RNA–Protein interactions for RNA: YDR348C

PAL1, Transcript of Protein of unknown function thought to be involved in endocytosis, yeastyeast

Gene PAL1, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAL1YDR348C BRE1Q07457 700 aaKnown RBP5.53□□□□□ -1.52
PAL1YDR348C YOL098CQ12496 1037 aa5.53□□□□□ -1.52
PAL1YDR348C URB1P34241 1764 aaKnown RBP5.53□□□□□ -1.52
PAL1YDR348C PMR1P13586 950 aa5.52□□□□□ -1.53
PAL1YDR348C KRS1P15180 591 aaKnown RBP5.52□□□□□ -1.53
PAL1YDR348C PHO13P19881 312 aa5.52□□□□□ -1.53
PAL1YDR348C PHO87P25360 923 aa5.52□□□□□ -1.53
PAL1YDR348C YBL086CP38177 466 aa5.52□□□□□ -1.53
PAL1YDR348C UBX7P38349 436 aa5.52□□□□□ -1.53
PAL1YDR348C YHL017WP38745 532 aa5.52□□□□□ -1.53
PAL1YDR348C HST3P53687 447 aa5.52□□□□□ -1.53
PAL1YDR348C HDA3Q06623 655 aa5.52□□□□□ -1.53
PAL1YDR348C SLP1Q12232 587 aa5.52□□□□□ -1.53
PAL1YDR348C PGA3Q12746 312 aaKnown RBP5.52□□□□□ -1.53
PAL1YDR348C SMC6Q12749 1114 aa5.52□□□□□ -1.53
PAL1YDR348C MRPS28P21771 286 aa5.51□□□□□ -1.53
PAL1YDR348C AFT1P22149 690 aa5.51□□□□□ -1.53
PAL1YDR348C MCM4P30665 933 aaKnown RBP5.51□□□□□ -1.53
PAL1YDR348C MKS1P34072 584 aa5.51□□□□□ -1.53
PAL1YDR348C RFT1P38206 574 aaPredicted RBP5.51□□□□□ -1.53
PAL1YDR348C CCC2P38995 1004 aa5.51□□□□□ -1.53
PAL1YDR348C ROM1P53046 1155 aa5.51□□□□□ -1.53
PAL1YDR348C ALF1P53904 254 aa5.51□□□□□ -1.53
PAL1YDR348C BOP3P53958 396 aa5.51□□□□□ -1.53
PAL1YDR348C UBX2Q04228 584 aa5.51□□□□□ -1.53
PAL1YDR348C VPS38Q05919 439 aa5.51□□□□□ -1.53
PAL1YDR348C CMS1Q07897 291 aaKnown RBP5.51□□□□□ -1.53
PAL1YDR348C OSH2Q12451 1283 aa5.51□□□□□ -1.53
PAL1YDR348C RAD53P22216 821 aa5.5□□□□□ -1.53
PAL1YDR348C FBP26P32604 452 aa5.5□□□□□ -1.53
PAL1YDR348C PXL1P36166 706 aa5.5□□□□□ -1.53
PAL1YDR348C YSW1P38280 609 aa5.5□□□□□ -1.53
PAL1YDR348C VPS8P39702 1274 aa5.5□□□□□ -1.53
PAL1YDR348C HOS4P40480 1083 aa5.5□□□□□ -1.53
PAL1YDR348C VTC3Q02725 835 aa5.5□□□□□ -1.53
PAL1YDR348C ISU1Q03020 165 aa5.5□□□□□ -1.53
PAL1YDR348C EIS1Q05050 843 aaKnown RBP5.5□□□□□ -1.53
PAL1YDR348C LCB5Q06147 687 aaKnown RBP5.5□□□□□ -1.53
PAL1YDR348C YOL057WQ08225 711 aa5.5□□□□□ -1.53
PAL1YDR348C NCB2Q92317 146 aa5.5□□□□□ -1.53
PAL1YDR348C MATALPHA2P0CY08 210 aa5.49□□□□□ -1.53
PAL1YDR348C HMLALPHA2P0CY09 210 aa5.49□□□□□ -1.53
PAL1YDR348C GAL11P19659 1081 aa5.49□□□□□ -1.53
PAL1YDR348C GAR1P28007 205 aaKnown RBP5.49□□□□□ -1.53
PAL1YDR348C PDB1P32473 366 aaKnown RBP5.49□□□□□ -1.53
PAL1YDR348C YKR018CP36114 725 aa5.49□□□□□ -1.53
PAL1YDR348C KTR3P38130 404 aaPredicted RBP5.49□□□□□ -1.53
PAL1YDR348C ISW1P38144 1129 aa5.49□□□□□ -1.53
PAL1YDR348C CIC1P38779 376 aaKnown RBP5.49□□□□□ -1.53
PAL1YDR348C BUD16P39988 312 aa5.49□□□□□ -1.53
PAL1YDR348C TRS85P46944 698 aa5.49□□□□□ -1.53
PAL1YDR348C ALO1P54783 526 aaKnown RBP5.49□□□□□ -1.53
PAL1YDR348C DFG5Q05031 458 aa5.49□□□□□ -1.53
PAL1YDR348C YDR306CQ06640 478 aa5.49□□□□□ -1.53
PAL1YDR348C TSC13Q99190 310 aa5.49□□□□□ -1.53
PAL1YDR348C JIP3O13555 125 aa5.48□□□□□ -1.53
PAL1YDR348C SEC23P15303 768 aaKnown RBP5.48□□□□□ -1.53
PAL1YDR348C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
PAL1YDR348C SMF1P38925 575 aa5.48□□□□□ -1.53
PAL1YDR348C MRX1P40050 688 aa5.48□□□□□ -1.53
PAL1YDR348C BUD6P41697 788 aa5.48□□□□□ -1.53
PAL1YDR348C ILM1P47155 203 aa5.48□□□□□ -1.53
PAL1YDR348C YKE2P52553 114 aa5.48□□□□□ -1.53
PAL1YDR348C MLC1P53141 149 aa5.48□□□□□ -1.53
PAL1YDR348C SEC5P89102 971 aa5.48□□□□□ -1.53
PAL1YDR348C CUS1Q02554 436 aaPredicted RBP5.48□□□□□ -1.53
PAL1YDR348C ORM2Q06144 216 aa5.48□□□□□ -1.53
PAL1YDR348C YVC1Q12324 675 aa5.48□□□□□ -1.53
PAL1YDR348C TY4A-HQ6Q5P6 413 aa5.48□□□□□ -1.53
PAL1YDR348C STE6P12866 1290 aa5.48□□□□□ -1.53
PAL1YDR348C HAP4P14064 554 aa5.48□□□□□ -1.53
PAL1YDR348C KAR3P17119 729 aa5.48□□□□□ -1.53
PAL1YDR348C ARG1P22768 420 aa5.48□□□□□ -1.53
PAL1YDR348C SEC65P29478 273 aa5.48□□□□□ -1.53
PAL1YDR348C NFU1P32860 256 aa5.48□□□□□ -1.53
PAL1YDR348C RRP14P36080 434 aaKnown RBP5.48□□□□□ -1.53
PAL1YDR348C STM1P39015 273 aaKnown RBP5.48□□□□□ -1.53
PAL1YDR348C RGA1P39083 1007 aa5.48□□□□□ -1.53
PAL1YDR348C PIB2P53191 635 aa5.48□□□□□ -1.53
PAL1YDR348C RPL34AP87262 121 aaPredicted RBP5.48□□□□□ -1.53
PAL1YDR348C ARO80Q04052 950 aa5.48□□□□□ -1.53
PAL1YDR348C YLR407WQ06070 228 aa5.48□□□□□ -1.53
PAL1YDR348C VAC14Q06708 880 aa5.48□□□□□ -1.53
PAL1YDR348C RAD4P14736 754 aa5.47□□□□□ -1.53
PAL1YDR348C MET22P32179 357 aa5.47□□□□□ -1.53
PAL1YDR348C UTR2P32623 467 aa5.47□□□□□ -1.53
PAL1YDR348C SIT1P39980 628 aa5.47□□□□□ -1.53
PAL1YDR348C SLX8P40072 274 aa5.47□□□□□ -1.53
PAL1YDR348C HUL5P53119 910 aa5.47□□□□□ -1.53
PAL1YDR348C PRP43P53131 767 aaKnown RBP5.47□□□□□ -1.53
PAL1YDR348C NCS2P53923 493 aaPredicted RBP5.47□□□□□ -1.53
PAL1YDR348C NSE3Q05541 303 aa5.47□□□□□ -1.53
PAL1YDR348C YSH1Q06224 779 aaPredicted RBP5.47□□□□□ -1.53
PAL1YDR348C NOP6Q07623 225 aaKnown RBP5.47□□□□□ -1.53
PAL1YDR348C NUR1Q12066 484 aa5.47□□□□□ -1.53
PAL1YDR348C RMP1Q12530 201 aa5.47□□□□□ -1.53
PAL1YDR348C RGP1P16664 663 aa5.46□□□□□ -1.54
PAL1YDR348C PAP1P29468 568 aaKnown RBP5.46□□□□□ -1.54
PAL1YDR348C NUP133P36161 1157 aa5.46□□□□□ -1.54
PAL1YDR348C ADE17P38009 592 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms