RNA–Protein interactions for RNA: YDR261C-D

YDR261C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261C-D, Length 4,815 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261C-DYDR261C-D RSA3Q05942 220 aaKnown RBP4.83□□□□□ -1.64
YDR261C-DYDR261C-D YPL272CQ08984 517 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D VPS4P52917 437 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D SOV1Q04748 898 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D UBX5Q06682 500 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D NDE2Q07500 545 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D SGT2Q12118 346 aaKnown RBP4.83□□□□□ -1.64
YDR261C-DYDR261C-D NOT3P06102 836 aaKnown RBP4.83□□□□□ -1.64
YDR261C-DYDR261C-D MRPL25P23369 157 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D RDS1P25611 832 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D BDF1P35817 686 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D RTR1P40084 226 aaPredicted RBP4.83□□□□□ -1.64
YDR261C-DYDR261C-D ADE12P80210 433 aaKnown RBP4.83□□□□□ -1.64
YDR261C-DYDR261C-D SEG1Q04279 960 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D YCS4Q06156 1176 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D NKP2Q06162 153 aa4.83□□□□□ -1.64
YDR261C-DYDR261C-D MRP7P12687 371 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D PMS1P14242 873 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D RET1P22276 1149 aaKnown RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D RAD51P25454 400 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D PIH1P38768 344 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D YIL055CP40523 627 aaKnown RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D VTC2P43585 828 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D MSN5P52918 1224 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D ELA1P53861 379 aaPredicted RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D CWC27Q02770 301 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D APL4Q12028 832 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D FCF2Q12035 217 aaPredicted RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D VPS54Q12071 889 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D RPP0P05317 312 aaKnown RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D TTI1P36097 1038 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D SHE3P38272 425 aaKnown RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D RCK2P38623 610 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D MEH1Q02205 184 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D INA17Q02888 182 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D RTC5Q12108 567 aaKnown RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D TIP41Q12199 356 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D SER3P40054 469 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D RET3P53600 189 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D TMA20P89886 181 aaPredicted RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D SSL2Q00578 843 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D GTR1Q00582 310 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D GYL1Q04322 720 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D SPN1Q06505 410 aaPredicted RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D RKM1Q08961 583 aaPredicted RBP4.82□□□□□ -1.64
YDR261C-DYDR261C-D GNT1Q12096 491 aa4.82□□□□□ -1.64
YDR261C-DYDR261C-D REP1P03871 373 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D RNR2P09938 399 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D MGM1P32266 881 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D KAP104P38217 918 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D APM2P38700 605 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D VHR2P40041 505 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D MKT1P40850 830 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D PAC11P40960 533 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D POL32P47110 350 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D UPF3P48412 387 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D STE20Q03497 939 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D ARP9Q05123 467 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D RRP6Q12149 733 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D SLP1Q12232 587 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D APC2Q12440 853 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D RPN12P32496 274 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D SPT21P35209 758 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D AIM21P40563 679 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D JSN1P47135 1091 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
YDR261C-DYDR261C-D YJR141WP47172 347 aaPredicted RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D COS6P53344 381 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D ALD3P54114 506 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D SWA2Q06677 668 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D YOR352WQ08816 343 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D BBP1Q12365 385 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D DBP10Q12389 995 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D NBL1Q3E7Y6 73 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D YBP1P38315 674 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D LRP1P38801 184 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D FTR1P40088 404 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D CCT7P42943 550 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D MOG1P47123 218 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D GPI8P49018 411 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D YNL058CP53947 316 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D RRN5Q02983 363 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D SNZ1Q03148 297 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D YPR091CQ06833 770 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D MED4Q12343 284 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D MCM10P32354 571 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D STP2P38704 541 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D YNG2P38806 282 aaKnown RBP4.81□□□□□ -1.64
YDR261C-DYDR261C-D PAC10P48363 199 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D NUT1P53114 1132 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D VPS75P53853 264 aa4.81□□□□□ -1.64
YDR261C-DYDR261C-D CDC8P00572 216 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D NAT1P12945 854 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D ATG7P38862 630 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D MND2P40577 368 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D EMP46Q12396 444 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D SPA2P23201 1466 aaKnown RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D PRP28P23394 588 aa4.8□□□□□ -1.64
YDR261C-DYDR261C-D PRP45P28004 379 aaPredicted RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D LOS1P33418 1100 aaPredicted RBP4.8□□□□□ -1.64
YDR261C-DYDR261C-D CSE4P36012 229 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms