RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W SPC105P53148 917 aa6.09□□□□□ -1.43
PDE1YGL248W ERO1Q03103 563 aa6.09□□□□□ -1.43
PDE1YGL248W TDA5Q06417 326 aaKnown RBP6.09□□□□□ -1.43
PDE1YGL248W SGT2Q12118 346 aaKnown RBP6.09□□□□□ -1.43
PDE1YGL248W SST2P11972 698 aaKnown RBP6.08□□□□□ -1.44
PDE1YGL248W URA1P28272 314 aaPredicted RBP6.08□□□□□ -1.44
PDE1YGL248W GCD6P32501 712 aaKnown RBP6.08□□□□□ -1.44
PDE1YGL248W YKL100CP34248 587 aa6.08□□□□□ -1.44
PDE1YGL248W RXT2P38255 430 aa6.08□□□□□ -1.44
PDE1YGL248W RSP5P39940 809 aaKnown RBP6.08□□□□□ -1.44
PDE1YGL248W YJR120WP47157 116 aa6.08□□□□□ -1.44
PDE1YGL248W YGR016WP53209 190 aa6.08□□□□□ -1.44
PDE1YGL248W BUD9P53226 547 aa6.08□□□□□ -1.44
PDE1YGL248W RSC1P53236 928 aa6.08□□□□□ -1.44
PDE1YGL248W GIS4Q04233 774 aa6.08□□□□□ -1.44
PDE1YGL248W VTI1Q04338 217 aa6.08□□□□□ -1.44
PDE1YGL248W RRP9Q06506 573 aaKnown RBP6.08□□□□□ -1.44
PDE1YGL248W FLC1Q08967 793 aa6.08□□□□□ -1.44
PDE1YGL248W CLF1Q12309 687 aaPredicted RBP6.08□□□□□ -1.44
PDE1YGL248W RPC31P17890 251 aa6.07□□□□□ -1.44
PDE1YGL248W VAN1P23642 535 aa6.07□□□□□ -1.44
PDE1YGL248W SMY2P32909 740 aaKnown RBP6.07□□□□□ -1.44
PDE1YGL248W GGA2P38817 585 aaKnown RBP6.07□□□□□ -1.44
PDE1YGL248W ATP22P50273 684 aaPredicted RBP6.07□□□□□ -1.44
PDE1YGL248W HOL1P53389 586 aa6.07□□□□□ -1.44
PDE1YGL248W YNL058CP53947 316 aa6.07□□□□□ -1.44
PDE1YGL248W BUL2Q03758 920 aaKnown RBP6.07□□□□□ -1.44
PDE1YGL248W TRS120Q04183 1289 aa6.07□□□□□ -1.44
PDE1YGL248W SPT7P35177 1332 aa6.06□□□□□ -1.44
PDE1YGL248W ACE2P21192 770 aa6.06□□□□□ -1.44
PDE1YGL248W PXA2P34230 853 aa6.06□□□□□ -1.44
PDE1YGL248W MAC1P35192 417 aa6.06□□□□□ -1.44
PDE1YGL248W QDR2P40474 542 aa6.06□□□□□ -1.44
PDE1YGL248W PIP2P52960 996 aa6.06□□□□□ -1.44
PDE1YGL248W TYW3P53177 273 aa6.06□□□□□ -1.44
PDE1YGL248W YGR122WP53272 402 aa6.06□□□□□ -1.44
PDE1YGL248W BTN2P53286 410 aa6.06□□□□□ -1.44
PDE1YGL248W YNR040WP53736 256 aa6.06□□□□□ -1.44
PDE1YGL248W ALO1P54783 526 aaKnown RBP6.06□□□□□ -1.44
PDE1YGL248W NTG2Q08214 380 aa6.06□□□□□ -1.44
PDE1YGL248W YOL087CQ99247 1116 aa6.06□□□□□ -1.44
PDE1YGL248W NAT1P12945 854 aaKnown RBP6.05□□□□□ -1.44
PDE1YGL248W CYC8P14922 966 aa6.05□□□□□ -1.44
PDE1YGL248W NAB2P32505 525 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44 RIP-Chip
PDE1YGL248W VPS35P34110 944 aa6.05□□□□□ -1.44
PDE1YGL248W YHR020WP38708 688 aaKnown RBP6.05□□□□□ -1.44
PDE1YGL248W SPF1P39986 1215 aaKnown RBP6.05□□□□□ -1.44
PDE1YGL248W ATG13Q06628 738 aa6.05□□□□□ -1.44
PDE1YGL248W GPI13Q07830 1017 aa6.05□□□□□ -1.44
PDE1YGL248W LSO1Q3E827 93 aa6.05□□□□□ -1.44
PDE1YGL248W ERR1P0CX10 437 aa6.04□□□□□ -1.44
PDE1YGL248W ERR2P0CX11 437 aa6.04□□□□□ -1.44
PDE1YGL248W AAD3P25612 363 aa6.04□□□□□ -1.44
PDE1YGL248W STO1P34160 861 aaKnown RBP6.04□□□□□ -1.44
PDE1YGL248W NUP120P35729 1037 aa6.04□□□□□ -1.44
PDE1YGL248W EXO84P38261 753 aa6.04□□□□□ -1.44
PDE1YGL248W ESL1P40456 1118 aa6.04□□□□□ -1.44
PDE1YGL248W CWH41P53008 833 aa6.04□□□□□ -1.44
PDE1YGL248W BNI5P53890 448 aaKnown RBP6.04□□□□□ -1.44
PDE1YGL248W TGL2P54857 326 aa6.04□□□□□ -1.44
PDE1YGL248W OPI10Q08202 246 aa6.04□□□□□ -1.44
PDE1YGL248W OXR1Q08952 273 aa6.04□□□□□ -1.44
PDE1YGL248W RRP6Q12149 733 aaKnown RBP6.04□□□□□ -1.44
PDE1YGL248W MED1Q12321 566 aa6.04□□□□□ -1.44
PDE1YGL248W MPD2Q99316 277 aa6.04□□□□□ -1.44
PDE1YGL248W AI3P03877 415 aa6.03□□□□□ -1.44
PDE1YGL248W PRI2P20457 528 aa6.03□□□□□ -1.44
PDE1YGL248W RAD51P25454 400 aa6.03□□□□□ -1.44
PDE1YGL248W MOT2P34909 587 aaKnown RBP6.03□□□□□ -1.44
PDE1YGL248W RIM4P38741 713 aa6.03□□□□□ -1.44
PDE1YGL248W MXR1P40029 184 aa6.03□□□□□ -1.44
PDE1YGL248W TMA108P40462 946 aa6.03□□□□□ -1.44
PDE1YGL248W MNT3P40549 630 aa6.03□□□□□ -1.44
PDE1YGL248W UBA2P52488 636 aa6.03□□□□□ -1.44
PDE1YGL248W YML131WQ03102 365 aa6.03□□□□□ -1.44
PDE1YGL248W YSH1Q06224 779 aaPredicted RBP6.03□□□□□ -1.44
PDE1YGL248W RSC2Q06488 889 aa6.03□□□□□ -1.44
PDE1YGL248W REH1Q06709 432 aa6.03□□□□□ -1.44
PDE1YGL248W SPO75Q07798 868 aa6.03□□□□□ -1.44
PDE1YGL248W PSR1Q07800 427 aa6.03□□□□□ -1.44
PDE1YGL248W MDM38Q08179 573 aa6.03□□□□□ -1.44
PDE1YGL248W APC5Q08683 685 aa6.03□□□□□ -1.44
PDE1YGL248W OSH2Q12451 1283 aa6.03□□□□□ -1.44
PDE1YGL248W TRS33Q99394 268 aa6.03□□□□□ -1.44
PDE1YGL248W SAC3P46674 1301 aa6.02□□□□□ -1.45
PDE1YGL248W NUP145P49687 1317 aa6.02□□□□□ -1.45
PDE1YGL248W TPM1P17536 199 aaKnown RBP6.02□□□□□ -1.45
PDE1YGL248W PTP2P29461 750 aa6.02□□□□□ -1.45
PDE1YGL248W CHS3P29465 1165 aa6.02□□□□□ -1.45
PDE1YGL248W IMP2'P32351 346 aa6.02□□□□□ -1.45
PDE1YGL248W VMA8P32610 256 aaKnown RBP6.02□□□□□ -1.45
PDE1YGL248W YBR071WP38243 211 aa6.02□□□□□ -1.45
PDE1YGL248W RRM3P38766 723 aa6.02□□□□□ -1.45
PDE1YGL248W RRP8P38961 392 aaKnown RBP6.02□□□□□ -1.45
PDE1YGL248W PEX14P53112 341 aa6.02□□□□□ -1.45
PDE1YGL248W ENV11P53246 860 aa6.02□□□□□ -1.45
PDE1YGL248W YGR125WP53273 1036 aa6.02□□□□□ -1.45
PDE1YGL248W PAP2P53632 584 aaKnown RBP6.02□□□□□ -1.45
PDE1YGL248W COG6P53959 839 aa6.02□□□□□ -1.45
PDE1YGL248W TFB2Q02939 513 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms