RNA–Protein interactions for RNA: YLR248W

RCK2, Transcript of Protein kinase involved in response to oxidative and osmotic stress, yeast

Gene RCK2, Length 1,833 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCK2	YLR248W	RRT14	P40470	206 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	BIO5	P53744	561 aa	Known RBP	5.69	□□□□□ -1.5
RCK2	YLR248W	YNL050C	P53952	270 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	BDF2	Q07442	638 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	CIT2	P08679	460 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	GRX1	P25373	110 aa	Known RBP	5.69	□□□□□ -1.5
RCK2	YLR248W	SPC42	P36094	363 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	PRK1	P40494	810 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	BUD6	P41697	788 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	GYP7	P48365	746 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	SCW11	P53189	542 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	DOS2	P54858	310 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	HEH2	Q03281	663 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	RPN4	Q03465	531 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	HDA2	Q06629	674 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	OPI10	Q08202	246 aa		5.69	□□□□□ -1.5
RCK2	YLR248W	PRI2	P20457	528 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	PRP45	P28004	379 aa	Predicted RBP	5.68	□□□□□ -1.5
RCK2	YLR248W	HSP104	P31539	908 aa	Known RBP	5.68	□□□□□ -1.5
RCK2	YLR248W	EXO5	P38289	585 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	ROG3	P43602	733 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	YJL181W	P46987	611 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	RSM26	P47141	266 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	CUZ1	P53899	274 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	TY1A-MR1	Q04215	440 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	YLR346C	Q06139	101 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	MRL1	Q06815	381 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	SLM3	Q12093	417 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	REC8	Q12188	680 aa		5.68	□□□□□ -1.5
RCK2	YLR248W	MSH3	P25336	1018 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	SPF1	P39986	1215 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	ZDS1	P50111	915 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-DR2	Q03964	440 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	RSC2	Q06488	889 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	URB1	P34241	1764 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	RPP1A	P05318	106 aa	Predicted RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-DR6	P0CX70	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-ER1	P0CX71	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-LR2	P0CX72	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-PL	P0CX73	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-JR1	P0CX74	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-LR3	P0CX75	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-ML2	P0CX76	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	SRP40	P32583	406 aa	Predicted RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	YJR124C	P47159	448 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	RNH70	P53331	553 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	YNR065C	P53751	1116 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	SRT1	Q03175	343 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	SOG2	Q08817	791 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-GR1	Q12085	440 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	TY1A-OL	Q92392	440 aa	Known RBP	5.67	□□□□□ -1.5
RCK2	YLR248W	FKS3	Q04952	1785 aa		5.67	□□□□□ -1.5
RCK2	YLR248W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
RCK2	YLR248W	YKL091C	P33324	310 aa	Known RBP	5.66	□□□□□ -1.5
RCK2	YLR248W	SQT1	P35184	431 aa		5.66	□□□□□ -1.5
RCK2	YLR248W	NMD2	P38798	1089 aa	Known RBP	5.66	□□□□□ -1.5
RCK2	YLR248W	MAM1	P40065	302 aa		5.66	□□□□□ -1.5
RCK2	YLR248W	KRE33	P53914	1056 aa	Known RBP	5.66	□□□□□ -1.5
RCK2	YLR248W	PPM2	Q08282	695 aa		5.66	□□□□□ -1.5
RCK2	YLR248W	OPY1	P38271	328 aa		5.65	□□□□□ -1.5
RCK2	YLR248W	LSB6	P42951	607 aa		5.65	□□□□□ -1.5
RCK2	YLR248W	PEX13	P80667	386 aa		5.65	□□□□□ -1.5
RCK2	YLR248W	LCB5	Q06147	687 aa	Known RBP	5.65	□□□□□ -1.5
RCK2	YLR248W	AOS1	Q06624	347 aa		5.65	□□□□□ -1.5
RCK2	YLR248W	YDR461C-A	Q2V2P7	80 aa		5.65	□□□□□ -1.5
RCK2	YLR248W	COQ4	O13525	335 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	HTS1	P07263	546 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
RCK2	YLR248W	BRN1	P38170	754 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	SIW14	P53965	281 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	YMR265C	Q03508	461 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	BMS1	Q08965	1183 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	CDC53	Q12018	815 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	TAF13	P11747	167 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	MET22	P32179	357 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	IME2	P32581	645 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	STE5	P32917	917 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	YHR020W	P38708	688 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	YFR016C	P43597	1233 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	LYS5	P50113	272 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	HUL5	P53119	910 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	CSI1	Q04368	295 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	ESC2	Q06340	456 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	TDA5	Q06417	326 aa	Known RBP	5.64	□□□□□ -1.51
RCK2	YLR248W	SYT1	Q06836	1226 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	EDE1	P34216	1381 aa		5.64	□□□□□ -1.51
RCK2	YLR248W	TRP2	P00899	507 aa	Known RBP	5.63	□□□□□ -1.51
RCK2	YLR248W	RAD4	P14736	754 aa		5.63	□□□□□ -1.51
RCK2	YLR248W	FPS1	P23900	669 aa		5.63	□□□□□ -1.51
RCK2	YLR248W	RER2	P35196	286 aa		5.63	□□□□□ -1.51
RCK2	YLR248W	SEA4	P38164	1038 aa		5.63	□□□□□ -1.51
RCK2	YLR248W	CTF4	Q01454	927 aa		5.63	□□□□□ -1.51
RCK2	YLR248W	GCR2	Q01722	534 aa		5.63	□□□□□ -1.51
RCK2	YLR248W	TMA46	Q12000	345 aa	Known RBP	5.63	□□□□□ -1.51
RCK2	YLR248W	FAL1	Q12099	399 aa	Known RBP	5.63	□□□□□ -1.51
RCK2	YLR248W	YIR014W	P40570	242 aa		5.62	□□□□□ -1.51
RCK2	YLR248W	HAS1	Q03532	505 aa	Known RBP	5.62	□□□□□ -1.51
RCK2	YLR248W	NEM1	P38757	446 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 288.9 ms