RNA–Protein interactions for RNA: YDR201W

SPC19, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC19, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC19	YDR201W	SPB4	P25808	606 aa	Predicted RBP	4.6	□□□□□ -1.67
SPC19	YDR201W	ICL1	P28240	557 aa	Predicted RBP	4.6	□□□□□ -1.67
SPC19	YDR201W	YKU70	P32807	602 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	BMH2	P34730	273 aa	Known RBP	4.6	□□□□□ -1.67
SPC19	YDR201W	MDJ1	P35191	511 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	MYO3	P36006	1272 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	YER156C	P40093	338 aa	Known RBP	4.6	□□□□□ -1.67
SPC19	YDR201W	VID27	P40157	782 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	NSG2	P53898	299 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	HDA1	P53973	706 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	SGD1	Q06132	899 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	GAS5	Q08193	484 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	RAD61	Q99359	647 aa		4.6	□□□□□ -1.67
SPC19	YDR201W	HXK1	P04806	485 aa	Known RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	FLO11	P08640	1367 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	RGP1	P16664	663 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	MAK31	P23059	88 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	SWI4	P25302	1093 aa	Known RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	RPS7A	P26786	190 aa	Known RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	FKS1	P38631	1876 aa	Known RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	NPR3	P38742	1146 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	CSM2	P40465	213 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	ALG2	P43636	503 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	KIN4	Q01919	800 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	ACK1	Q07622	623 aa	Predicted RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	RRG1	Q12167	365 aa	Predicted RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	YOR111W	Q99210	232 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	DDP1	Q99321	188 aa	Known RBP	4.59	□□□□□ -1.67
SPC19	YDR201W	TRS33	Q99394	268 aa		4.59	□□□□□ -1.67
SPC19	YDR201W	TOP1	P04786	769 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	GPA1	P08539	472 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	TAF13	P11747	167 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	RNR3	P21672	869 aa	Known RBP	4.58	□□□□□ -1.68
SPC19	YDR201W	PRO3	P32263	286 aa	Known RBP	4.58	□□□□□ -1.68
SPC19	YDR201W	MIC60	P36112	540 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	MRPL10	P36520	322 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	MAL31	P38156	614 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	RFT1	P38206	574 aa	Predicted RBP	4.58	□□□□□ -1.68
SPC19	YDR201W	RXT2	P38255	430 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	VPS8	P39702	1274 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	YER130C	P39959	443 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	YPT11	P48559	417 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
SPC19	YDR201W	GDE1	Q02979	1223 aa		4.58	□□□□□ -1.68
SPC19	YDR201W	VMS1	Q04311	632 aa	Known RBP	4.58	□□□□□ -1.68
SPC19	YDR201W	KEL3	Q08979	651 aa	Predicted RBP	4.58	□□□□□ -1.68
SPC19	YDR201W	GET3	Q12154	354 aa	Known RBP	4.58	□□□□□ -1.68
SPC19	YDR201W	CDC6	P09119	513 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	ESS1	P22696	170 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	ASF1	P32447	279 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	AFG2	P32794	780 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	YKT6	P36015	200 aa	Known RBP	4.57	□□□□□ -1.68
SPC19	YDR201W	RRM3	P38766	723 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	FAR11	P53917	953 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	NAF1	P53919	492 aa	Known RBP	4.57	□□□□□ -1.68
SPC19	YDR201W	SSL2	Q00578	843 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	RPT6	Q01939	405 aa	Known RBP	4.57	□□□□□ -1.68
SPC19	YDR201W	SEN54	Q02825	467 aa	Predicted RBP	4.57	□□□□□ -1.68
SPC19	YDR201W	MYO5	Q04439	1219 aa	Known RBP	4.57	□□□□□ -1.68
SPC19	YDR201W	DCS2	Q12123	353 aa		4.57	□□□□□ -1.68
SPC19	YDR201W	CDC19	P00549	500 aa	Known RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	CIT1	P00890	479 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	AI1	P03875	834 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	MET6	P05694	767 aa	Known RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	SES1	P07284	462 aa	Known RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	ATE1	P16639	503 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	VPS1	P21576	704 aa	Known RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	URA1	P28272	314 aa	Predicted RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	RPL8B	P29453	256 aa	Known RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	MCM2	P29469	868 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	MKS1	P34072	584 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	RSC30	P38781	883 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	SHC1	P39000	512 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	PCI8	P40512	444 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	CRF1	Q04930	467 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	YDR341C	Q05506	607 aa	Known RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	PCL8	Q08966	492 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	CLF1	Q12309	687 aa	Predicted RBP	4.56	□□□□□ -1.68
SPC19	YDR201W	NBL1	Q3E7Y6	73 aa		4.56	□□□□□ -1.68
SPC19	YDR201W	RPS9B	P05755	195 aa	Known RBP	4.55	□□□□□ -1.68
SPC19	YDR201W	ACE2	P21192	770 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	PRE8	P23639	250 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	YJU3	P28321	313 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	MCM4	P30665	933 aa	Known RBP	4.55	□□□□□ -1.68
SPC19	YDR201W	VTC4	P47075	721 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	YGL138C	P53122	345 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	ATF2	P53296	535 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	NAM8	Q00539	523 aa	Known RBP	4.55	□□□□□ -1.68
SPC19	YDR201W	VPS30	Q02948	557 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	GIS4	Q04233	774 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	DFG5	Q05031	458 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	BDS1	Q08347	646 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	THI72	Q08579	599 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	CEX1	Q12453	761 aa		4.55	□□□□□ -1.68
SPC19	YDR201W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
SPC19	YDR201W	SRM1	P21827	482 aa		4.54	□□□□□ -1.68
SPC19	YDR201W	MSM1	P22438	575 aa		4.54	□□□□□ -1.68
SPC19	YDR201W	GSY2	P27472	705 aa		4.54	□□□□□ -1.68
SPC19	YDR201W	CHS3	P29465	1165 aa		4.54	□□□□□ -1.68
SPC19	YDR201W	SRP40	P32583	406 aa	Predicted RBP	4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 129.5 ms