RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W RET3P53600 189 aa1.64□□□□□ -2.15
SPC110YDR356W ELA1P53861 379 aaPredicted RBP1.64□□□□□ -2.15
SPC110YDR356W ADE12P80210 433 aaKnown RBP1.64□□□□□ -2.15
SPC110YDR356W SEC5P89102 971 aa1.64□□□□□ -2.15
SPC110YDR356W RRN5Q02983 363 aa1.64□□□□□ -2.15
SPC110YDR356W FCP1Q03254 732 aa1.64□□□□□ -2.15
SPC110YDR356W YDR131CQ03899 556 aa1.64□□□□□ -2.15
SPC110YDR356W RPN7Q06103 429 aaKnown RBP1.64□□□□□ -2.15
SPC110YDR356W MRD1Q06106 887 aaKnown RBP1.64□□□□□ -2.15
SPC110YDR356W PSR2Q07949 397 aa1.64□□□□□ -2.15
SPC110YDR356W RIO1Q12196 484 aaKnown RBP1.64□□□□□ -2.15
SPC110YDR356W NUM1Q00402 2748 aa1.64□□□□□ -2.15
SPC110YDR356W UFD4P33202 1483 aa1.63□□□□□ -2.15
SPC110YDR356W FUM1P08417 488 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W HOM3P10869 527 aa1.63□□□□□ -2.15
SPC110YDR356W MIP1P15801 1254 aa1.63□□□□□ -2.15
SPC110YDR356W VPS3P23643 1011 aa1.63□□□□□ -2.15
SPC110YDR356W KIP2P28743 706 aa1.63□□□□□ -2.15
SPC110YDR356W FUN30P31380 1131 aa1.63□□□□□ -2.15
SPC110YDR356W RTG2P32608 588 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W MRP4P32902 394 aa1.63□□□□□ -2.15
SPC110YDR356W AFR1P33304 620 aa1.63□□□□□ -2.15
SPC110YDR356W MRP8P35719 219 aa1.63□□□□□ -2.15
SPC110YDR356W SEC31P38968 1273 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W IES2P40154 320 aa1.63□□□□□ -2.15
SPC110YDR356W AIM20P40451 204 aa1.63□□□□□ -2.15
SPC110YDR356W TAF4P50105 388 aa1.63□□□□□ -2.15
SPC110YDR356W SHE4P51534 789 aa1.63□□□□□ -2.15
SPC110YDR356W MDR1P53258 950 aa1.63□□□□□ -2.15
SPC110YDR356W PGA2P53903 129 aa1.63□□□□□ -2.15
SPC110YDR356W TFB3Q03290 321 aa1.63□□□□□ -2.15
SPC110YDR356W BUL2Q03758 920 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W BCH1Q05029 724 aa1.63□□□□□ -2.15
SPC110YDR356W ORM2Q06144 216 aa1.63□□□□□ -2.15
SPC110YDR356W TIP41Q12199 356 aa1.63□□□□□ -2.15
SPC110YDR356W NFI1Q12216 726 aa1.63□□□□□ -2.15
SPC110YDR356W SMC6Q12749 1114 aa1.63□□□□□ -2.15
SPC110YDR356W RAD50P12753 1312 aa1.63□□□□□ -2.15
SPC110YDR356W LAM4P38800 1345 aa1.63□□□□□ -2.15
SPC110YDR356W FOB1O13329 566 aa1.63□□□□□ -2.15
SPC110YDR356W SCP160P06105 1222 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15 RIP-Chip
SPC110YDR356W HNM1P19807 563 aa1.63□□□□□ -2.15
SPC110YDR356W REC107P21651 314 aa1.63□□□□□ -2.15
SPC110YDR356W RAD16P31244 790 aa1.63□□□□□ -2.15
SPC110YDR356W ARC19P33204 171 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W RPT3P33298 428 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W MOT2P34909 587 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W RRP1P35178 278 aaPredicted RBP1.63□□□□□ -2.15
SPC110YDR356W YKR018CP36114 725 aa1.63□□□□□ -2.15
SPC110YDR356W MTW1P39731 289 aa1.63□□□□□ -2.15
SPC110YDR356W KHA1P40309 873 aa1.63□□□□□ -2.15
SPC110YDR356W RET2P43621 546 aa1.63□□□□□ -2.15
SPC110YDR356W ROK1P45818 564 aaPredicted RBP1.63□□□□□ -2.15
SPC110YDR356W SUM1P46676 1062 aa1.63□□□□□ -2.15
SPC110YDR356W PMT3P47190 753 aa1.63□□□□□ -2.15
SPC110YDR356W ALT1P52893 592 aa1.63□□□□□ -2.15
SPC110YDR356W BRE5P53741 515 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W ARP5P53946 755 aa1.63□□□□□ -2.15
SPC110YDR356W INP2Q03824 705 aa1.63□□□□□ -2.15
SPC110YDR356W PIG1Q06216 648 aa1.63□□□□□ -2.15
SPC110YDR356W YLR125WQ12138 136 aa1.63□□□□□ -2.15
SPC110YDR356W REC8Q12188 680 aa1.63□□□□□ -2.15
SPC110YDR356W ESP1Q03018 1630 aa1.63□□□□□ -2.15
SPC110YDR356W NUP157P40064 1391 aaKnown RBP1.63□□□□□ -2.15
SPC110YDR356W NUP170P38181 1502 aa1.63□□□□□ -2.15
SPC110YDR356W SEC63P14906 663 aa1.62□□□□□ -2.15
SPC110YDR356W SIT4P20604 311 aa1.62□□□□□ -2.15
SPC110YDR356W LCB1P25045 558 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W RSC6P25632 483 aa1.62□□□□□ -2.15
SPC110YDR356W CPS1P27614 576 aa1.62□□□□□ -2.15
SPC110YDR356W THI4P32318 326 aa1.62□□□□□ -2.15
SPC110YDR356W KAP122P32767 1081 aa1.62□□□□□ -2.15
SPC110YDR356W SMY2P32909 740 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W MKS1P34072 584 aa1.62□□□□□ -2.15
SPC110YDR356W LOT5P34234 306 aa1.62□□□□□ -2.15
SPC110YDR356W DBP7P36120 742 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W UBP14P38237 781 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W RXT2P38255 430 aa1.62□□□□□ -2.15
SPC110YDR356W ATG14P38270 344 aa1.62□□□□□ -2.15
SPC110YDR356W APE4P38821 490 aa1.62□□□□□ -2.15
SPC110YDR356W KEL1P38853 1164 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W UTP9P38882 575 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W YHB1P39676 399 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W MEF2P39677 819 aa1.62□□□□□ -2.15
SPC110YDR356W JEM1P40358 645 aa1.62□□□□□ -2.15
SPC110YDR356W YIR014WP40570 242 aa1.62□□□□□ -2.15
SPC110YDR356W PHB1P40961 287 aa1.62□□□□□ -2.15
SPC110YDR356W UBP15P50101 1230 aa1.62□□□□□ -2.15
SPC110YDR356W MNP1P53163 194 aaPredicted RBP1.62□□□□□ -2.15
SPC110YDR356W SPO1P53541 631 aa1.62□□□□□ -2.15
SPC110YDR356W HDA1P53973 706 aa1.62□□□□□ -2.15
SPC110YDR356W CTR9P89105 1077 aa1.62□□□□□ -2.15
SPC110YDR356W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SPC110YDR356W FOX2Q02207 900 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W VPS16Q03308 798 aa1.62□□□□□ -2.15
SPC110YDR356W STE20Q03497 939 aaKnown RBP1.62□□□□□ -2.15
SPC110YDR356W SPR28Q04921 423 aa1.62□□□□□ -2.15
SPC110YDR356W VPS74Q06385 345 aa1.62□□□□□ -2.15
SPC110YDR356W ARV1Q06541 321 aa1.62□□□□□ -2.15
SPC110YDR356W RSC3Q06639 885 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms