RNA–Protein interactions for RNA: YHR206W

SKN7, Transcript of Nuclear response regulator and transcription factor, yeast

Gene SKN7, Length 1,869 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKN7	YHR206W	OYE3	P41816	400 aa	Predicted RBP	4.1	□□□□□ -1.75
SKN7	YHR206W	IES1	P43579	692 aa		4.1	□□□□□ -1.75
SKN7	YHR206W	ESF2	P53743	316 aa	Known RBP	4.1	□□□□□ -1.75
SKN7	YHR206W	MEH1	Q02205	184 aa		4.1	□□□□□ -1.75
SKN7	YHR206W	AVO1	Q08236	1176 aa		4.1	□□□□□ -1.75
SKN7	YHR206W	SEC23	P15303	768 aa	Known RBP	4.09	□□□□□ -1.75
SKN7	YHR206W	PRE9	P23638	258 aa	Known RBP	4.09	□□□□□ -1.75
SKN7	YHR206W	LIP5	P32875	414 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	SMY2	P32909	740 aa	Known RBP	4.09	□□□□□ -1.75
SKN7	YHR206W	BLI1	P35727	113 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	FUI1	P38196	639 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	YAR028W	P39548	234 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	CIT3	P43635	486 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	MTR4	P47047	1073 aa	Known RBP	4.09	□□□□□ -1.75
SKN7	YHR206W	YNR063W	P53749	607 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	YGR161W-C	Q3E744	92 aa		4.09	□□□□□ -1.75
SKN7	YHR206W	SEC8	P32855	1065 aa		4.09	□□□□□ -1.76
SKN7	YHR206W	YJR142W	P47173	342 aa		4.09	□□□□□ -1.76
SKN7	YHR206W	PSK2	Q08217	1101 aa		4.09	□□□□□ -1.76
SKN7	YHR206W	ERP4	Q12450	207 aa		4.09	□□□□□ -1.76
SKN7	YHR206W	THS1	P04801	734 aa	Known RBP	4.08	□□□□□ -1.76
SKN7	YHR206W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	RIP-Chip
SKN7	YHR206W	MGE1	P38523	228 aa		4.08	□□□□□ -1.76
SKN7	YHR206W	HOS4	P40480	1083 aa		4.08	□□□□□ -1.76
SKN7	YHR206W	YGL081W	P53156	320 aa		4.08	□□□□□ -1.76
SKN7	YHR206W	RCM1	P53972	490 aa		4.08	□□□□□ -1.76
SKN7	YHR206W	HDA2	Q06629	674 aa		4.08	□□□□□ -1.76
SKN7	YHR206W	YVC1	Q12324	675 aa		4.08	□□□□□ -1.76
SKN7	YHR206W	PWP2	P25635	923 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	RPN12	P32496	274 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	AFG2	P32794	780 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	NFU1	P32860	256 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	NNK1	P36003	928 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	VPS24	P36095	224 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	SVL3	Q03088	825 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	YLR257W	Q06146	321 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	DED1	P06634	604 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	OPI1	P21957	404 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	RET1	P22276	1149 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	TRX2	P22803	104 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	MNN1	P39106	762 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	MRPS18	P42847	217 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	GNP1	P48813	663 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	RPN4	Q03465	531 aa		4.07	□□□□□ -1.76
SKN7	YHR206W	RSA3	Q05942	220 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	PUS7	Q08647	676 aa	Known RBP	4.07	□□□□□ -1.76
SKN7	YHR206W	ADD66	P36040	267 aa		4.06	□□□□□ -1.76
SKN7	YHR206W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SKN7	YHR206W	ENP1	P38333	483 aa	Known RBP	4.06	□□□□□ -1.76
SKN7	YHR206W	PEX7	P39108	375 aa		4.06	□□□□□ -1.76
SKN7	YHR206W	ALD6	P54115	500 aa	Known RBP	4.06	□□□□□ -1.76
SKN7	YHR206W	TLG1	Q03322	224 aa		4.06	□□□□□ -1.76
SKN7	YHR206W	TPP1	Q03796	238 aa		4.06	□□□□□ -1.76
SKN7	YHR206W	MCD1	Q12158	566 aa		4.06	□□□□□ -1.76
SKN7	YHR206W	SNU66	Q12420	587 aa	Predicted RBP	4.06	□□□□□ -1.76
SKN7	YHR206W	GLT1	Q12680	2145 aa	Known RBP	4.06	□□□□□ -1.76
SKN7	YHR206W	MAL31	P38156	614 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	HXT13	P39924	564 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	YEN1	P40028	759 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	HXT17	P53631	564 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	HXT15	P54854	567 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	EST2	Q06163	884 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	GCR1	P07261	785 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	LRG1	P35688	1017 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	UBP12	P39538	1254 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	BUD6	P41697	788 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	YJL045W	P47052	634 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	RAT1	Q02792	1006 aa	Known RBP	4.05	□□□□□ -1.76
SKN7	YHR206W	ROD1	Q02805	837 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	YOR059C	Q08448	450 aa	Known RBP	4.05	□□□□□ -1.76
SKN7	YHR206W	TRE1	Q08919	783 aa		4.05	□□□□□ -1.76
SKN7	YHR206W	DPB3	P27344	201 aa		4.04	□□□□□ -1.76
SKN7	YHR206W	QNS1	P38795	714 aa	Known RBP	4.04	□□□□□ -1.76
SKN7	YHR206W	SSY1	Q03770	852 aa		4.04	□□□□□ -1.76
SKN7	YHR206W	CDC53	Q12018	815 aa	Known RBP	4.04	□□□□□ -1.76
SKN7	YHR206W	SAM35	P14693	329 aa		4.03	□□□□□ -1.76
SKN7	YHR206W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
SKN7	YHR206W	DEF1	P35732	738 aa	Known RBP	4.03	□□□□□ -1.76
SKN7	YHR206W	CAB3	P36076	571 aa		4.03	□□□□□ -1.76
SKN7	YHR206W	YJL049W	P47048	450 aa		4.03	□□□□□ -1.76
SKN7	YHR206W	RKM2	Q03942	479 aa		4.03	□□□□□ -1.76
SKN7	YHR206W	LAP2	Q10740	671 aa		4.03	□□□□□ -1.76
SKN7	YHR206W	HSP78	P33416	811 aa		4.03	□□□□□ -1.77
SKN7	YHR206W	LPX1	Q12405	387 aa	Known RBP	4.03	□□□□□ -1.77
SKN7	YHR206W	MET6	P05694	767 aa	Known RBP	4.02	□□□□□ -1.77
SKN7	YHR206W	PRO1	P32264	428 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	MKK2	P32491	506 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	ALG3	P38179	458 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	PTC7	P38797	343 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	GPB2	P39717	880 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	SIW14	P53965	281 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	MDM1	Q01846	1127 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	VMS1	Q04311	632 aa	Known RBP	4.02	□□□□□ -1.77
SKN7	YHR206W	MRL1	Q06815	381 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	RCL1	Q08096	367 aa	Predicted RBP	4.02	□□□□□ -1.77
SKN7	YHR206W	YOR131C	Q12486	218 aa		4.02	□□□□□ -1.77
SKN7	YHR206W	PEP7	P32609	515 aa		4.01	□□□□□ -1.77
SKN7	YHR206W	MAD1	P40957	749 aa		4.01	□□□□□ -1.77
SKN7	YHR206W	AVT1	P47082	602 aa		4.01	□□□□□ -1.77
SKN7	YHR206W	UTP14	Q04500	899 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms