RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeast

Gene RPB3, Length 957 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB3	YIL021W	TRS120	Q04183	1289 aa		4.64	□□□□□ -1.67
RPB3	YIL021W	CMR1	Q12510	522 aa	Known RBP	4.64	□□□□□ -1.67
RPB3	YIL021W	CHS2	P14180	963 aa		4.63	□□□□□ -1.67
RPB3	YIL021W	CLC1	P17891	233 aa		4.63	□□□□□ -1.67
RPB3	YIL021W	AKL1	P38080	1108 aa	Known RBP	4.63	□□□□□ -1.67
RPB3	YIL021W	ERP5	P38819	212 aa		4.63	□□□□□ -1.67
RPB3	YIL021W	YNL011C	P53980	444 aa		4.63	□□□□□ -1.67
RPB3	YIL021W	SEN54	Q02825	467 aa	Predicted RBP	4.63	□□□□□ -1.67
RPB3	YIL021W	MSH6	Q03834	1242 aa		4.63	□□□□□ -1.67
RPB3	YIL021W	TY4B-H	P0C2J7	1802 aa		4.62	□□□□□ -1.67
RPB3	YIL021W	TY4B-J	P47024	1803 aa		4.62	□□□□□ -1.67
RPB3	YIL021W	YRF1-2	P40105	1681 aa		4.62	□□□□□ -1.67
RPB3	YIL021W	NPR1	P22211	790 aa		4.62	□□□□□ -1.67
RPB3	YIL021W	GPI13	Q07830	1017 aa		4.62	□□□□□ -1.67
RPB3	YIL021W	YBL113C	Q7M4S9	792 aa		4.62	□□□□□ -1.67
RPB3	YIL021W	FLP1	P03870	423 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
RPB3	YIL021W	TOS1	P38288	455 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	MAM1	P40065	302 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	SPO74	P45819	413 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	TCB2	P48231	1178 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	GYP7	P48365	746 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	DSD1	P53095	428 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	YNL050C	P53952	270 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	ECM16	Q04217	1267 aa	Known RBP	4.61	□□□□□ -1.67
RPB3	YIL021W	FRT1	Q99332	602 aa		4.61	□□□□□ -1.67
RPB3	YIL021W	RRP5	Q05022	1729 aa	Known RBP	4.6	□□□□□ -1.67
RPB3	YIL021W	HTS1	P07263	546 aa	Known RBP	4.6	□□□□□ -1.67
RPB3	YIL021W	PCT1	P13259	424 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	HEM3	P28789	327 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	GRS1	P38088	690 aa	Known RBP	4.6	□□□□□ -1.67
RPB3	YIL021W	STM1	P39015	273 aa	Known RBP	4.6	□□□□□ -1.67
RPB3	YIL021W	SNF7	P39929	240 aa	Known RBP	4.6	□□□□□ -1.67
RPB3	YIL021W	RRT14	P40470	206 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	ZDS1	P50111	915 aa	Known RBP	4.6	□□□□□ -1.67
RPB3	YIL021W	FAR11	P53917	953 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	CDC55	Q00362	526 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	YIL177C	P40434	1758 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	YJL225C	P40889	1758 aa		4.6	□□□□□ -1.67
RPB3	YIL021W	CYC7	P00045	113 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	MSB1	P21339	1137 aa	Known RBP	4.59	□□□□□ -1.67
RPB3	YIL021W	EDE1	P34216	1381 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	SEA4	P38164	1038 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	SRT1	Q03175	343 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	BSC2	Q05611	235 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	NUT2	Q06213	157 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	MAG2	Q06436	670 aa	Known RBP	4.59	□□□□□ -1.67
RPB3	YIL021W	GIC2	Q06648	383 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	BRE4	Q07660	1125 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	YIG1	Q08956	461 aa		4.59	□□□□□ -1.67
RPB3	YIL021W	FKS3	Q04952	1785 aa		4.58	□□□□□ -1.68
RPB3	YIL021W	YOR223W	Q12015	292 aa		4.58	□□□□□ -1.68
RPB3	YIL021W	URB1	P34241	1764 aa	Known RBP	4.58	□□□□□ -1.68
RPB3	YIL021W	HSP104	P31539	908 aa	Known RBP	4.57	□□□□□ -1.68
RPB3	YIL021W	MNN4	P36044	1178 aa		4.57	□□□□□ -1.68
RPB3	YIL021W	VPS24	P36095	224 aa	Known RBP	4.57	□□□□□ -1.68
RPB3	YIL021W	GPT2	P36148	743 aa		4.57	□□□□□ -1.68
RPB3	YIL021W	YNG2	P38806	282 aa	Known RBP	4.57	□□□□□ -1.68
RPB3	YIL021W	RPS0B	P46654	252 aa	Known RBP	4.57	□□□□□ -1.68
RPB3	YIL021W	GCV1	P48015	400 aa		4.57	□□□□□ -1.68
RPB3	YIL021W	NUT1	P53114	1132 aa		4.57	□□□□□ -1.68
RPB3	YIL021W	SNU71	P53207	620 aa	Known RBP	4.57	□□□□□ -1.68
RPB3	YIL021W	AOS1	Q06624	347 aa		4.57	□□□□□ -1.68
RPB3	YIL021W	ROX1	P25042	368 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	SEC20	P28791	383 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	LIP5	P32875	414 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	YHL008C	P38750	627 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	CTF4	Q01454	927 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	MEC3	Q02574	474 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	CSI1	Q04368	295 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	YMR074C	Q04773	145 aa		4.56	□□□□□ -1.68
RPB3	YIL021W	BMS1	Q08965	1183 aa	Known RBP	4.56	□□□□□ -1.68
RPB3	YIL021W	RAD50	P12753	1312 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	COQ4	O13525	335 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	RPS19A	P07280	144 aa	Known RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	RPS19B	P07281	144 aa	Predicted RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	GCD1	P09032	578 aa	Predicted RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	ECM2	P38241	364 aa	Known RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	YHL050C	P38721	697 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	YHR219W	P38900	624 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	DJP1	P40564	432 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	UTP22	P53254	1237 aa	Predicted RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	SPO1	P53541	631 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	YAF9	P53930	226 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	DOT1	Q04089	582 aa	Known RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	NSE3	Q05541	303 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	NKP2	Q06162	153 aa		4.55	□□□□□ -1.68
RPB3	YIL021W	INP54	Q08227	384 aa	Known RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	MSC6	Q08818	692 aa	Known RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	LSP1	Q12230	341 aa	Known RBP	4.55	□□□□□ -1.68
RPB3	YIL021W	LYS2	P07702	1392 aa		4.54	□□□□□ -1.68
RPB3	YIL021W	KCC4	P25389	1037 aa		4.54	□□□□□ -1.68
RPB3	YIL021W	WHI3	P34761	661 aa	Known RBP	4.54	□□□□□ -1.68
RPB3	YIL021W	RFC1	P38630	861 aa	Known RBP	4.54	□□□□□ -1.68
RPB3	YIL021W	NMD2	P38798	1089 aa	Known RBP	4.54	□□□□□ -1.68
RPB3	YIL021W	THI12	P42883	340 aa		4.54	□□□□□ -1.68
RPB3	YIL021W	THI5	P43534	340 aa		4.54	□□□□□ -1.68
RPB3	YIL021W	THI11	P47183	340 aa		4.54	□□□□□ -1.68
RPB3	YIL021W	SDH1	Q00711	640 aa		4.54	□□□□□ -1.68
RPB3	YIL021W	PMT7	Q06644	662 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms