RNA–Protein interactions for RNA: YMR123W

PKR1, Transcript of V-ATPase assembly factor, yeast

Gene PKR1, Length 369 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKR1	YMR123W	PET112	P33893	541 aa		4.17	□□□□□ -1.74
PKR1	YMR123W	MNR2	P35724	969 aa		4.17	□□□□□ -1.74
PKR1	YMR123W	CCZ1	P38273	704 aa		4.17	□□□□□ -1.74
PKR1	YMR123W	GPB2	P39717	880 aa		4.17	□□□□□ -1.74
PKR1	YMR123W	NBA1	Q08229	501 aa	Known RBP	4.17	□□□□□ -1.74
PKR1	YMR123W	CDC34	P14682	295 aa		4.16	□□□□□ -1.74
PKR1	YMR123W	SNF5	P18480	905 aa		4.16	□□□□□ -1.74
PKR1	YMR123W	RER2	P35196	286 aa		4.16	□□□□□ -1.74
PKR1	YMR123W	PIK1	P39104	1066 aa		4.16	□□□□□ -1.74
PKR1	YMR123W	MPH1	P40562	993 aa		4.16	□□□□□ -1.74
PKR1	YMR123W	RCL1	Q08096	367 aa	Predicted RBP	4.16	□□□□□ -1.74
PKR1	YMR123W	NAP1	P25293	417 aa	Known RBP	4.15	□□□□□ -1.75
PKR1	YMR123W	AIM26	P32858	118 aa		4.15	□□□□□ -1.75
PKR1	YMR123W	MET10	P39692	1035 aa		4.15	□□□□□ -1.75
PKR1	YMR123W	HNT2	P49775	206 aa		4.15	□□□□□ -1.75
PKR1	YMR123W	FOL2	P51601	243 aa	Known RBP	4.15	□□□□□ -1.75
PKR1	YMR123W	ENV11	P53246	860 aa		4.15	□□□□□ -1.75
PKR1	YMR123W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
PKR1	YMR123W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	RIP-Chip
PKR1	YMR123W	MLS1	P30952	554 aa		4.14	□□□□□ -1.75
PKR1	YMR123W	LYP1	P32487	611 aa		4.14	□□□□□ -1.75
PKR1	YMR123W	TSA1	P34760	196 aa	Known RBP	4.14	□□□□□ -1.75
PKR1	YMR123W	PRP43	P53131	767 aa	Known RBP	4.14	□□□□□ -1.75
PKR1	YMR123W	EEB1	Q02891	456 aa		4.14	□□□□□ -1.75
PKR1	YMR123W	TIF35	Q04067	274 aa	Known RBP	4.14	□□□□□ -1.75
PKR1	YMR123W	CDA2	Q06703	312 aa		4.14	□□□□□ -1.75
PKR1	YMR123W	YDL177C	Q12257	170 aa		4.14	□□□□□ -1.75
PKR1	YMR123W	TRP2	P00899	507 aa	Known RBP	4.13	□□□□□ -1.75
PKR1	YMR123W	SPS1	P08458	490 aa		4.13	□□□□□ -1.75
PKR1	YMR123W	YER152C	P10356	443 aa		4.13	□□□□□ -1.75
PKR1	YMR123W	GAS1	P22146	559 aa	Known RBP	4.13	□□□□□ -1.75
PKR1	YMR123W	RNQ1	P25367	405 aa		4.13	□□□□□ -1.75
PKR1	YMR123W	SVF1	Q05515	481 aa		4.13	□□□□□ -1.75
PKR1	YMR123W	GNT1	Q12096	491 aa		4.13	□□□□□ -1.75
PKR1	YMR123W	ETP1	P38748	585 aa	Known RBP	4.12	□□□□□ -1.75
PKR1	YMR123W	SEC26	P41810	973 aa	Known RBP	4.12	□□□□□ -1.75
PKR1	YMR123W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
PKR1	YMR123W	MCM7	P38132	845 aa		4.11	□□□□□ -1.75
PKR1	YMR123W	MRPL22	P53881	309 aa		4.11	□□□□□ -1.75
PKR1	YMR123W	RSB1	Q08417	382 aa		4.11	□□□□□ -1.75
PKR1	YMR123W	CLN2	P20438	545 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	UBP5	P39944	805 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	YFL054C	P43549	646 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	TYW3	P53177	273 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	SNU71	P53207	620 aa	Known RBP	4.1	□□□□□ -1.75
PKR1	YMR123W	YGR053C	P53234	283 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	SNO2	P53823	222 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	PIN2	Q12057	282 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	RKM4	Q12504	494 aa		4.1	□□□□□ -1.75
PKR1	YMR123W	RPL11A	P0C0W9	174 aa	Known RBP	4.09	□□□□□ -1.75
PKR1	YMR123W	INO1	P11986	533 aa		4.09	□□□□□ -1.75
PKR1	YMR123W	PRP6	P19735	899 aa	Predicted RBP	4.09	□□□□□ -1.75
PKR1	YMR123W	VPS16	Q03308	798 aa		4.09	□□□□□ -1.75
PKR1	YMR123W	ATG13	Q06628	738 aa		4.09	□□□□□ -1.75
PKR1	YMR123W	RPL11B	Q3E757	174 aa	Predicted RBP	4.09	□□□□□ -1.75
PKR1	YMR123W	ABZ1	P37254	787 aa	Predicted RBP	4.08	□□□□□ -1.76
PKR1	YMR123W	PNT1	P38969	423 aa		4.08	□□□□□ -1.76
PKR1	YMR123W	GEM1	P39722	662 aa		4.08	□□□□□ -1.76
PKR1	YMR123W	MAD1	P40957	749 aa		4.08	□□□□□ -1.76
PKR1	YMR123W	FAA4	P47912	694 aa	Known RBP	4.08	□□□□□ -1.76
PKR1	YMR123W	RIM8	P53179	542 aa		4.08	□□□□□ -1.76
PKR1	YMR123W	SPO20	Q04359	397 aa		4.08	□□□□□ -1.76
PKR1	YMR123W	ACM1	Q08981	209 aa		4.08	□□□□□ -1.76
PKR1	YMR123W	SOD2	P00447	233 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	SLA2	P33338	968 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	YKL107W	P34251	309 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	MOT2	P34909	587 aa	Known RBP	4.07	□□□□□ -1.76
PKR1	YMR123W	THI80	P35202	319 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	UGA2	P38067	497 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	RFC5	P38251	354 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	SNF7	P39929	240 aa	Known RBP	4.07	□□□□□ -1.76
PKR1	YMR123W	MXR1	P40029	184 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	KRI1	P42846	591 aa	Known RBP	4.07	□□□□□ -1.76
PKR1	YMR123W	SPP382	Q06411	708 aa	Predicted RBP	4.07	□□□□□ -1.76
PKR1	YMR123W	YPL066W	Q12194	479 aa		4.07	□□□□□ -1.76
PKR1	YMR123W	THS1	P04801	734 aa	Known RBP	4.06	□□□□□ -1.76
PKR1	YMR123W	DBP2	P24783	546 aa	Known RBP	4.06	□□□□□ -1.76
PKR1	YMR123W	AIM3	P38266	947 aa	Known RBP	4.06	□□□□□ -1.76
PKR1	YMR123W	RRT14	P40470	206 aa		4.06	□□□□□ -1.76
PKR1	YMR123W	GDE1	Q02979	1223 aa		4.06	□□□□□ -1.76
PKR1	YMR123W	RSM24	Q03976	319 aa		4.06	□□□□□ -1.76
PKR1	YMR123W	SIZ1	Q04195	904 aa		4.06	□□□□□ -1.76
PKR1	YMR123W	SGD1	Q06132	899 aa		4.06	□□□□□ -1.76
PKR1	YMR123W	JIP5	Q06214	492 aa	Predicted RBP	4.06	□□□□□ -1.76
PKR1	YMR123W	SVS1	Q12254	260 aa		4.06	□□□□□ -1.76
PKR1	YMR123W	RIB2	Q12362	591 aa	Known RBP	4.06	□□□□□ -1.76
PKR1	YMR123W	CYC1	P00044	109 aa	Predicted RBP	4.05	□□□□□ -1.76
PKR1	YMR123W	ACE2	P21192	770 aa		4.05	□□□□□ -1.76
PKR1	YMR123W	PAM1	P37304	830 aa	Known RBP	4.05	□□□□□ -1.76
PKR1	YMR123W	SIP5	P40210	489 aa	Known RBP	4.05	□□□□□ -1.76
PKR1	YMR123W	YGL176C	P46945	554 aa		4.05	□□□□□ -1.76
PKR1	YMR123W	YDR132C	Q03900	495 aa		4.05	□□□□□ -1.76
PKR1	YMR123W	YLR225C	Q05948	407 aa	Known RBP	4.05	□□□□□ -1.76
PKR1	YMR123W	YPL277C	Q08989	487 aa		4.05	□□□□□ -1.76
PKR1	YMR123W	BI4	P03879	638 aa		4.04	□□□□□ -1.76
PKR1	YMR123W	RPS13	P05756	151 aa	Known RBP	4.04	□□□□□ -1.76
PKR1	YMR123W	KIN2	P13186	1147 aa	Known RBP	4.04	□□□□□ -1.76
PKR1	YMR123W	AGP1	P25376	633 aa		4.04	□□□□□ -1.76
PKR1	YMR123W	SBA1	P28707	216 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms