RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W PRE10P21242 288 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
PEP5YMR231W PRP45P28004 379 aaPredicted RBP4.73□□□□□ -1.65
PEP5YMR231W SQT1P35184 431 aa4.73□□□□□ -1.65
PEP5YMR231W SPP381P38282 291 aaPredicted RBP4.73□□□□□ -1.65
PEP5YMR231W IES2P40154 320 aa4.73□□□□□ -1.65
PEP5YMR231W LYS14P40971 790 aa4.73□□□□□ -1.65
PEP5YMR231W NCA2Q12374 616 aa4.73□□□□□ -1.65
PEP5YMR231W HIS4P00815 799 aaKnown RBP4.72□□□□□ -1.65
PEP5YMR231W RAD51P25454 400 aa4.72□□□□□ -1.65
PEP5YMR231W SEC65P29478 273 aa4.72□□□□□ -1.65
PEP5YMR231W SEC8P32855 1065 aa4.72□□□□□ -1.65
PEP5YMR231W APL2P36000 726 aaPredicted RBP4.72□□□□□ -1.65
PEP5YMR231W RTS1P38903 757 aa4.72□□□□□ -1.65
PEP5YMR231W HXT8P40886 569 aa4.72□□□□□ -1.65
PEP5YMR231W SIL1Q08199 421 aa4.72□□□□□ -1.65
PEP5YMR231W SMC6Q12749 1114 aa4.72□□□□□ -1.65
PEP5YMR231W MIP1P15801 1254 aa4.72□□□□□ -1.65
PEP5YMR231W KAR3P17119 729 aa4.72□□□□□ -1.65
PEP5YMR231W AXL1P40851 1208 aa4.72□□□□□ -1.65
PEP5YMR231W VPS53P47061 822 aa4.72□□□□□ -1.65
PEP5YMR231W YGR021WP53212 290 aa4.72□□□□□ -1.65
PEP5YMR231W RRP15Q06511 250 aaPredicted RBP4.72□□□□□ -1.65
PEP5YMR231W TOP1P04786 769 aa4.71□□□□□ -1.65
PEP5YMR231W KRS1P15180 591 aaKnown RBP4.71□□□□□ -1.65
PEP5YMR231W MAK31P23059 88 aa4.71□□□□□ -1.65
PEP5YMR231W CDC11P32458 415 aa4.71□□□□□ -1.65
PEP5YMR231W ANP1P32629 500 aa4.71□□□□□ -1.65
PEP5YMR231W GRX7P38068 203 aa4.71□□□□□ -1.65
PEP5YMR231W EPL1P43572 832 aa4.71□□□□□ -1.65
PEP5YMR231W SGM1P47166 707 aa4.71□□□□□ -1.65
PEP5YMR231W TSR1Q07381 788 aaKnown RBP4.71□□□□□ -1.65
PEP5YMR231W YAP7Q08182 245 aa4.71□□□□□ -1.65
PEP5YMR231W AFT2Q08957 416 aa4.71□□□□□ -1.65
PEP5YMR231W RPS6AP0CX37 236 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W RPS6BP0CX38 236 aaPredicted RBP4.71□□□□□ -1.66
PEP5YMR231W TAL1P15019 335 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W ADE2P21264 571 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W VPS1P21576 704 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W APL1P27351 700 aa4.71□□□□□ -1.66
PEP5YMR231W BCK2P33306 851 aa4.71□□□□□ -1.66
PEP5YMR231W SMC2P38989 1170 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W NUP82P40368 713 aa4.71□□□□□ -1.66
PEP5YMR231W TMA22P47089 198 aaPredicted RBP4.71□□□□□ -1.66
PEP5YMR231W CUR1Q06469 252 aa4.71□□□□□ -1.66
PEP5YMR231W ATG13Q06628 738 aa4.71□□□□□ -1.66
PEP5YMR231W TFC8Q12308 588 aa4.71□□□□□ -1.66
PEP5YMR231W TUP1P16649 713 aa4.71□□□□□ -1.66
PEP5YMR231W SPB4P25808 606 aaPredicted RBP4.71□□□□□ -1.66
PEP5YMR231W ISW1P38144 1129 aa4.71□□□□□ -1.66
PEP5YMR231W HEK2P38199 381 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
PEP5YMR231W YMR1P47147 688 aaKnown RBP RIP-Chip data4.71□□□□□ -1.66not detected
PEP5YMR231W ESBP6P53918 673 aa4.71□□□□□ -1.66
PEP5YMR231W YNL058CP53947 316 aa4.71□□□□□ -1.66
PEP5YMR231W YLR287CQ05881 355 aa4.71□□□□□ -1.66
PEP5YMR231W ESF1Q06344 628 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W TUM1Q08686 304 aaKnown RBP4.71□□□□□ -1.66
PEP5YMR231W YOR111WQ99210 232 aa4.71□□□□□ -1.66
PEP5YMR231W NAM7P30771 971 aaKnown RBP4.7□□□□□ -1.66
PEP5YMR231W RAD16P31244 790 aa4.7□□□□□ -1.66
PEP5YMR231W PSE1P32337 1089 aaKnown RBP4.7□□□□□ -1.66
PEP5YMR231W TFC3P34111 1160 aa4.7□□□□□ -1.66
PEP5YMR231W SET5P38890 526 aaKnown RBP4.7□□□□□ -1.66
PEP5YMR231W YIL001WP40560 513 aa4.7□□□□□ -1.66
PEP5YMR231W ARI1P53111 347 aaKnown RBP4.7□□□□□ -1.66
PEP5YMR231W SLT2Q00772 484 aa4.7□□□□□ -1.66
PEP5YMR231W MTG1Q03151 367 aaPredicted RBP4.7□□□□□ -1.66
PEP5YMR231W NYV1Q12255 253 aa4.7□□□□□ -1.66
PEP5YMR231W TAF3Q12297 353 aa4.7□□□□□ -1.66
PEP5YMR231W CDC37P06101 506 aaKnown RBP4.7□□□□□ -1.66
PEP5YMR231W MSH3P25336 1018 aa4.7□□□□□ -1.66
PEP5YMR231W STT3P39007 718 aaKnown RBP4.7□□□□□ -1.66
PEP5YMR231W YMR187CQ03236 431 aa4.7□□□□□ -1.66
PEP5YMR231W YIG1Q08956 461 aa4.7□□□□□ -1.66
PEP5YMR231W SSB1P11484 613 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W IME1P21190 360 aa4.69□□□□□ -1.66
PEP5YMR231W ISY1P21374 235 aaPredicted RBP4.69□□□□□ -1.66
PEP5YMR231W PAP1P29468 568 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W IMP2'P32351 346 aa4.69□□□□□ -1.66
PEP5YMR231W UBC6P33296 250 aaPredicted RBP4.69□□□□□ -1.66
PEP5YMR231W TRM2P33753 639 aa4.69□□□□□ -1.66
PEP5YMR231W MRP8P35719 219 aa4.69□□□□□ -1.66
PEP5YMR231W ERG7P38604 731 aa4.69□□□□□ -1.66
PEP5YMR231W PMC1P38929 1173 aaPredicted RBP4.69□□□□□ -1.66
PEP5YMR231W BEM4P39011 633 aa4.69□□□□□ -1.66
PEP5YMR231W SAP1P39955 897 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W SSB2P40150 613 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W CCM1P48237 864 aaPredicted RBP4.69□□□□□ -1.66
PEP5YMR231W SDA1P53313 767 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W ADA2Q02336 434 aa4.69□□□□□ -1.66
PEP5YMR231W SPP382Q06411 708 aaPredicted RBP4.69□□□□□ -1.66
PEP5YMR231W RAD61Q99359 647 aa4.69□□□□□ -1.66
PEP5YMR231W VMA4P22203 233 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W SRO9P25567 434 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W CDC60P26637 1090 aaKnown RBP4.69□□□□□ -1.66
PEP5YMR231W SEC20P28791 383 aa4.69□□□□□ -1.66
PEP5YMR231W YKR075CP36155 307 aa4.69□□□□□ -1.66
PEP5YMR231W MGA2P40578 1113 aa4.69□□□□□ -1.66
PEP5YMR231W ORM2Q06144 216 aa4.69□□□□□ -1.66
PEP5YMR231W HIF1Q12373 385 aa4.69□□□□□ -1.66
PEP5YMR231W NBL1Q3E7Y6 73 aa4.69□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms