RNA–Protein interactions for RNA: YKR081C

RPF2, Transcript of Essential protein involved in rRNA maturation and ribosomal assembly, yeastyeast

Gene RPF2, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF2YKR081C PET112P33893 541 aa6.63□□□□□ -1.35
RPF2YKR081C THI80P35202 319 aa6.63□□□□□ -1.35
RPF2YKR081C TAF1P46677 1066 aa6.63□□□□□ -1.35
RPF2YKR081C RAT1Q02792 1006 aaKnown RBP6.63□□□□□ -1.35
RPF2YKR081C YPL260WQ08977 551 aa6.63□□□□□ -1.35
RPF2YKR081C SRO9P25567 434 aaKnown RBP6.62□□□□□ -1.35
RPF2YKR081C YSC84P32793 468 aa6.62□□□□□ -1.35
RPF2YKR081C TMA46Q12000 345 aaKnown RBP6.62□□□□□ -1.35
RPF2YKR081C YDL177CQ12257 170 aa6.62□□□□□ -1.35
RPF2YKR081C SYP1P25623 870 aaKnown RBP6.61□□□□□ -1.35
RPF2YKR081C MNR2P35724 969 aa6.61□□□□□ -1.35
RPF2YKR081C NAP1P25293 417 aaKnown RBP6.6□□□□□ -1.35
RPF2YKR081C RGD1P38339 666 aa6.6□□□□□ -1.35
RPF2YKR081C CNN1P43618 361 aa6.6□□□□□ -1.35
RPF2YKR081C SNO2P53823 222 aa6.6□□□□□ -1.35
RPF2YKR081C NBA1Q08229 501 aaKnown RBP6.6□□□□□ -1.35
RPF2YKR081C COQ4O13525 335 aa6.59□□□□□ -1.35
RPF2YKR081C DBP5P20449 482 aaKnown RBP6.59□□□□□ -1.35
RPF2YKR081C GPB2P39717 880 aa6.59□□□□□ -1.35
RPF2YKR081C RPN3P40016 523 aaKnown RBP6.59□□□□□ -1.35
RPF2YKR081C RIM8P53179 542 aa6.59□□□□□ -1.35
RPF2YKR081C SVF1Q05515 481 aa6.59□□□□□ -1.35
RPF2YKR081C YOR352WQ08816 343 aa6.59□□□□□ -1.35
RPF2YKR081C SPO21Q12411 609 aa6.59□□□□□ -1.35
RPF2YKR081C CDC34P14682 295 aa6.58□□□□□ -1.36
RPF2YKR081C DUT1P33317 147 aa6.58□□□□□ -1.36
RPF2YKR081C TOD6P34219 525 aa6.58□□□□□ -1.36
RPF2YKR081C RER2P35196 286 aa6.58□□□□□ -1.36
RPF2YKR081C TNA1P53322 534 aa6.58□□□□□ -1.36
RPF2YKR081C HOS3Q02959 697 aaKnown RBP6.58□□□□□ -1.36
RPF2YKR081C SPS1P08458 490 aa6.57□□□□□ -1.36
RPF2YKR081C CCZ1P38273 704 aa6.57□□□□□ -1.36
RPF2YKR081C SNU71P53207 620 aaKnown RBP6.57□□□□□ -1.36
RPF2YKR081C RPS13P05756 151 aaKnown RBP6.56□□□□□ -1.36
RPF2YKR081C BAP2P38084 609 aa6.56□□□□□ -1.36
RPF2YKR081C FLR1P38124 548 aa6.56□□□□□ -1.36
RPF2YKR081C MET10P39692 1035 aa6.56□□□□□ -1.36
RPF2YKR081C HNT2P49775 206 aa6.56□□□□□ -1.36
RPF2YKR081C RSC58Q07979 502 aa6.56□□□□□ -1.36
RPF2YKR081C YPL277CQ08989 487 aa6.56□□□□□ -1.36
RPF2YKR081C MLS1P30952 554 aa6.55□□□□□ -1.36
RPF2YKR081C SOD2P00447 233 aa6.54□□□□□ -1.36
RPF2YKR081C CLN2P20438 545 aa6.54□□□□□ -1.36
RPF2YKR081C PUF4P25339 888 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36 RIP-Chip
RPF2YKR081C LYP1P32487 611 aa6.54□□□□□ -1.36
RPF2YKR081C PIK1P39104 1066 aa6.54□□□□□ -1.36
RPF2YKR081C MPH1P40562 993 aa6.54□□□□□ -1.36
RPF2YKR081C TIF35Q04067 274 aaKnown RBP6.54□□□□□ -1.36
RPF2YKR081C SNF5P18480 905 aa6.53□□□□□ -1.36
RPF2YKR081C RCL1Q08096 367 aaPredicted RBP6.53□□□□□ -1.36
RPF2YKR081C RSB1Q08417 382 aa6.53□□□□□ -1.36
RPF2YKR081C TRP2P00899 507 aaKnown RBP6.52□□□□□ -1.37
RPF2YKR081C YER152CP10356 443 aa6.52□□□□□ -1.37
RPF2YKR081C MCM7P38132 845 aa6.52□□□□□ -1.37
RPF2YKR081C EEB1Q02891 456 aa6.52□□□□□ -1.37
RPF2YKR081C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
RPF2YKR081C GNT1Q12096 491 aa6.52□□□□□ -1.37
RPF2YKR081C MAD1P40957 749 aa6.51□□□□□ -1.37
RPF2YKR081C TYW3P53177 273 aa6.51□□□□□ -1.37
RPF2YKR081C ENV11P53246 860 aa6.51□□□□□ -1.37
RPF2YKR081C JIP5Q06214 492 aaPredicted RBP6.5□□□□□ -1.37
RPF2YKR081C PIN2Q12057 282 aa6.5□□□□□ -1.37
RPF2YKR081C YLR358CO13565 187 aa6.49□□□□□ -1.37
RPF2YKR081C YGR053CP53234 283 aa6.49□□□□□ -1.37
RPF2YKR081C VPS16Q03308 798 aa6.49□□□□□ -1.37
RPF2YKR081C SPO20Q04359 397 aa6.49□□□□□ -1.37
RPF2YKR081C RKM4Q12504 494 aa6.48□□□□□ -1.37
RPF2YKR081C INO1P11986 533 aa6.47□□□□□ -1.37
RPF2YKR081C SEC26P41810 973 aaKnown RBP6.47□□□□□ -1.37
RPF2YKR081C KRI1P42846 591 aaKnown RBP6.47□□□□□ -1.37
RPF2YKR081C FAA4P47912 694 aaKnown RBP6.47□□□□□ -1.37
RPF2YKR081C GDE1Q02979 1223 aa6.47□□□□□ -1.37
RPF2YKR081C YFL054CP43549 646 aa6.46□□□□□ -1.38
RPF2YKR081C SPT20P50875 604 aa6.46□□□□□ -1.38
RPF2YKR081C CWC24P53769 259 aa6.46□□□□□ -1.38
RPF2YKR081C SGD1Q06132 899 aa6.46□□□□□ -1.38
RPF2YKR081C BAS1P22035 811 aa6.45□□□□□ -1.38
RPF2YKR081C MOT2P34909 587 aaKnown RBP6.45□□□□□ -1.38
RPF2YKR081C SNF7P39929 240 aaKnown RBP6.45□□□□□ -1.38
RPF2YKR081C SPP382Q06411 708 aaPredicted RBP6.45□□□□□ -1.38
RPF2YKR081C CYC1P00044 109 aaPredicted RBP6.44□□□□□ -1.38
RPF2YKR081C RPL11AP0C0W9 174 aaKnown RBP6.44□□□□□ -1.38
RPF2YKR081C YKL107WP34251 309 aa6.44□□□□□ -1.38
RPF2YKR081C PAM1P37304 830 aaKnown RBP6.44□□□□□ -1.38
RPF2YKR081C ROT1Q03691 256 aa6.44□□□□□ -1.38
RPF2YKR081C ACM1Q08981 209 aa6.44□□□□□ -1.38
RPF2YKR081C RPL11BQ3E757 174 aaPredicted RBP6.44□□□□□ -1.38
RPF2YKR081C LAM1P38851 1228 aa6.43□□□□□ -1.38
RPF2YKR081C PNT1P38969 423 aa6.43□□□□□ -1.38
RPF2YKR081C GEM1P39722 662 aa6.43□□□□□ -1.38
RPF2YKR081C YGL176CP46945 554 aa6.43□□□□□ -1.38
RPF2YKR081C YLR225CQ05948 407 aaKnown RBP6.43□□□□□ -1.38
RPF2YKR081C YPL066WQ12194 479 aa6.43□□□□□ -1.38
RPF2YKR081C SHM2P37291 469 aaKnown RBP6.42□□□□□ -1.38
RPF2YKR081C RFC5P38251 354 aa6.42□□□□□ -1.38
RPF2YKR081C MEF2P39677 819 aa6.42□□□□□ -1.38
RPF2YKR081C MXR1P40029 184 aa6.42□□□□□ -1.38
RPF2YKR081C CLU1Q03690 1277 aaKnown RBP6.42□□□□□ -1.38
RPF2YKR081C ATG13Q06628 738 aa6.42□□□□□ -1.38
RPF2YKR081C FAL1Q12099 399 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms