RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C MCX1P38323 520 aaPredicted RBP6.18□□□□□ -1.42
SFB3YHR098C SSB2P40150 613 aaKnown RBP6.18□□□□□ -1.42
SFB3YHR098C EFM4P40516 257 aa6.18□□□□□ -1.42
SFB3YHR098C PIB2P53191 635 aa6.18□□□□□ -1.42
SFB3YHR098C AFT2Q08957 416 aa6.18□□□□□ -1.42
SFB3YHR098C ARG4P04076 463 aaPredicted RBP6.17□□□□□ -1.42
SFB3YHR098C RAD4P14736 754 aa6.17□□□□□ -1.42
SFB3YHR098C CNS1P33313 385 aa6.17□□□□□ -1.42
SFB3YHR098C BUD2P33314 1104 aa6.17□□□□□ -1.42
SFB3YHR098C REV7P38927 245 aa6.17□□□□□ -1.42
SFB3YHR098C DAS1P47005 663 aa6.17□□□□□ -1.42
SFB3YHR098C PCL10P53124 433 aa6.17□□□□□ -1.42
SFB3YHR098C YPR097WQ06839 1073 aa6.17□□□□□ -1.42
SFB3YHR098C CDC8P00572 216 aa6.17□□□□□ -1.42
SFB3YHR098C DPS1P04802 557 aaKnown RBP6.17□□□□□ -1.42
SFB3YHR098C RGP1P16664 663 aa6.17□□□□□ -1.42
SFB3YHR098C CDC11P32458 415 aa6.17□□□□□ -1.42
SFB3YHR098C FZO1P38297 855 aa6.17□□□□□ -1.42
SFB3YHR098C BEM4P39011 633 aa6.17□□□□□ -1.42
SFB3YHR098C NUP60P39705 539 aa6.17□□□□□ -1.42
SFB3YHR098C BOL3P39724 118 aa6.17□□□□□ -1.42
SFB3YHR098C VAC8P39968 578 aa6.17□□□□□ -1.42
SFB3YHR098C INA22P40576 216 aa6.17□□□□□ -1.42
SFB3YHR098C ERG5P54781 538 aa6.17□□□□□ -1.42
SFB3YHR098C YLR001CQ07895 862 aa6.17□□□□□ -1.42
SFB3YHR098C RPS6AP0CX37 236 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C RPS6BP0CX38 236 aaPredicted RBP6.16□□□□□ -1.42
SFB3YHR098C MRP7P12687 371 aa6.16□□□□□ -1.42
SFB3YHR098C PRP4P20053 465 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C KTR3P38130 404 aaPredicted RBP6.16□□□□□ -1.42
SFB3YHR098C GLO3P38682 493 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C YFR006WP43590 535 aa6.16□□□□□ -1.42
SFB3YHR098C YKE2P52553 114 aa6.16□□□□□ -1.42
SFB3YHR098C ERP6P53198 216 aa6.16□□□□□ -1.42
SFB3YHR098C ALO1P54783 526 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C TRS120Q04183 1289 aa6.16□□□□□ -1.42
SFB3YHR098C RIB2Q12362 591 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SFB3YHR098C LPD1P09624 499 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C RPS24AP0CX31 135 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C RPS24BP0CX32 135 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C MATALPHA2P0CY08 210 aa6.16□□□□□ -1.42
SFB3YHR098C HMLALPHA2P0CY09 210 aa6.16□□□□□ -1.42
SFB3YHR098C MTF2P10849 440 aa6.16□□□□□ -1.42
SFB3YHR098C CDC10P25342 322 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C PTC3P34221 468 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C ADE17P38009 592 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C PCS60P38137 543 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
SFB3YHR098C UBP12P39538 1254 aa6.16□□□□□ -1.42
SFB3YHR098C PEA2P40091 420 aa6.16□□□□□ -1.42
SFB3YHR098C GVP36P40531 326 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C MTR4P47047 1073 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C TMA22P47089 198 aaPredicted RBP6.16□□□□□ -1.42
SFB3YHR098C ARI1P53111 347 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C IST1P53843 298 aaPredicted RBP6.16□□□□□ -1.42
SFB3YHR098C GTR1Q00582 310 aa6.16□□□□□ -1.42
SFB3YHR098C HCR1Q05775 265 aaKnown RBP6.16□□□□□ -1.42
SFB3YHR098C SCJ1P25303 377 aa6.15□□□□□ -1.42
SFB3YHR098C CDC48P25694 835 aaKnown RBP6.15□□□□□ -1.42
SFB3YHR098C MET1P36150 593 aa6.15□□□□□ -1.42
SFB3YHR098C TDA11P38854 504 aa6.15□□□□□ -1.42
SFB3YHR098C NIS1P53939 407 aa6.15□□□□□ -1.42
SFB3YHR098C GFD1Q04839 188 aaKnown RBP6.15□□□□□ -1.42
SFB3YHR098C YLR407WQ06070 228 aa6.15□□□□□ -1.42
SFB3YHR098C BDF2Q07442 638 aa6.15□□□□□ -1.42
SFB3YHR098C GPI13Q07830 1017 aa6.15□□□□□ -1.42
SFB3YHR098C TYR1P20049 452 aa6.15□□□□□ -1.43
SFB3YHR098C RAD57P25301 460 aa6.15□□□□□ -1.43
SFB3YHR098C FBP26P32604 452 aa6.15□□□□□ -1.43
SFB3YHR098C LIN1P38852 340 aaPredicted RBP6.15□□□□□ -1.43
SFB3YHR098C VHR2P40041 505 aa6.15□□□□□ -1.43
SFB3YHR098C VID27P40157 782 aa6.15□□□□□ -1.43
SFB3YHR098C AIM21P40563 679 aa6.15□□□□□ -1.43
SFB3YHR098C EPL1P43572 832 aa6.15□□□□□ -1.43
SFB3YHR098C ATG1P53104 897 aa6.15□□□□□ -1.43
SFB3YHR098C SFB2P53953 876 aa6.15□□□□□ -1.43
SFB3YHR098C NGL3Q03210 505 aa6.15□□□□□ -1.43
SFB3YHR098C HMI1Q12039 706 aa6.15□□□□□ -1.43
SFB3YHR098C GNT1Q12096 491 aa6.15□□□□□ -1.43
SFB3YHR098C RAD59Q12223 238 aa6.15□□□□□ -1.43
SFB3YHR098C OCA6Q12454 224 aa6.15□□□□□ -1.43
SFB3YHR098C NCB2Q92317 146 aa6.15□□□□□ -1.43
SFB3YHR098C PIF1P07271 859 aa6.14□□□□□ -1.43
SFB3YHR098C RPC19P28000 142 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C SEC20P28791 383 aa6.14□□□□□ -1.43
SFB3YHR098C NPL6P32832 435 aa6.14□□□□□ -1.43
SFB3YHR098C YET1P35723 206 aa6.14□□□□□ -1.43
SFB3YHR098C FUI1P38196 639 aa6.14□□□□□ -1.43
SFB3YHR098C SHQ1P40486 507 aaPredicted RBP6.14□□□□□ -1.43
SFB3YHR098C AXL1P40851 1208 aa6.14□□□□□ -1.43
SFB3YHR098C PXA1P41909 870 aa6.14□□□□□ -1.43
SFB3YHR098C GCN20P43535 752 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C VTC2P43585 828 aa6.14□□□□□ -1.43
SFB3YHR098C YNL144CP53907 740 aa6.14□□□□□ -1.43
SFB3YHR098C ASI1P54074 624 aa6.14□□□□□ -1.43
SFB3YHR098C GGA1Q06336 557 aa6.14□□□□□ -1.43
SFB3YHR098C OSW1Q08692 278 aa6.14□□□□□ -1.43
SFB3YHR098C UTP10P42945 1769 aaKnown RBP6.14□□□□□ -1.43
SFB3YHR098C TY4B-PA0A0B7P3V8 1104 aa6.14□□□□□ -1.43
SFB3YHR098C HXK1P04806 485 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms