RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeastyeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD3YHR170W CEM1P39525 442 aa5.46□□□□□ -1.54
NMD3YHR170W YER156CP40093 338 aaKnown RBP5.46□□□□□ -1.54
NMD3YHR170W DAK2P43550 591 aa5.46□□□□□ -1.54
NMD3YHR170W YJR008WP47085 338 aa5.46□□□□□ -1.54
NMD3YHR170W TOS4Q06266 489 aa5.46□□□□□ -1.54
NMD3YHR170W NYV1Q12255 253 aa5.46□□□□□ -1.54
NMD3YHR170W NMD2P38798 1089 aaKnown RBP5.45□□□□□ -1.54
NMD3YHR170W YFR016CP43597 1233 aaKnown RBP5.45□□□□□ -1.54
NMD3YHR170W CTH1P47976 325 aa5.45□□□□□ -1.54
NMD3YHR170W YAF9P53930 226 aa5.45□□□□□ -1.54
NMD3YHR170W HEH2Q03281 663 aa5.45□□□□□ -1.54
NMD3YHR170W PKH1Q03407 766 aa5.45□□□□□ -1.54
NMD3YHR170W BSC2Q05611 235 aa5.45□□□□□ -1.54
NMD3YHR170W PMD1P32634 1753 aa5.44□□□□□ -1.54
NMD3YHR170W UBP12P39538 1254 aa5.44□□□□□ -1.54
NMD3YHR170W PRK1P40494 810 aa5.44□□□□□ -1.54
NMD3YHR170W NNF1P47149 201 aa5.44□□□□□ -1.54
NMD3YHR170W LYS5P50113 272 aa5.44□□□□□ -1.54
NMD3YHR170W MDG1P53885 366 aa5.44□□□□□ -1.54
NMD3YHR170W CTI6Q08923 506 aa5.44□□□□□ -1.54
NMD3YHR170W PYC2P32327 1180 aaKnown RBP5.43□□□□□ -1.54
NMD3YHR170W GCD7P32502 381 aaPredicted RBP5.43□□□□□ -1.54
NMD3YHR170W HPF1Q05164 967 aa5.43□□□□□ -1.54
NMD3YHR170W NKP2Q06162 153 aa5.43□□□□□ -1.54
NMD3YHR170W FPR4Q06205 392 aaPredicted RBP5.43□□□□□ -1.54
NMD3YHR170W BUG1Q12191 341 aa5.43□□□□□ -1.54
NMD3YHR170W RPP1AP05318 106 aaPredicted RBP5.42□□□□□ -1.54
NMD3YHR170W RFC1P38630 861 aaKnown RBP5.42□□□□□ -1.54
NMD3YHR170W SAM37P50110 327 aa5.42□□□□□ -1.54
NMD3YHR170W PPT1P53043 513 aa5.42□□□□□ -1.54
NMD3YHR170W RIX7Q07844 837 aaKnown RBP5.42□□□□□ -1.54
NMD3YHR170W NOC3Q07896 663 aaPredicted RBP5.42□□□□□ -1.54
NMD3YHR170W DUR1,2P32528 1835 aaKnown RBP5.42□□□□□ -1.54
NMD3YHR170W FLP1P03870 423 aa5.42□□□□□ -1.54
NMD3YHR170W GBP2P25555 427 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
NMD3YHR170W SEC8P32855 1065 aa5.42□□□□□ -1.54
NMD3YHR170W YJR107WP47145 328 aa5.42□□□□□ -1.54
NMD3YHR170W RPT1P33299 467 aaKnown RBP5.41□□□□□ -1.54
NMD3YHR170W VPS35P34110 944 aa5.41□□□□□ -1.54
NMD3YHR170W YHL008CP38750 627 aa5.41□□□□□ -1.54
NMD3YHR170W SUB1P54000 292 aaKnown RBP5.41□□□□□ -1.54
NMD3YHR170W RMD1Q03441 430 aa5.41□□□□□ -1.54
NMD3YHR170W JJJ3P47138 172 aa5.4□□□□□ -1.55
NMD3YHR170W ALD3P54114 506 aa5.4□□□□□ -1.55
NMD3YHR170W GPM1P00950 247 aaKnown RBP5.39□□□□□ -1.55
NMD3YHR170W CAF20P12962 161 aaKnown RBP5.39□□□□□ -1.55
NMD3YHR170W MCM2P29469 868 aa5.39□□□□□ -1.55
NMD3YHR170W GCD6P32501 712 aaKnown RBP5.39□□□□□ -1.55
NMD3YHR170W TFA2P36145 328 aa5.39□□□□□ -1.55
NMD3YHR170W KTR3P38130 404 aaPredicted RBP5.39□□□□□ -1.55
NMD3YHR170W TOS1P38288 455 aa5.39□□□□□ -1.55
NMD3YHR170W FYV10P40492 516 aa5.39□□□□□ -1.55
NMD3YHR170W RNH70P53331 553 aa5.39□□□□□ -1.55
NMD3YHR170W UBP16Q02863 499 aa5.39□□□□□ -1.55
NMD3YHR170W SWE1P32944 819 aa5.38□□□□□ -1.55
NMD3YHR170W MGE1P38523 228 aa5.38□□□□□ -1.55
NMD3YHR170W INP51P40559 946 aaKnown RBP5.38□□□□□ -1.55
NMD3YHR170W UTP22P53254 1237 aaPredicted RBP5.38□□□□□ -1.55
NMD3YHR170W OYE2Q03558 400 aaKnown RBP5.38□□□□□ -1.55
NMD3YHR170W RAD50P12753 1312 aa5.38□□□□□ -1.55
NMD3YHR170W SSK22P25390 1331 aaPredicted RBP5.38□□□□□ -1.55
NMD3YHR170W CDC16P09798 840 aa5.38□□□□□ -1.55
NMD3YHR170W PDC5P16467 563 aaKnown RBP5.38□□□□□ -1.55
NMD3YHR170W UGA4P32837 571 aa5.38□□□□□ -1.55
NMD3YHR170W CIC1P38779 376 aaKnown RBP5.38□□□□□ -1.55
NMD3YHR170W NUT1P53114 1132 aa5.38□□□□□ -1.55
NMD3YHR170W BIO5P53744 561 aaKnown RBP5.38□□□□□ -1.55
NMD3YHR170W VPS72Q03388 795 aa5.38□□□□□ -1.55
NMD3YHR170W MSH6Q03834 1242 aa5.38□□□□□ -1.55
NMD3YHR170W YCS4Q06156 1176 aa5.38□□□□□ -1.55
NMD3YHR170W RSC2Q06488 889 aa5.38□□□□□ -1.55
NMD3YHR170W GLO4Q12320 285 aa5.38□□□□□ -1.55
NMD3YHR170W NOT3P06102 836 aaKnown RBP5.37□□□□□ -1.55
NMD3YHR170W HVG1P0CE11 249 aa5.37□□□□□ -1.55
NMD3YHR170W FUS1P11710 512 aa5.37□□□□□ -1.55
NMD3YHR170W PPG1P32838 368 aa5.37□□□□□ -1.55
NMD3YHR170W ECM21P38167 1117 aaKnown RBP5.37□□□□□ -1.55
NMD3YHR170W AMN1P38285 549 aaPredicted RBP5.37□□□□□ -1.55
NMD3YHR170W RIM11P38615 370 aa5.37□□□□□ -1.55
NMD3YHR170W MON1P53129 644 aa5.37□□□□□ -1.55
NMD3YHR170W YGR035CP53222 116 aa5.37□□□□□ -1.55
NMD3YHR170W PDR18P53756 1333 aa5.37□□□□□ -1.55
NMD3YHR170W ALO1P54783 526 aaKnown RBP5.37□□□□□ -1.55
NMD3YHR170W RAT1Q02792 1006 aaKnown RBP5.37□□□□□ -1.55
NMD3YHR170W MTC5Q03897 1148 aa5.37□□□□□ -1.55
NMD3YHR170W ECM16Q04217 1267 aaKnown RBP5.37□□□□□ -1.55
NMD3YHR170W SPR28Q04921 423 aa5.37□□□□□ -1.55
NMD3YHR170W JIP5Q06214 492 aaPredicted RBP5.37□□□□□ -1.55
NMD3YHR170W SNU66Q12420 587 aaPredicted RBP5.37□□□□□ -1.55
NMD3YHR170W NCB2Q92317 146 aa5.37□□□□□ -1.55
NMD3YHR170W HXK1P04806 485 aaKnown RBP5.36□□□□□ -1.55
NMD3YHR170W SEC18P18759 758 aaKnown RBP5.36□□□□□ -1.55
NMD3YHR170W KNS1P32350 737 aaPredicted RBP5.36□□□□□ -1.55
NMD3YHR170W MET1P36150 593 aa5.36□□□□□ -1.55
NMD3YHR170W FAA3P39002 694 aa5.36□□□□□ -1.55
NMD3YHR170W YGL242CP53066 181 aa5.36□□□□□ -1.55
NMD3YHR170W PIB2P53191 635 aa5.36□□□□□ -1.55
NMD3YHR170W HXT17P53631 564 aa5.36□□□□□ -1.55
NMD3YHR170W YNL193WP53870 558 aa5.36□□□□□ -1.55
NMD3YHR170W RPN7Q06103 429 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 64.1 ms