RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeastyeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DOA1YKL213C CIT1P00890 479 aa5.46□□□□□ -1.54
DOA1YKL213C MET6P05694 767 aaKnown RBP5.46□□□□□ -1.54
DOA1YKL213C VMA4P22203 233 aaKnown RBP5.46□□□□□ -1.54
DOA1YKL213C PRX1P34227 261 aaKnown RBP5.46□□□□□ -1.54
DOA1YKL213C LSB1P53281 241 aa5.46□□□□□ -1.54
DOA1YKL213C ESF2P53743 316 aaKnown RBP5.46□□□□□ -1.54
DOA1YKL213C UTP4Q06679 776 aaKnown RBP5.46□□□□□ -1.54
DOA1YKL213C TY4A-HQ6Q5P6 413 aa5.46□□□□□ -1.54
DOA1YKL213C EUG1P32474 517 aa5.45□□□□□ -1.54
DOA1YKL213C VPS24P36095 224 aaKnown RBP5.45□□□□□ -1.54
DOA1YKL213C RFC5P38251 354 aa5.45□□□□□ -1.54
DOA1YKL213C PHO88P38264 188 aaPredicted RBP5.45□□□□□ -1.54
DOA1YKL213C PEX14P53112 341 aa5.45□□□□□ -1.54
DOA1YKL213C VPS62P53285 467 aa5.45□□□□□ -1.54
DOA1YKL213C HRQ1Q05549 1077 aa5.45□□□□□ -1.54
DOA1YKL213C GGA1Q06336 557 aa5.45□□□□□ -1.54
DOA1YKL213C RRP15Q06511 250 aaPredicted RBP5.45□□□□□ -1.54
DOA1YKL213C SUE1Q06524 206 aa5.45□□□□□ -1.54
DOA1YKL213C YPR172WQ06608 200 aa5.45□□□□□ -1.54
DOA1YKL213C YVC1Q12324 675 aa5.45□□□□□ -1.54
DOA1YKL213C RAD18P10862 487 aa5.45□□□□□ -1.54
DOA1YKL213C STI1P15705 589 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
DOA1YKL213C VMA2P16140 517 aaKnown RBP5.45□□□□□ -1.54
DOA1YKL213C PKC1P24583 1151 aa5.45□□□□□ -1.54
DOA1YKL213C RPL5P26321 297 aaKnown RBP5.45□□□□□ -1.54
DOA1YKL213C IME2P32581 645 aa5.45□□□□□ -1.54
DOA1YKL213C PMC1P38929 1173 aaPredicted RBP5.45□□□□□ -1.54
DOA1YKL213C BNI5P53890 448 aaKnown RBP5.45□□□□□ -1.54
DOA1YKL213C VIP1Q06685 1146 aaKnown RBP5.45□□□□□ -1.54
DOA1YKL213C MYO1P08964 1928 aa5.44□□□□□ -1.54
DOA1YKL213C CDC6P09119 513 aa5.44□□□□□ -1.54
DOA1YKL213C RPL8AP17076 256 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C PWP2P25635 923 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C LDH1P38139 375 aa5.44□□□□□ -1.54
DOA1YKL213C MUM2P38236 366 aa5.44□□□□□ -1.54
DOA1YKL213C SIC1P38634 284 aa5.44□□□□□ -1.54
DOA1YKL213C OCA5P38738 679 aa5.44□□□□□ -1.54
DOA1YKL213C CCT3P39077 534 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C TPM2P40414 161 aa5.44□□□□□ -1.54
DOA1YKL213C YGL138CP53122 345 aa5.44□□□□□ -1.54
DOA1YKL213C MAK11P20484 414 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C VPS1P21576 704 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C RPC82P32349 654 aa5.44□□□□□ -1.54
DOA1YKL213C MAL33P38157 468 aa5.44□□□□□ -1.54
DOA1YKL213C BDH2P39713 417 aa5.44□□□□□ -1.54
DOA1YKL213C FAF1P40546 346 aaPredicted RBP5.44□□□□□ -1.54
DOA1YKL213C ASE1P50275 885 aa5.44□□□□□ -1.54
DOA1YKL213C NAF1P53919 492 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C ALD6P54115 500 aaKnown RBP5.44□□□□□ -1.54
DOA1YKL213C GIS4Q04233 774 aa5.44□□□□□ -1.54
DOA1YKL213C JIP5Q06214 492 aaPredicted RBP5.44□□□□□ -1.54
DOA1YKL213C ICL2Q12031 575 aa5.44□□□□□ -1.54
DOA1YKL213C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
DOA1YKL213C CEX1Q12453 761 aa5.44□□□□□ -1.54
DOA1YKL213C PGI1P12709 554 aaKnown RBP5.43□□□□□ -1.54
DOA1YKL213C GPB2P39717 880 aa5.43□□□□□ -1.54
DOA1YKL213C MXR1P40029 184 aa5.43□□□□□ -1.54
DOA1YKL213C HST1P53685 503 aa5.43□□□□□ -1.54
DOA1YKL213C MET7Q08645 548 aa5.43□□□□□ -1.54
DOA1YKL213C DCS2Q12123 353 aa5.43□□□□□ -1.54
DOA1YKL213C GET3Q12154 354 aaKnown RBP5.43□□□□□ -1.54
DOA1YKL213C GLE1Q12315 538 aa5.43□□□□□ -1.54
DOA1YKL213C YOR131CQ12486 218 aa5.43□□□□□ -1.54
DOA1YKL213C SAM1P10659 382 aaKnown RBP5.42□□□□□ -1.54
DOA1YKL213C PRE10P21242 288 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
DOA1YKL213C RDS1P25611 832 aa5.42□□□□□ -1.54
DOA1YKL213C TGL1P34163 548 aa5.42□□□□□ -1.54
DOA1YKL213C SAS3P34218 831 aa5.42□□□□□ -1.54
DOA1YKL213C NDT80P38830 627 aa5.42□□□□□ -1.54
DOA1YKL213C FMS1P50264 508 aa5.42□□□□□ -1.54
DOA1YKL213C BRE5P53741 515 aaKnown RBP5.42□□□□□ -1.54
DOA1YKL213C DUS4Q06063 367 aa5.42□□□□□ -1.54
DOA1YKL213C SGT2Q12118 346 aaKnown RBP5.42□□□□□ -1.54
DOA1YKL213C ERP4Q12450 207 aa5.42□□□□□ -1.54
DOA1YKL213C MBR1P23493 339 aa5.42□□□□□ -1.54
DOA1YKL213C YKR018CP36114 725 aa5.42□□□□□ -1.54
DOA1YKL213C YKR023WP36119 530 aaKnown RBP5.42□□□□□ -1.54
DOA1YKL213C HYR1P40581 163 aaKnown RBP5.42□□□□□ -1.54
DOA1YKL213C PRY3P47033 881 aa5.42□□□□□ -1.54
DOA1YKL213C CLA4P48562 842 aa5.42□□□□□ -1.54
DOA1YKL213C VTC3Q02725 835 aa5.42□□□□□ -1.54
DOA1YKL213C SPH1Q06160 661 aa5.42□□□□□ -1.54
DOA1YKL213C SMD2Q06217 110 aaKnown RBP5.42□□□□□ -1.54
DOA1YKL213C RSC2Q06488 889 aa5.42□□□□□ -1.54
DOA1YKL213C CSC1Q06538 782 aa5.42□□□□□ -1.54
DOA1YKL213C SUT2Q12286 268 aa5.42□□□□□ -1.54
DOA1YKL213C CLN1P20437 546 aa5.41□□□□□ -1.54
DOA1YKL213C UTR4P32626 227 aa5.41□□□□□ -1.54
DOA1YKL213C STE5P32917 917 aa5.41□□□□□ -1.54
DOA1YKL213C PAN5P38787 379 aa5.41□□□□□ -1.54
DOA1YKL213C RET3P53600 189 aa5.41□□□□□ -1.54
DOA1YKL213C YNL247WP53852 767 aaKnown RBP5.41□□□□□ -1.54
DOA1YKL213C PEX19Q07418 342 aa5.41□□□□□ -1.54
DOA1YKL213C TIP41Q12199 356 aa5.41□□□□□ -1.54
DOA1YKL213C PHR1P05066 565 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
DOA1YKL213C SRP40P32583 406 aaPredicted RBP5.41□□□□□ -1.54
DOA1YKL213C SHP1P34223 423 aa5.41□□□□□ -1.54
DOA1YKL213C BFA1P47113 574 aa5.41□□□□□ -1.54
DOA1YKL213C YJR107WP47145 328 aa5.41□□□□□ -1.54
DOA1YKL213C LIF1P53150 421 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms