RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W HAP5Q02516 242 aa2.73□□□□□ -1.97
NUP100YKL068W FMP30Q02883 468 aa2.73□□□□□ -1.97
NUP100YKL068W DAL4Q04895 635 aa2.73□□□□□ -1.97
NUP100YKL068W LDB19Q12502 818 aa2.73□□□□□ -1.97
NUP100YKL068W SST2P11972 698 aaKnown RBP2.72□□□□□ -1.97
NUP100YKL068W NDE1P40215 560 aa2.72□□□□□ -1.97
NUP100YKL068W RRT14P40470 206 aa2.72□□□□□ -1.97
NUP100YKL068W MRPS18P42847 217 aa2.72□□□□□ -1.97
NUP100YKL068W HXT10P43581 546 aa2.72□□□□□ -1.97
NUP100YKL068W CWH41P53008 833 aa2.72□□□□□ -1.97
NUP100YKL068W PEX14P53112 341 aa2.72□□□□□ -1.97
NUP100YKL068W SPC105P53148 917 aa2.72□□□□□ -1.97
NUP100YKL068W COG6P53959 839 aa2.72□□□□□ -1.97
NUP100YKL068W UBX4P54730 416 aa2.72□□□□□ -1.97
NUP100YKL068W CDC55Q00362 526 aa2.72□□□□□ -1.97
NUP100YKL068W ISR1Q06098 443 aaKnown RBP2.72□□□□□ -1.97
NUP100YKL068W NOC3Q07896 663 aaPredicted RBP2.72□□□□□ -1.97
NUP100YKL068W APC11Q12157 165 aa2.72□□□□□ -1.97
NUP100YKL068W GCN1P33892 2672 aaKnown RBP2.72□□□□□ -1.97
NUP100YKL068W TEL1P38110 2787 aa2.72□□□□□ -1.97
NUP100YKL068W NPR1P22211 790 aa2.72□□□□□ -1.97
NUP100YKL068W PRE9P23638 258 aaKnown RBP2.72□□□□□ -1.97
NUP100YKL068W GFD2P25370 566 aaKnown RBP2.72□□□□□ -1.97
NUP100YKL068W UGA4P32837 571 aa2.72□□□□□ -1.97
NUP100YKL068W TFC4P33339 1025 aa2.72□□□□□ -1.97
NUP100YKL068W PEA2P40091 420 aa2.72□□□□□ -1.97
NUP100YKL068W YJR115WP47152 169 aa2.72□□□□□ -1.97
NUP100YKL068W RTA1P53047 317 aa2.72□□□□□ -1.97
NUP100YKL068W GPG1P53130 126 aa2.72□□□□□ -1.97
NUP100YKL068W HDA3Q06623 655 aa2.72□□□□□ -1.97
NUP100YKL068W YDL129WQ07555 291 aa2.72□□□□□ -1.97
NUP100YKL068W SPO75Q07798 868 aa2.72□□□□□ -1.97
NUP100YKL068W THI73Q07904 523 aa2.72□□□□□ -1.97
NUP100YKL068W FAP7Q12055 197 aaPredicted RBP2.72□□□□□ -1.97
NUP100YKL068W PSK1P31374 1356 aa2.72□□□□□ -1.97
NUP100YKL068W APA1P16550 321 aaKnown RBP2.71□□□□□ -1.97
NUP100YKL068W HSP60P19882 572 aaKnown RBP2.71□□□□□ -1.97
NUP100YKL068W ARE1P25628 610 aa2.71□□□□□ -1.97
NUP100YKL068W RPL8BP29453 256 aaKnown RBP2.71□□□□□ -1.97
NUP100YKL068W MRS6P32864 603 aaKnown RBP2.71□□□□□ -1.97
NUP100YKL068W IXR1P33417 597 aa2.71□□□□□ -1.97
NUP100YKL068W CIC1P38779 376 aaKnown RBP2.71□□□□□ -1.97
NUP100YKL068W UBA2P52488 636 aa2.71□□□□□ -1.97
NUP100YKL068W UME1Q03010 460 aa2.71□□□□□ -1.97
NUP100YKL068W CAB1Q04430 367 aa2.71□□□□□ -1.97
NUP100YKL068W YML082WQ04533 649 aaKnown RBP2.71□□□□□ -1.97
NUP100YKL068W PMT3P47190 753 aa2.71□□□□□ -1.98
NUP100YKL068W RRI2Q12348 645 aa2.71□□□□□ -1.98
NUP100YKL068W SSH4P32343 579 aa2.71□□□□□ -1.98
NUP100YKL068W EUG1P32474 517 aa2.71□□□□□ -1.98
NUP100YKL068W NGR1P32831 672 aaKnown RBP2.71□□□□□ -1.98
NUP100YKL068W PEX6P33760 1030 aa2.71□□□□□ -1.98
NUP100YKL068W ABZ1P37254 787 aaPredicted RBP2.71□□□□□ -1.98
NUP100YKL068W MUM2P38236 366 aa2.71□□□□□ -1.98
NUP100YKL068W YBR071WP38243 211 aa2.71□□□□□ -1.98
NUP100YKL068W NMD3P38861 518 aaKnown RBP2.71□□□□□ -1.98
NUP100YKL068W HSV2P50079 448 aaPredicted RBP2.71□□□□□ -1.98
NUP100YKL068W PIP2P52960 996 aa2.71□□□□□ -1.98
NUP100YKL068W UTP22P53254 1237 aaPredicted RBP2.71□□□□□ -1.98
NUP100YKL068W YMR206WQ03695 313 aa2.71□□□□□ -1.98
NUP100YKL068W EAF1Q06337 982 aa2.71□□□□□ -1.98
NUP100YKL068W ECM30Q06673 1274 aa2.71□□□□□ -1.98
NUP100YKL068W GRC3Q07845 632 aa2.71□□□□□ -1.98
NUP100YKL068W ALR1Q08269 859 aa2.71□□□□□ -1.98
NUP100YKL068W YOL087CQ99247 1116 aa2.71□□□□□ -1.98
NUP100YKL068W FIG2P25653 1609 aa2.7□□□□□ -1.98
NUP100YKL068W FAS2P19097 1887 aaKnown RBP2.7□□□□□ -1.98
NUP100YKL068W GCR1P07261 785 aa2.7□□□□□ -1.98
NUP100YKL068W PLC1P32383 869 aa2.7□□□□□ -1.98
NUP100YKL068W JNM1P36224 373 aa2.7□□□□□ -1.98
NUP100YKL068W GGA2P38817 585 aaKnown RBP2.7□□□□□ -1.98
NUP100YKL068W FAF1P40546 346 aaPredicted RBP2.7□□□□□ -1.98
NUP100YKL068W YFL034WP43564 1073 aa2.7□□□□□ -1.98
NUP100YKL068W RSC1P53236 928 aa2.7□□□□□ -1.98
NUP100YKL068W MET14Q02196 202 aa2.7□□□□□ -1.98
NUP100YKL068W BSC2Q05611 235 aa2.7□□□□□ -1.98
NUP100YKL068W FMP25Q08023 583 aa2.7□□□□□ -1.98
NUP100YKL068W INP54Q08227 384 aaKnown RBP2.7□□□□□ -1.98
NUP100YKL068W DAP1Q12091 152 aa2.7□□□□□ -1.98
NUP100YKL068W NCR1Q12200 1170 aa2.7□□□□□ -1.98
NUP100YKL068W RPS6AP0CX37 236 aaKnown RBP2.7□□□□□ -1.98
NUP100YKL068W RPS6BP0CX38 236 aaPredicted RBP2.7□□□□□ -1.98
NUP100YKL068W HOM3P10869 527 aa2.7□□□□□ -1.98
NUP100YKL068W APL2P36000 726 aaPredicted RBP2.7□□□□□ -1.98
NUP100YKL068W BET3P36149 193 aa2.7□□□□□ -1.98
NUP100YKL068W BNA1P47096 177 aa2.7□□□□□ -1.98
NUP100YKL068W YNL193WP53870 558 aa2.7□□□□□ -1.98
NUP100YKL068W EEB1Q02891 456 aa2.7□□□□□ -1.98
NUP100YKL068W MCD1Q12158 566 aa2.7□□□□□ -1.98
NUP100YKL068W VPS5Q92331 675 aa2.7□□□□□ -1.98
NUP100YKL068W GAL1P04385 528 aa2.69□□□□□ -1.98
NUP100YKL068W PRT1P06103 763 aaKnown RBP2.69□□□□□ -1.98
NUP100YKL068W MCM5P29496 775 aaKnown RBP2.69□□□□□ -1.98
NUP100YKL068W GCD11P32481 527 aaKnown RBP2.69□□□□□ -1.98
NUP100YKL068W PAH1P32567 862 aa2.69□□□□□ -1.98
NUP100YKL068W ABD1P32783 436 aaPredicted RBP2.69□□□□□ -1.98
NUP100YKL068W HSE1P38753 452 aa2.69□□□□□ -1.98
NUP100YKL068W MTR4P47047 1073 aaKnown RBP2.69□□□□□ -1.98
NUP100YKL068W SDA1P53313 767 aaKnown RBP2.69□□□□□ -1.98
NUP100YKL068W MEF1P25039 761 aa2.69□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms