RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C SRP40P32583 406 aaPredicted RBP2.66□□□□□ -1.98
VMR1YHL035C PBP2P38151 413 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
VMR1YHL035C SEA4P38164 1038 aa2.66□□□□□ -1.98
VMR1YHL035C ALG12P53730 551 aa2.66□□□□□ -1.98
VMR1YHL035C DOT1Q04089 582 aaKnown RBP2.66□□□□□ -1.98
VMR1YHL035C CDC11P32458 415 aa2.66□□□□□ -1.98
VMR1YHL035C YKE2P52553 114 aa2.66□□□□□ -1.98
VMR1YHL035C BUL2Q03758 920 aaKnown RBP2.66□□□□□ -1.98
VMR1YHL035C OSH2Q12451 1283 aa2.66□□□□□ -1.98
VMR1YHL035C RAD4P14736 754 aa2.65□□□□□ -1.98
VMR1YHL035C CDC12P32468 407 aaKnown RBP2.65□□□□□ -1.98
VMR1YHL035C SPC42P36094 363 aa2.65□□□□□ -1.98
VMR1YHL035C TED1P40533 473 aa2.65□□□□□ -1.98
VMR1YHL035C INO1P11986 533 aa2.65□□□□□ -1.98
VMR1YHL035C MSB1P21339 1137 aaKnown RBP2.65□□□□□ -1.98
VMR1YHL035C SLA2P33338 968 aa2.65□□□□□ -1.98
VMR1YHL035C MSH4P40965 878 aaPredicted RBP2.65□□□□□ -1.98
VMR1YHL035C HOS3Q02959 697 aaKnown RBP2.65□□□□□ -1.98
VMR1YHL035C SIZ1Q04195 904 aa2.65□□□□□ -1.98
VMR1YHL035C FLC1Q08967 793 aa2.65□□□□□ -1.98
VMR1YHL035C YPL066WQ12194 479 aa2.65□□□□□ -1.98
VMR1YHL035C PTC5Q12511 572 aa2.65□□□□□ -1.98
VMR1YHL035C ERS1P17261 260 aa2.65□□□□□ -1.99
VMR1YHL035C HBS1P32769 611 aaKnown RBP2.65□□□□□ -1.99
VMR1YHL035C SIP5P40210 489 aaKnown RBP2.65□□□□□ -1.99
VMR1YHL035C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
VMR1YHL035C COQ4O13525 335 aa2.65□□□□□ -1.99
VMR1YHL035C SRP1Q02821 542 aaKnown RBP2.65□□□□□ -1.99
VMR1YHL035C PUS7Q08647 676 aaKnown RBP2.65□□□□□ -1.99
VMR1YHL035C RET1P22276 1149 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C RRM3P38766 723 aa2.64□□□□□ -1.99
VMR1YHL035C RSP5P39940 809 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C CIT3P43635 486 aa2.64□□□□□ -1.99
VMR1YHL035C GYP7P48365 746 aa2.64□□□□□ -1.99
VMR1YHL035C MDM12Q92328 271 aa2.64□□□□□ -1.99
VMR1YHL035C MSH2P25847 964 aa2.64□□□□□ -1.99
VMR1YHL035C FUN30P31380 1131 aa2.64□□□□□ -1.99
VMR1YHL035C YSC84P32793 468 aa2.64□□□□□ -1.99
VMR1YHL035C STE5P32917 917 aa2.64□□□□□ -1.99
VMR1YHL035C YKL091CP33324 310 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C YKL069WP36088 180 aa2.64□□□□□ -1.99
VMR1YHL035C CCZ1P38273 704 aa2.64□□□□□ -1.99
VMR1YHL035C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
VMR1YHL035C YLR257WQ06146 321 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C YBR184WP38299 523 aa2.64□□□□□ -1.99
VMR1YHL035C PAF1P38351 445 aa2.64□□□□□ -1.99
VMR1YHL035C CDC53Q12018 815 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C RPP2AP05319 106 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C SAM35P14693 329 aa2.64□□□□□ -1.99
VMR1YHL035C NFS1P25374 497 aa2.64□□□□□ -1.99
VMR1YHL035C BOI2P39969 1040 aa2.64□□□□□ -1.99
VMR1YHL035C CCM1P48237 864 aaPredicted RBP2.64□□□□□ -1.99
VMR1YHL035C HUL5P53119 910 aa2.64□□□□□ -1.99
VMR1YHL035C RAT1Q02792 1006 aaKnown RBP2.64□□□□□ -1.99
VMR1YHL035C GIC2Q06648 383 aa2.64□□□□□ -1.99
VMR1YHL035C YDR215CQ12240 137 aa2.64□□□□□ -1.99
VMR1YHL035C RPL11AP0C0W9 174 aaKnown RBP2.63□□□□□ -1.99
VMR1YHL035C SAF1P38352 637 aa2.63□□□□□ -1.99
VMR1YHL035C HUL4P40985 892 aa2.63□□□□□ -1.99
VMR1YHL035C NOP2P40991 618 aaKnown RBP2.63□□□□□ -1.99
VMR1YHL035C LCD1Q04377 747 aa2.63□□□□□ -1.99
VMR1YHL035C AOS1Q06624 347 aa2.63□□□□□ -1.99
VMR1YHL035C RPL11BQ3E757 174 aaPredicted RBP2.63□□□□□ -1.99
VMR1YHL035C BAS1P22035 811 aa2.63□□□□□ -1.99
VMR1YHL035C KIP1P28742 1111 aa2.63□□□□□ -1.99
VMR1YHL035C TIM54P47045 478 aa2.63□□□□□ -1.99
VMR1YHL035C KIP3P53086 805 aaKnown RBP2.63□□□□□ -1.99
VMR1YHL035C RNH70P53331 553 aa2.63□□□□□ -1.99
VMR1YHL035C SPP382Q06411 708 aaPredicted RBP2.63□□□□□ -1.99
VMR1YHL035C SPO21Q12411 609 aa2.63□□□□□ -1.99
VMR1YHL035C CAN1P04817 590 aa2.63□□□□□ -1.99
VMR1YHL035C PET10P36139 283 aa2.63□□□□□ -1.99
VMR1YHL035C ICP55P40051 511 aa2.63□□□□□ -1.99
VMR1YHL035C RPS4AP0CX35 261 aaKnown RBP2.62□□□□□ -1.99
VMR1YHL035C RPS4BP0CX36 261 aaKnown RBP2.62□□□□□ -1.99
VMR1YHL035C PUF4P25339 888 aaKnown RBP RIP-Chip data2.62□□□□□ -1.99not detected
VMR1YHL035C SPO74P45819 413 aa2.62□□□□□ -1.99
VMR1YHL035C ATP25Q03153 612 aa2.62□□□□□ -1.99
VMR1YHL035C NUP82P40368 713 aa2.62□□□□□ -1.99
VMR1YHL035C MMM1P41800 426 aa2.62□□□□□ -1.99
VMR1YHL035C UBP6P43593 499 aaKnown RBP2.62□□□□□ -1.99
VMR1YHL035C YMR074CQ04773 145 aa2.62□□□□□ -1.99
VMR1YHL035C PHO8P11491 566 aa2.62□□□□□ -1.99
VMR1YHL035C UGA2P38067 497 aa2.62□□□□□ -1.99
VMR1YHL035C YGL176CP46945 554 aa2.62□□□□□ -1.99
VMR1YHL035C YDL124WQ07551 312 aaKnown RBP2.62□□□□□ -1.99
VMR1YHL035C NBA1Q08229 501 aaKnown RBP2.62□□□□□ -1.99
VMR1YHL035C YER152CP10356 443 aa2.62□□□□□ -1.99
VMR1YHL035C YVC1Q12324 675 aa2.62□□□□□ -1.99
VMR1YHL035C YPR053CQ6Q5F3 151 aa2.62□□□□□ -1.99
VMR1YHL035C ATG19P35193 415 aa2.61□□□□□ -1.99
VMR1YHL035C GPT2P36148 743 aa2.61□□□□□ -1.99
VMR1YHL035C MTC3P53077 123 aa2.61□□□□□ -1.99
VMR1YHL035C EAF1Q06337 982 aa2.61□□□□□ -1.99
VMR1YHL035C ADE8P04161 214 aa2.61□□□□□ -1.99
VMR1YHL035C MLS1P30952 554 aa2.61□□□□□ -1.99
VMR1YHL035C ABD1P32783 436 aaPredicted RBP2.61□□□□□ -1.99
VMR1YHL035C PEX7P39108 375 aa2.61□□□□□ -1.99
VMR1YHL035C MAL11P53048 616 aa2.61□□□□□ -1.99
VMR1YHL035C MTC5Q03897 1148 aa2.61□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms