RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W SEA4P38164 1038 aa6.47□□□□□ -1.37
PTM1YKL039W YHL012WP38709 493 aa6.47□□□□□ -1.37
PTM1YKL039W CTH1P47976 325 aa6.47□□□□□ -1.37
PTM1YKL039W HNT2P49775 206 aa6.47□□□□□ -1.37
PTM1YKL039W TYW3P53177 273 aa6.47□□□□□ -1.37
PTM1YKL039W PUB1P32588 453 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
PTM1YKL039W VAC8P39968 578 aa6.46□□□□□ -1.38
PTM1YKL039W CWC24P53769 259 aa6.46□□□□□ -1.38
PTM1YKL039W MOT2P34909 587 aaKnown RBP6.45□□□□□ -1.38
PTM1YKL039W MCM7P38132 845 aa6.45□□□□□ -1.38
PTM1YKL039W BRE4Q07660 1125 aa6.45□□□□□ -1.38
PTM1YKL039W YER152CP10356 443 aa6.44□□□□□ -1.38
PTM1YKL039W PUF4P25339 888 aaKnown RBP RIP-Chip data6.44□□□□□ -1.38 RIP-Chip
PTM1YKL039W RPN3P40016 523 aaKnown RBP6.44□□□□□ -1.38
PTM1YKL039W YPL066WQ12194 479 aa6.44□□□□□ -1.38
PTM1YKL039W INO1P11986 533 aa6.44□□□□□ -1.38
PTM1YKL039W PRO1P32264 428 aa6.44□□□□□ -1.38
PTM1YKL039W ESC2Q06340 456 aa6.44□□□□□ -1.38
PTM1YKL039W RCL1Q08096 367 aaPredicted RBP6.44□□□□□ -1.38
PTM1YKL039W SNF5P18480 905 aa6.43□□□□□ -1.38
PTM1YKL039W SRO9P25567 434 aaKnown RBP6.43□□□□□ -1.38
PTM1YKL039W LIP5P32875 414 aa6.43□□□□□ -1.38
PTM1YKL039W MDL2P33311 773 aa6.43□□□□□ -1.38
PTM1YKL039W MAC1P35192 417 aa6.43□□□□□ -1.38
PTM1YKL039W PTC7P38797 343 aa6.43□□□□□ -1.38
PTM1YKL039W TNA1P53322 534 aa6.43□□□□□ -1.38
PTM1YKL039W SSY1Q03770 852 aa6.43□□□□□ -1.38
PTM1YKL039W SPO20Q04359 397 aa6.43□□□□□ -1.38
PTM1YKL039W GNT1Q12096 491 aa6.43□□□□□ -1.38
PTM1YKL039W FAL1Q12099 399 aaKnown RBP6.43□□□□□ -1.38
PTM1YKL039W COQ4O13525 335 aa6.42□□□□□ -1.38
PTM1YKL039W BAP2P38084 609 aa6.42□□□□□ -1.38
PTM1YKL039W YFL054CP43549 646 aa6.42□□□□□ -1.38
PTM1YKL039W HOS3Q02959 697 aaKnown RBP6.42□□□□□ -1.38
PTM1YKL039W YLR225CQ05948 407 aaKnown RBP6.42□□□□□ -1.38
PTM1YKL039W OPI10Q08202 246 aa6.42□□□□□ -1.38
PTM1YKL039W RKM4Q12504 494 aa6.42□□□□□ -1.38
PTM1YKL039W BAS1P22035 811 aa6.41□□□□□ -1.38
PTM1YKL039W ADP1P25371 1049 aa6.41□□□□□ -1.38
PTM1YKL039W YKL069WP36088 180 aa6.41□□□□□ -1.38
PTM1YKL039W GTS1P40956 396 aa6.41□□□□□ -1.38
PTM1YKL039W LPX1Q12405 387 aaKnown RBP6.41□□□□□ -1.38
PTM1YKL039W PRI2P20457 528 aa6.4□□□□□ -1.38
PTM1YKL039W ABD1P32783 436 aaPredicted RBP6.4□□□□□ -1.38
PTM1YKL039W YKL107WP34251 309 aa6.4□□□□□ -1.39
PTM1YKL039W RSC58Q07979 502 aa6.4□□□□□ -1.39
PTM1YKL039W AGP1P25376 633 aa6.39□□□□□ -1.39
PTM1YKL039W CCZ1P38273 704 aa6.39□□□□□ -1.39
PTM1YKL039W YGL176CP46945 554 aa6.39□□□□□ -1.39
PTM1YKL039W SSF2Q12153 453 aaPredicted RBP6.39□□□□□ -1.39
PTM1YKL039W HSP78P33416 811 aa6.38□□□□□ -1.39
PTM1YKL039W PIK1P39104 1066 aa6.38□□□□□ -1.39
PTM1YKL039W ORC3P54790 616 aa6.38□□□□□ -1.39
PTM1YKL039W RPL11AP0C0W9 174 aaKnown RBP6.37□□□□□ -1.39
PTM1YKL039W SBA1P28707 216 aaKnown RBP6.37□□□□□ -1.39
PTM1YKL039W PNT1P38969 423 aa6.37□□□□□ -1.39
PTM1YKL039W SIP5P40210 489 aaKnown RBP6.37□□□□□ -1.39
PTM1YKL039W RPL11BQ3E757 174 aaPredicted RBP6.37□□□□□ -1.39
PTM1YKL039W DBP2P24783 546 aaKnown RBP6.36□□□□□ -1.39
PTM1YKL039W AIM26P32858 118 aa6.36□□□□□ -1.39
PTM1YKL039W MXR1P40029 184 aa6.36□□□□□ -1.39
PTM1YKL039W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
PTM1YKL039W NBA1Q08229 501 aaKnown RBP6.36□□□□□ -1.39
PTM1YKL039W SPP382Q06411 708 aaPredicted RBP6.35□□□□□ -1.39
PTM1YKL039W SPF1P39986 1215 aaKnown RBP6.35□□□□□ -1.39
PTM1YKL039W KRI1P42846 591 aaKnown RBP6.35□□□□□ -1.39
PTM1YKL039W SLA2P33338 968 aa6.34□□□□□ -1.39
PTM1YKL039W PIN4P34217 668 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
PTM1YKL039W VBA5P36172 582 aa6.34□□□□□ -1.39
PTM1YKL039W SHE9Q04172 456 aa6.34□□□□□ -1.39
PTM1YKL039W TDA5Q06417 326 aaKnown RBP6.34□□□□□ -1.39
PTM1YKL039W LRG1P35688 1017 aa6.33□□□□□ -1.4
PTM1YKL039W POL12P38121 705 aaPredicted RBP6.33□□□□□ -1.4
PTM1YKL039W NRD1P53617 575 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
PTM1YKL039W ACM1Q08981 209 aa6.33□□□□□ -1.4
PTM1YKL039W MBP1P39678 833 aa6.32□□□□□ -1.4
PTM1YKL039W RSB1Q08417 382 aa6.32□□□□□ -1.4
PTM1YKL039W WRS1Q12109 432 aaKnown RBP6.32□□□□□ -1.4
PTM1YKL039W DFG16Q99234 619 aa6.32□□□□□ -1.4
PTM1YKL039W SPS1P08458 490 aa6.31□□□□□ -1.4
PTM1YKL039W UGA2P38067 497 aa6.31□□□□□ -1.4
PTM1YKL039W TAT2P38967 592 aa6.31□□□□□ -1.4
PTM1YKL039W SNF7P39929 240 aaKnown RBP6.31□□□□□ -1.4
PTM1YKL039W ABZ1P37254 787 aaPredicted RBP6.31□□□□□ -1.4
PTM1YKL039W YDL177CQ12257 170 aa6.31□□□□□ -1.4
PTM1YKL039W SPA2P23201 1466 aaKnown RBP6.3□□□□□ -1.4
PTM1YKL039W HSL1P34244 1518 aa6.3□□□□□ -1.4
PTM1YKL039W STE5P32917 917 aa6.3□□□□□ -1.4
PTM1YKL039W MRP8P35719 219 aa6.3□□□□□ -1.4
PTM1YKL039W GEM1P39722 662 aa6.3□□□□□ -1.4
PTM1YKL039W SPT6P23615 1451 aaKnown RBP6.29□□□□□ -1.4
PTM1YKL039W BI4P03879 638 aa6.29□□□□□ -1.4
PTM1YKL039W GRX1P25373 110 aaKnown RBP6.29□□□□□ -1.4
PTM1YKL039W SEC26P41810 973 aaKnown RBP6.29□□□□□ -1.4
PTM1YKL039W GLT1Q12680 2145 aaKnown RBP6.29□□□□□ -1.4
PTM1YKL039W ECL1P48235 211 aa6.28□□□□□ -1.4
PTM1YKL039W FOL2P51601 243 aaKnown RBP6.28□□□□□ -1.4
PTM1YKL039W ATG13Q06628 738 aa6.28□□□□□ -1.4
PTM1YKL039W SGS1P35187 1447 aa6.28□□□□□ -1.4
PTM1YKL039W ETP1P38748 585 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms