR051C BDF2Q07442 638 aa4.29□□□□□ -1.72
BRE5YNR051C SPO75Q07798 868 aa4.29□□□□□ -1.72
BRE5YNR051C GCD1P09032 578 aaPredicted RBP4.28□□□□□ -1.72
BRE5YNR051C NFS1P25374 497 aa4.28□□□□□ -1.72
BRE5YNR051C YKL107WP34251 309 aa4.28□□□□□ -1.72
BRE5YNR051C MRP8P35719 219 aa4.28□□□□□ -1.72
BRE5YNR051C YBR184WP38299 523 aa4.28□□□□□ -1.72
BRE5YNR051C VPS53P47061 822 aa4.28□□□□□ -1.72
BRE5YNR051C HUL5P53119 910 aa4.28□□□□□ -1.72
BRE5YNR051C SHE9Q04172 456 aa4.28□□□□□ -1.72
BRE5YNR051C ESC2Q06340 456 aa4.28□□□□□ -1.72
BRE5YNR051C OSH2Q12451 1283 aa4.28□□□□□ -1.72
BRE5YNR051C RKM4Q12504 494 aa4.28□□□□□ -1.72
BRE5YNR051C PUF4P25339 888 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
BRE5YNR051C YCR015CP25616 317 aa4.27□□□□□ -1.73
BRE5YNR051C AFG2P32794 780 aa4.27□□□□□ -1.73
BRE5YNR051C PPG1P32838 368 aa4.27□□□□□ -1.73
BRE5YNR051C PIN4P34217 668 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
BRE5YNR051C VBA5P36172 582 aa4.27□□□□□ -1.73
BRE5YNR051C TAT2P38967 592 aa4.27□□□□□ -1.73
BRE5YNR051C IRR1P40541 1150 aa4.27□□□□□ -1.73
BRE5YNR051C YGL176CP46945 554 aa4.27□□□□□ -1.73
BRE5YNR051C HNT2P49775 206 aa4.27□□□□□ -1.73
BRE5YNR051C RPN4Q03465 531 aa4.27□□□□□ -1.73
BRE5YNR051C RET1P22276 1149 aaKnown RBP4.26□□□□□ -1.73
BRE5YNR051C MLS1P30952 554 aa4.26□□□□□ -1.73
BRE5YNR051C NNK1P36003 928 aa4.26□□□□□ -1.73
BRE5YNR051C RGD1P38339 666 aa4.26□□□□□ -1.73
BRE5YNR051C RNH70P53331 553 aa4.26□□□□□ -1.73
BRE5YNR051C STE5P32917 917 aa4.26□□□□□ -1.73
BRE5YNR051C GPT2P36148 743 aa4.26□□□□□ -1.73
BRE5YNR051C QNS1P38795 714 aaKnown RBP4.26□□□□□ -1.73
BRE5YNR051C NMD2P38798 1089 aaKnown RBP4.26□□□□□ -1.73
BRE5YNR051C NIT1P40447 199 aa4.26□□□□□ -1.73
BRE5YNR051C YGR125WP53273 1036 aa4.26□□□□□ -1.73
BRE5YNR051C RSA3Q05942 220 aaKnown RBP4.26□□□□□ -1.73
BRE5YNR051C GIC2Q06648 383 aa4.26□□□□□ -1.73
BRE5YNR051C DFG16Q99234 619 aa4.26□□□□□ -1.73
BRE5YNR051C GAS1P22146 559 aaKnown RBP4.25□□□□□ -1.73
BRE5YNR051C SMY2P32909 740 aaKnown RBP4.25□□□□□ -1.73
BRE5YNR051C PBP2P38151 413 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
BRE5YNR051C PBY1P38254 753 aa4.25□□□□□ -1.73
BRE5YNR051C MPH1P40562 993 aa4.25□□□□□ -1.73
BRE5YNR051C ECL1P48235 211 aa4.25□□□□□ -1.73
BRE5YNR051C YLR257WQ06146 321 aaKnown RBP4.25□□□□□ -1.73
BRE5YNR051C FLC1Q08967 793 aa4.25□□□□□ -1.73
BRE5YNR051C YPL260WQ08977 551 aa4.25□□□□□ -1.73
BRE5YNR051C CIT2P08679 460 aa4.24□□□□□ -1.73
BRE5YNR051C HSP60P19882 572 aaKnown RBP4.24□□□□□ -1.73
BRE5YNR051C ARE1P25628 610 aa4.24□□□□□ -1.73
BRE5YNR051C MSH4P40965 878 aaPredicted RBP4.24□□□□□ -1.73
BRE5YNR051C ERP6P53198 216 aa4.24□□□□□ -1.73
BRE5YNR051C EAF1Q06337 982 aa4.24□□□□□ -1.73
BRE5YNR051C HRK1Q08732 759 aaKnown RBP4.24□□□□□ -1.73
BRE5YNR051C GNT1Q12096 491 aa4.24□□□□□ -1.73
BRE5YNR051C YPL066WQ12194 479 aa4.24□□□□□ -1.73
BRE5YNR051C PRP9P19736 530 aaKnown RBP4.23□□□□□ -1.73
BRE5YNR051C KIP1P28742 1111 aa4.23□□□□□ -1.73
BRE5YNR051C RPL8BP29453 256 aaKnown RBP4.23□□□□□ -1.73
BRE5YNR051C BRN1P38170 754 aa4.23□□□□□ -1.73
BRE5YNR051C MBP1P39678 833 aa4.23□□□□□ -1.73
BRE5YNR051C CHZ1P40019 153 aaPredicted RBP4.23□□□□□ -1.73
BRE5YNR051C SPP382Q06411 708 aaPredicted RBP4.23□□□□□ -1.73
BRE5YNR051C FMP25Q08023 583 aa4.23□□□□□ -1.73
BRE5YNR051C ESC8Q08119 714 aa4.23□□□□□ -1.73
BRE5YNR051C SPO21Q12411 609 aa4.23□□□□□ -1.73
BRE5YNR051C YHR020WP38708 688 aaKnown RBP4.22□□□□□ -1.73
BRE5YNR051C GGA2P38817 585 aaKnown RBP4.22□□□□□ -1.73
BRE5YNR051C NMD3P38861 518 aaKnown RBP4.22□□□□□ -1.73
BRE5YNR051C RSP5P39940 809 aaKnown RBP4.22□□□□□ -1.73
BRE5YNR051C HUL4P40985 892 aa4.22□□□□□ -1.73
BRE5YNR051C BUD6P41697 788 aa4.22□□□□□ -1.73
BRE5YNR051C ALR2P43553 858 aa4.22□□□□□ -1.73
BRE5YNR051C TAF1P46677 1066 aa4.22□□□□□ -1.73
BRE5YNR051C PRP43P53131 767 aaKnown RBP4.22□□□□□ -1.73
BRE5YNR051C CIT1P00890 479 aa4.21□□□□□ -1.73
BRE5YNR051C RPS4AP0CX35 261 aaKnown RBP4.21□□□□□ -1.73
BRE5YNR051C RPS4BP0CX36 261 aaKnown RBP4.21□□□□□ -1.73
BRE5YNR051C GAL11P19659 1081 aa4.21□□□□□ -1.73
BRE5YNR051C GPB2P39717 880 aa4.21□□□□□ -1.73
BRE5YNR051C TPP1Q03796 238 aa4.21□□□□□ -1.73
BRE5YNR051C YER152CP10356 443 aa4.21□□□□□ -1.74
BRE5YNR051C NUP82P40368 713 aa4.21□□□□□ -1.74
BRE5YNR051C PFD1P46988 109 aa4.21□□□□□ -1.74
BRE5YNR051C YJL045WP47052 634 aa4.21□□□□□ -1.74
BRE5YNR051C ALT1P52893 592 aa4.21□□□□□ -1.74
BRE5YNR051C UTP8P53276 713 aaKnown RBP4.21□□□□□ -1.74
BRE5YNR051C TPO2P53283 614 aa4.21□□□□□ -1.74
BRE5YNR051C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms