RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W ETP1P38748 585 aaKnown RBP2.53□□□□□ -2
RTT107YHR154W SPF1P39986 1215 aaKnown RBP2.53□□□□□ -2
RTT107YHR154W FIR1P40020 876 aa2.53□□□□□ -2
RTT107YHR154W YER156CP40093 338 aaKnown RBP2.53□□□□□ -2
RTT107YHR154W YJR120WP47157 116 aa2.53□□□□□ -2
RTT107YHR154W YPR097WQ06839 1073 aa2.53□□□□□ -2
RTT107YHR154W YPR053CQ6Q5F3 151 aa2.53□□□□□ -2
RTT107YHR154W VMA4P22203 233 aaKnown RBP2.53□□□□□ -2
RTT107YHR154W HIR1P32479 840 aa2.53□□□□□ -2
RTT107YHR154W YBR184WP38299 523 aa2.53□□□□□ -2
RTT107YHR154W BOI2P39969 1040 aa2.53□□□□□ -2
RTT107YHR154W EAF6P47128 113 aa2.53□□□□□ -2
RTT107YHR154W MON1P53129 644 aa2.53□□□□□ -2
RTT107YHR154W CAB1Q04430 367 aa2.53□□□□□ -2
RTT107YHR154W BSC2Q05611 235 aa2.53□□□□□ -2
RTT107YHR154W EAF1Q06337 982 aa2.53□□□□□ -2
RTT107YHR154W NTG2Q08214 380 aa2.53□□□□□ -2
RTT107YHR154W INP54Q08227 384 aaKnown RBP2.53□□□□□ -2
RTT107YHR154W MRC1P25588 1096 aa2.53□□□□□ -2.01
RTT107YHR154W PWP2P25635 923 aaKnown RBP2.53□□□□□ -2.01
RTT107YHR154W MNN4P36044 1178 aa2.53□□□□□ -2.01
RTT107YHR154W VPS24P36095 224 aaKnown RBP2.53□□□□□ -2.01
RTT107YHR154W DSS1P39112 969 aa2.53□□□□□ -2.01
RTT107YHR154W CDC55Q00362 526 aa2.53□□□□□ -2.01
RTT107YHR154W GIR2Q03768 265 aaPredicted RBP2.53□□□□□ -2.01
RTT107YHR154W RAV1P47104 1357 aa2.53□□□□□ -2.01
RTT107YHR154W SWI5P08153 709 aa2.52□□□□□ -2.01
RTT107YHR154W GFD2P25370 566 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W MRS6P32864 603 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W SMC1P32908 1225 aa2.52□□□□□ -2.01
RTT107YHR154W MTC2P34246 357 aa2.52□□□□□ -2.01
RTT107YHR154W YKL222CP35995 705 aa2.52□□□□□ -2.01
RTT107YHR154W GGA2P38817 585 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W MCD1Q12158 566 aa2.52□□□□□ -2.01
RTT107YHR154W MPD2Q99316 277 aa2.52□□□□□ -2.01
RTT107YHR154W ADE6P38972 1358 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W RIM15P43565 1770 aa2.52□□□□□ -2.01
RTT107YHR154W YLR419WQ06698 1435 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W CIT1P00890 479 aa2.52□□□□□ -2.01
RTT107YHR154W KAR2P16474 682 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W SQT1P35184 431 aa2.52□□□□□ -2.01
RTT107YHR154W BLI1P35727 113 aa2.52□□□□□ -2.01
RTT107YHR154W RSM26P47141 266 aa2.52□□□□□ -2.01
RTT107YHR154W PEX8P53248 589 aa2.52□□□□□ -2.01
RTT107YHR154W UTP22P53254 1237 aaPredicted RBP2.52□□□□□ -2.01
RTT107YHR154W TOS4Q06266 489 aa2.52□□□□□ -2.01
RTT107YHR154W ATG13Q06628 738 aa2.52□□□□□ -2.01
RTT107YHR154W YDL124WQ07551 312 aaKnown RBP2.52□□□□□ -2.01
RTT107YHR154W COBP00163 385 aa2.51□□□□□ -2.01
RTT107YHR154W CDC34P14682 295 aa2.51□□□□□ -2.01
RTT107YHR154W YKL133CP36066 463 aa2.51□□□□□ -2.01
RTT107YHR154W RAD55P38953 406 aa2.51□□□□□ -2.01
RTT107YHR154W HSV2P50079 448 aaPredicted RBP2.51□□□□□ -2.01
RTT107YHR154W MSN5P52918 1224 aa2.51□□□□□ -2.01
RTT107YHR154W SDA1P53313 767 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W SQS1P53866 767 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W YPR084WQ06821 456 aa2.51□□□□□ -2.01
RTT107YHR154W NKP1Q12493 238 aa2.51□□□□□ -2.01
RTT107YHR154W RPL8AP17076 256 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W MCM5P29496 775 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W TFC3P34111 1160 aa2.51□□□□□ -2.01
RTT107YHR154W JNM1P36224 373 aa2.51□□□□□ -2.01
RTT107YHR154W TOS1P38288 455 aa2.51□□□□□ -2.01
RTT107YHR154W ALR2P43553 858 aa2.51□□□□□ -2.01
RTT107YHR154W NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.51□□□□□ -2.01not detected
RTT107YHR154W YOR378WQ08902 515 aa2.51□□□□□ -2.01
RTT107YHR154W BUG1Q12191 341 aa2.51□□□□□ -2.01
RTT107YHR154W CAN1P04817 590 aa2.51□□□□□ -2.01
RTT107YHR154W ABD1P32783 436 aaPredicted RBP2.51□□□□□ -2.01
RTT107YHR154W NGR1P32831 672 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W MOT2P34909 587 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W ERT1P38140 529 aa2.51□□□□□ -2.01
RTT107YHR154W VID27P40157 782 aa2.51□□□□□ -2.01
RTT107YHR154W KRI1P42846 591 aaKnown RBP2.51□□□□□ -2.01
RTT107YHR154W YCS4Q06156 1176 aa2.51□□□□□ -2.01
RTT107YHR154W SLM3Q12093 417 aa2.51□□□□□ -2.01
RTT107YHR154W HXK1P04806 485 aaKnown RBP2.5□□□□□ -2.01
RTT107YHR154W MFT1P33441 392 aaKnown RBP2.5□□□□□ -2.01
RTT107YHR154W LDH1P38139 375 aa2.5□□□□□ -2.01
RTT107YHR154W RRT14P40470 206 aa2.5□□□□□ -2.01
RTT107YHR154W HXT8P40886 569 aa2.5□□□□□ -2.01
RTT107YHR154W ERP6P53198 216 aa2.5□□□□□ -2.01
RTT107YHR154W PPM2Q08282 695 aa2.5□□□□□ -2.01
RTT107YHR154W RTT10Q08924 1013 aa2.5□□□□□ -2.01
RTT107YHR154W ERP4Q12450 207 aa2.5□□□□□ -2.01
RTT107YHR154W ENP1P38333 483 aaKnown RBP2.5□□□□□ -2.01
RTT107YHR154W UTP7P40055 554 aaKnown RBP2.5□□□□□ -2.01
RTT107YHR154W XKS1P42826 600 aa2.5□□□□□ -2.01
RTT107YHR154W PMT3P47190 753 aa2.5□□□□□ -2.01
RTT107YHR154W TAN1P53072 289 aaPredicted RBP2.5□□□□□ -2.01
RTT107YHR154W PEX14P53112 341 aa2.5□□□□□ -2.01
RTT107YHR154W DED1P06634 604 aaKnown RBP2.49□□□□□ -2.01
RTT107YHR154W TOM70P07213 617 aaKnown RBP2.49□□□□□ -2.01
RTT107YHR154W MSH2P25847 964 aa2.49□□□□□ -2.01
RTT107YHR154W UGA4P32837 571 aa2.49□□□□□ -2.01
RTT107YHR154W PEX6P33760 1030 aa2.49□□□□□ -2.01
RTT107YHR154W ALA1P40825 983 aaKnown RBP2.49□□□□□ -2.01
RTT107YHR154W YFL066CP43538 392 aa2.49□□□□□ -2.01
RTT107YHR154W YLR225CQ05948 407 aaKnown RBP2.49□□□□□ -2.01
RTT107YHR154W YRF1-4O13559 1382 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms