RNA–Protein interactions for RNA: YNL186W

UBP10, Transcript of Ubiquitin-specific protease, deubiquitinates Ub-protein moieties, yeast

Gene UBP10, Length 2,379 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP10	YNL186W	Q0182	Q9ZZW1	134 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	EUG1	P32474	517 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	RIP-Chip
UBP10	YNL186W	RER2	P35196	286 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	YKL222C	P35995	705 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	PBY1	P38254	753 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	AMN1	P38285	549 aa	Predicted RBP	4.99	□□□□□ -1.61
UBP10	YNL186W	FIR1	P40020	876 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	UTP7	P40055	554 aa	Known RBP	4.99	□□□□□ -1.61
UBP10	YNL186W	PEA2	P40091	420 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	RPT2	P40327	437 aa	Known RBP	4.99	□□□□□ -1.61
UBP10	YNL186W	SUM1	P46676	1062 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	YLR225C	Q05948	407 aa	Known RBP	4.99	□□□□□ -1.61
UBP10	YNL186W	HDA2	Q06629	674 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	NUP145	P49687	1317 aa		4.99	□□□□□ -1.61
UBP10	YNL186W	PAT1	P25644	796 aa	Known RBP	4.98	□□□□□ -1.61
UBP10	YNL186W	MTC2	P34246	357 aa		4.98	□□□□□ -1.61
UBP10	YNL186W	ESF2	P53743	316 aa	Known RBP	4.98	□□□□□ -1.61
UBP10	YNL186W	MPH2	P0CD99	609 aa		4.98	□□□□□ -1.61
UBP10	YNL186W	SST2	P11972	698 aa	Known RBP	4.98	□□□□□ -1.61
UBP10	YNL186W	YEF3	P16521	1044 aa	Known RBP	4.98	□□□□□ -1.61
UBP10	YNL186W	SEC26	P41810	973 aa	Known RBP	4.98	□□□□□ -1.61
UBP10	YNL186W	BDP1	P46678	594 aa		4.98	□□□□□ -1.61
UBP10	YNL186W	UBX4	P54730	416 aa		4.98	□□□□□ -1.61
UBP10	YNL186W	PGI1	P12709	554 aa	Known RBP	4.97	□□□□□ -1.61
UBP10	YNL186W	SEC23	P15303	768 aa	Known RBP	4.97	□□□□□ -1.61
UBP10	YNL186W	MLF3	P32047	452 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	PLC1	P32383	869 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	MKS1	P34072	584 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	UGA2	P38067	497 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	BSD2	P38356	321 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	HOS4	P40480	1083 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	SAP155	P43612	1002 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	ARH1	P48360	493 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	MDM12	Q92328	271 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	LYP1	P32487	611 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	TOA1	P32773	286 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	RVS167	P39743	482 aa	Known RBP	4.97	□□□□□ -1.61
UBP10	YNL186W	KRI1	P42846	591 aa	Known RBP	4.97	□□□□□ -1.61
UBP10	YNL186W	ALR2	P43553	858 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	PEX14	P53112	341 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	YGL140C	P53120	1219 aa		4.97	□□□□□ -1.61
UBP10	YNL186W	RPS9B	P05755	195 aa	Known RBP	4.96	□□□□□ -1.62
UBP10	YNL186W	APM2	P38700	605 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	BNI4	P53858	892 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
UBP10	YNL186W	EMG1	Q06287	252 aa	Known RBP	4.96	□□□□□ -1.62
UBP10	YNL186W	GIC2	Q06648	383 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	FAP7	Q12055	197 aa	Predicted RBP	4.96	□□□□□ -1.62
UBP10	YNL186W	RPC31	P17890	251 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	VNX1	P42839	908 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	PIP2	P52960	996 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	SPC105	P53148	917 aa		4.96	□□□□□ -1.62
UBP10	YNL186W	SPT7	P35177	1332 aa		4.95	□□□□□ -1.62
UBP10	YNL186W	SPT16	P32558	1035 aa	Known RBP	4.95	□□□□□ -1.62
UBP10	YNL186W	TIF11	P38912	153 aa	Known RBP	4.95	□□□□□ -1.62
UBP10	YNL186W	GEM1	P39722	662 aa		4.95	□□□□□ -1.62
UBP10	YNL186W	MGS1	P40151	587 aa		4.95	□□□□□ -1.62
UBP10	YNL186W	ERP4	Q12450	207 aa		4.95	□□□□□ -1.62
UBP10	YNL186W	TOP3	P13099	656 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	HBS1	P32769	611 aa	Known RBP	4.94	□□□□□ -1.62
UBP10	YNL186W	SEC61	P32915	480 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	PEX28	P38848	579 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	MTR4	P47047	1073 aa	Known RBP	4.94	□□□□□ -1.62
UBP10	YNL186W	SIW14	P53965	281 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	MET14	Q02196	202 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	RRI2	Q12348	645 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	YBL029C-A	Q3E756	94 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	HBN1	Q96VH4	193 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	PYC2	P32327	1180 aa	Known RBP	4.94	□□□□□ -1.62
UBP10	YNL186W	GIP1	P38229	639 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	RSM26	P47141	266 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	SDA1	P53313	767 aa	Known RBP	4.94	□□□□□ -1.62
UBP10	YNL186W	DFG5	Q05031	458 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	YDL124W	Q07551	312 aa	Known RBP	4.94	□□□□□ -1.62
UBP10	YNL186W	YPL066W	Q12194	479 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	CMR1	Q12510	522 aa	Known RBP	4.94	□□□□□ -1.62
UBP10	YNL186W	GCN2	P15442	1659 aa		4.94	□□□□□ -1.62
UBP10	YNL186W	GAL1	P04385	528 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	RPS31	P05759	152 aa	Known RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	TFC4	P33339	1025 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	MOT2	P34909	587 aa	Known RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	TRZ1	P36159	838 aa	Predicted RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	TYS1	P36421	394 aa	Known RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	BAP2	P38084	609 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	RDH54	P38086	958 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	YBL086C	P38177	466 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	EXO84	P38261	753 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	RRP8	P38961	392 aa	Known RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	NOG1	Q02892	647 aa	Known RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	TAF13	P11747	167 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	RTG1	P32607	177 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	CCC2	P38995	1004 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	MBP1	P39678	833 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	IES1	P43579	692 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	FRK1	Q03002	865 aa	Predicted RBP	4.93	□□□□□ -1.62
UBP10	YNL186W	PUS5	Q06244	254 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	YOR296W	Q08748	1289 aa		4.93	□□□□□ -1.62
UBP10	YNL186W	PRP9	P19736	530 aa	Known RBP	4.92	□□□□□ -1.62
UBP10	YNL186W	HSP78	P33416	811 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms