RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C GNT1Q12096 491 aa6.98□□□□□ -1.29
LSM6YDR378C SPO21Q12411 609 aa6.98□□□□□ -1.29
LSM6YDR378C AKR1P39010 764 aa6.97□□□□□ -1.29
LSM6YDR378C TPP1Q03796 238 aa6.97□□□□□ -1.29
LSM6YDR378C PUS1Q12211 544 aaKnown RBP6.97□□□□□ -1.29
LSM6YDR378C NAM7P30771 971 aaKnown RBP6.96□□□□□ -1.3
LSM6YDR378C PBY1P38254 753 aa6.96□□□□□ -1.3
LSM6YDR378C NMD3P38861 518 aaKnown RBP6.96□□□□□ -1.3
LSM6YDR378C HUL5P53119 910 aa6.96□□□□□ -1.3
LSM6YDR378C SPP382Q06411 708 aaPredicted RBP6.96□□□□□ -1.3
LSM6YDR378C BDF2Q07442 638 aa6.96□□□□□ -1.3
LSM6YDR378C PUS7Q08647 676 aaKnown RBP6.96□□□□□ -1.3
LSM6YDR378C OSH2Q12451 1283 aa6.96□□□□□ -1.3
LSM6YDR378C COQ2P32378 372 aa6.95□□□□□ -1.3
LSM6YDR378C SKN7P38889 622 aa6.95□□□□□ -1.3
LSM6YDR378C MMM1P41800 426 aa6.95□□□□□ -1.3
LSM6YDR378C OSW7P43611 510 aa6.95□□□□□ -1.3
LSM6YDR378C YPL066WQ12194 479 aa6.95□□□□□ -1.3
LSM6YDR378C STE5P32917 917 aa6.94□□□□□ -1.3
LSM6YDR378C GPB2P39717 880 aa6.94□□□□□ -1.3
LSM6YDR378C YJL045WP47052 634 aa6.94□□□□□ -1.3
LSM6YDR378C YOR059CQ08448 450 aaKnown RBP6.94□□□□□ -1.3
LSM6YDR378C YER152CP10356 443 aa6.93□□□□□ -1.3
LSM6YDR378C SAF1P38352 637 aa6.93□□□□□ -1.3
LSM6YDR378C MBP1P39678 833 aa6.93□□□□□ -1.3
LSM6YDR378C CIT3P43635 486 aa6.93□□□□□ -1.3
LSM6YDR378C HOS3Q02959 697 aaKnown RBP6.93□□□□□ -1.3
LSM6YDR378C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
LSM6YDR378C SBP1P10080 294 aaKnown RBP6.92□□□□□ -1.3
LSM6YDR378C RPN3P40016 523 aaKnown RBP6.92□□□□□ -1.3
LSM6YDR378C YGR125WP53273 1036 aa6.92□□□□□ -1.3
LSM6YDR378C YPL034WQ03083 165 aa6.92□□□□□ -1.3
LSM6YDR378C EAR1Q03212 550 aa6.92□□□□□ -1.3
LSM6YDR378C RPN4Q03465 531 aa6.92□□□□□ -1.3
LSM6YDR378C EAF1Q06337 982 aa6.92□□□□□ -1.3
LSM6YDR378C FMP25Q08023 583 aa6.92□□□□□ -1.3
LSM6YDR378C MCA1Q08601 432 aa6.92□□□□□ -1.3
LSM6YDR378C CHS2P14180 963 aa6.91□□□□□ -1.3
LSM6YDR378C PRP9P19736 530 aaKnown RBP6.91□□□□□ -1.3
LSM6YDR378C HSP60P19882 572 aaKnown RBP6.91□□□□□ -1.3
LSM6YDR378C RPL8BP29453 256 aaKnown RBP6.91□□□□□ -1.3
LSM6YDR378C YSC84P32793 468 aa6.91□□□□□ -1.3
LSM6YDR378C WHI3P34761 661 aaKnown RBP6.91□□□□□ -1.3
LSM6YDR378C ERP6P53198 216 aa6.91□□□□□ -1.3
LSM6YDR378C TNA1P53322 534 aa6.91□□□□□ -1.3
LSM6YDR378C FLC1Q08967 793 aa6.91□□□□□ -1.3
LSM6YDR378C COQ4O13525 335 aa6.9□□□□□ -1.3
LSM6YDR378C ARE1P25628 610 aa6.9□□□□□ -1.3
LSM6YDR378C SCT1P32784 759 aa6.9□□□□□ -1.3
LSM6YDR378C RCM1P53972 490 aa6.9□□□□□ -1.3
LSM6YDR378C NSI1Q12457 570 aa6.9□□□□□ -1.3
LSM6YDR378C RPL11AP0C0W9 174 aaKnown RBP6.89□□□□□ -1.31
LSM6YDR378C MSB1P21339 1137 aaKnown RBP6.89□□□□□ -1.31
LSM6YDR378C PNT1P38969 423 aa6.89□□□□□ -1.31
LSM6YDR378C SIP5P40210 489 aaKnown RBP6.89□□□□□ -1.31
LSM6YDR378C YVC1Q12324 675 aa6.89□□□□□ -1.31
LSM6YDR378C RPL11BQ3E757 174 aaPredicted RBP6.89□□□□□ -1.31
LSM6YDR378C PGM1P33401 570 aaKnown RBP6.88□□□□□ -1.31
LSM6YDR378C KAE1P36132 386 aa6.88□□□□□ -1.31
LSM6YDR378C PBP2P38151 413 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
LSM6YDR378C YHL012WP38709 493 aa6.88□□□□□ -1.31
LSM6YDR378C GGA2P38817 585 aaKnown RBP6.88□□□□□ -1.31
LSM6YDR378C GEM1P39722 662 aa6.88□□□□□ -1.31
LSM6YDR378C CHZ1P40019 153 aaPredicted RBP6.88□□□□□ -1.31
LSM6YDR378C ALR2P43553 858 aa6.88□□□□□ -1.31
LSM6YDR378C UTP8P53276 713 aaKnown RBP6.88□□□□□ -1.31
LSM6YDR378C TPO2P53283 614 aa6.88□□□□□ -1.31
LSM6YDR378C CIT1P00890 479 aa6.87□□□□□ -1.31
LSM6YDR378C YHR020WP38708 688 aaKnown RBP6.87□□□□□ -1.31
LSM6YDR378C RSP5P39940 809 aaKnown RBP6.87□□□□□ -1.31
LSM6YDR378C MXR1P40029 184 aa6.87□□□□□ -1.31
LSM6YDR378C HUL4P40985 892 aa6.87□□□□□ -1.31
LSM6YDR378C PFD1P46988 109 aa6.87□□□□□ -1.31
LSM6YDR378C CIT2P08679 460 aa6.86□□□□□ -1.31
LSM6YDR378C PPG1P32838 368 aa6.86□□□□□ -1.31
LSM6YDR378C MDL2P33311 773 aa6.86□□□□□ -1.31
LSM6YDR378C CCZ1P38273 704 aa6.86□□□□□ -1.31
LSM6YDR378C NMD2P38798 1089 aaKnown RBP6.86□□□□□ -1.31
LSM6YDR378C BUD6P41697 788 aa6.86□□□□□ -1.31
LSM6YDR378C RNH70P53331 553 aa6.86□□□□□ -1.31
LSM6YDR378C YDR306CQ06640 478 aa6.86□□□□□ -1.31
LSM6YDR378C ACM1Q08981 209 aa6.86□□□□□ -1.31
LSM6YDR378C YLR122CQ12312 125 aa6.86□□□□□ -1.31
LSM6YDR378C THS1P04801 734 aaKnown RBP6.85□□□□□ -1.31
LSM6YDR378C GAL11P19659 1081 aa6.85□□□□□ -1.31
LSM6YDR378C DBP2P24783 546 aaKnown RBP6.85□□□□□ -1.31
LSM6YDR378C SRO9P25567 434 aaKnown RBP6.85□□□□□ -1.31
LSM6YDR378C UBX5Q06682 500 aa6.85□□□□□ -1.31
LSM6YDR378C NBA1Q08229 501 aaKnown RBP6.85□□□□□ -1.31
LSM6YDR378C AAR2P32357 355 aaPredicted RBP6.84□□□□□ -1.31
LSM6YDR378C CDC11P32458 415 aa6.84□□□□□ -1.31
LSM6YDR378C PIK1P39104 1066 aa6.84□□□□□ -1.31
LSM6YDR378C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
LSM6YDR378C SRP1Q02821 542 aaKnown RBP6.84□□□□□ -1.31
LSM6YDR378C DUS3Q06053 668 aaKnown RBP6.84□□□□□ -1.31
LSM6YDR378C RSB1Q08417 382 aa6.84□□□□□ -1.31
LSM6YDR378C TRE1Q08919 783 aa6.84□□□□□ -1.31
LSM6YDR378C SAM35P14693 329 aa6.83□□□□□ -1.32
LSM6YDR378C UGA2P38067 497 aa6.83□□□□□ -1.32
LSM6YDR378C BAP2P38084 609 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms