RNA–Protein interactions for RNA: YDR165W

TRM82, Transcript of Catalytic subunit of a tRNA methyltransferase complex, yeast

Gene TRM82, Length 1,335 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM82	YDR165W	HXT17	P53631	564 aa		5.06	□□□□□ -1.6
TRM82	YDR165W	SNO2	P53823	222 aa		5.06	□□□□□ -1.6
TRM82	YDR165W	HXT15	P54854	567 aa		5.06	□□□□□ -1.6
TRM82	YDR165W	ROD1	Q02805	837 aa		5.06	□□□□□ -1.6
TRM82	YDR165W	MRL1	Q06815	381 aa		5.06	□□□□□ -1.6
TRM82	YDR165W	SYP1	P25623	870 aa	Known RBP	5.05	□□□□□ -1.6
TRM82	YDR165W	RAD27	P26793	382 aa		5.05	□□□□□ -1.6
TRM82	YDR165W	RIM8	P53179	542 aa		5.05	□□□□□ -1.6
TRM82	YDR165W	RTT10	Q08924	1013 aa		5.05	□□□□□ -1.6
TRM82	YDR165W	TMA46	Q12000	345 aa	Known RBP	5.05	□□□□□ -1.6
TRM82	YDR165W	YDL177C	Q12257	170 aa		5.05	□□□□□ -1.6
TRM82	YDR165W	SPO21	Q12411	609 aa		5.05	□□□□□ -1.6
TRM82	YDR165W	GCR1	P07261	785 aa		5.04	□□□□□ -1.6
TRM82	YDR165W	SNF5	P18480	905 aa		5.04	□□□□□ -1.6
TRM82	YDR165W	SEC26	P41810	973 aa	Known RBP	5.04	□□□□□ -1.6
TRM82	YDR165W	CNN1	P43618	361 aa		5.04	□□□□□ -1.6
TRM82	YDR165W	RSB1	Q08417	382 aa		5.04	□□□□□ -1.6
TRM82	YDR165W	SOD2	P00447	233 aa		5.03	□□□□□ -1.6
TRM82	YDR165W	DBP5	P20449	482 aa	Known RBP	5.03	□□□□□ -1.6
TRM82	YDR165W	THI80	P35202	319 aa		5.03	□□□□□ -1.6
TRM82	YDR165W	ETP1	P38748	585 aa	Known RBP	5.03	□□□□□ -1.6
TRM82	YDR165W	FYV10	P40492	516 aa		5.03	□□□□□ -1.6
TRM82	YDR165W	SNU71	P53207	620 aa	Known RBP	5.03	□□□□□ -1.6
TRM82	YDR165W	RAT1	Q02792	1006 aa	Known RBP	5.03	□□□□□ -1.6
TRM82	YDR165W	PEP7	P32609	515 aa		5.02	□□□□□ -1.61
TRM82	YDR165W	GPB2	P39717	880 aa		5.02	□□□□□ -1.61
TRM82	YDR165W	NOP7	P53261	605 aa	Known RBP	5.02	□□□□□ -1.61
TRM82	YDR165W	SPR28	Q04921	423 aa		5.02	□□□□□ -1.61
TRM82	YDR165W	RCL1	Q08096	367 aa	Predicted RBP	5.02	□□□□□ -1.61
TRM82	YDR165W	YOR352W	Q08816	343 aa		5.01	□□□□□ -1.61
TRM82	YDR165W	YCR015C	P25616	317 aa		5	□□□□□ -1.61
TRM82	YDR165W	MNR2	P35724	969 aa		5	□□□□□ -1.61
TRM82	YDR165W	AIM3	P38266	947 aa	Known RBP	5	□□□□□ -1.61
TRM82	YDR165W	ESC8	Q08119	714 aa		5	□□□□□ -1.61
TRM82	YDR165W	MLS1	P30952	554 aa		4.99	□□□□□ -1.61
TRM82	YDR165W	RER2	P35196	286 aa		4.99	□□□□□ -1.61
TRM82	YDR165W	MPH1	P40562	993 aa		4.99	□□□□□ -1.61
TRM82	YDR165W	YER152C	P10356	443 aa		4.98	□□□□□ -1.61
TRM82	YDR165W	NAP1	P25293	417 aa	Known RBP	4.98	□□□□□ -1.61
TRM82	YDR165W	OYE2	Q03558	400 aa	Known RBP	4.98	□□□□□ -1.61
TRM82	YDR165W	RSM24	Q03976	319 aa		4.98	□□□□□ -1.61
TRM82	YDR165W	SGD1	Q06132	899 aa		4.98	□□□□□ -1.61
TRM82	YDR165W	ATG13	Q06628	738 aa		4.98	□□□□□ -1.61
TRM82	YDR165W	YPL277C	Q08989	487 aa		4.98	□□□□□ -1.61
TRM82	YDR165W	GNT1	Q12096	491 aa		4.98	□□□□□ -1.61
TRM82	YDR165W	RPS13	P05756	151 aa	Known RBP	4.97	□□□□□ -1.61
TRM82	YDR165W	RFC5	P38251	354 aa		4.97	□□□□□ -1.61
TRM82	YDR165W	THS1	P04801	734 aa	Known RBP	4.97	□□□□□ -1.61
TRM82	YDR165W	CDC34	P14682	295 aa		4.97	□□□□□ -1.61
TRM82	YDR165W	LYP1	P32487	611 aa		4.97	□□□□□ -1.61
TRM82	YDR165W	PET112	P33893	541 aa		4.97	□□□□□ -1.61
TRM82	YDR165W	LAM1	P38851	1228 aa		4.97	□□□□□ -1.61
TRM82	YDR165W	GEM1	P39722	662 aa		4.97	□□□□□ -1.61
TRM82	YDR165W	TIF35	Q04067	274 aa	Known RBP	4.97	□□□□□ -1.61
TRM82	YDR165W	YLR358C	O13565	187 aa		4.96	□□□□□ -1.62
TRM82	YDR165W	KIN2	P13186	1147 aa	Known RBP	4.96	□□□□□ -1.62
TRM82	YDR165W	YKL222C	P35995	705 aa		4.96	□□□□□ -1.62
TRM82	YDR165W	FLR1	P38124	548 aa		4.96	□□□□□ -1.62
TRM82	YDR165W	MEF2	P39677	819 aa		4.96	□□□□□ -1.62
TRM82	YDR165W	MET10	P39692	1035 aa		4.96	□□□□□ -1.62
TRM82	YDR165W	SNF7	P39929	240 aa	Known RBP	4.96	□□□□□ -1.62
TRM82	YDR165W	YDR132C	Q03900	495 aa		4.96	□□□□□ -1.62
TRM82	YDR165W	DUT1	P33317	147 aa		4.95	□□□□□ -1.62
TRM82	YDR165W	TOD6	P34219	525 aa		4.95	□□□□□ -1.62
TRM82	YDR165W	ABZ1	P37254	787 aa	Predicted RBP	4.95	□□□□□ -1.62
TRM82	YDR165W	KRI1	P42846	591 aa	Known RBP	4.95	□□□□□ -1.62
TRM82	YDR165W	ACM1	Q08981	209 aa		4.95	□□□□□ -1.62
TRM82	YDR165W	SVS1	Q12254	260 aa		4.95	□□□□□ -1.62
TRM82	YDR165W	CYC1	P00044	109 aa	Predicted RBP	4.94	□□□□□ -1.62
TRM82	YDR165W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
TRM82	YDR165W	BAS1	P22035	811 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	DOM34	P33309	386 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	MCM7	P38132	845 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	GIP4	P39732	760 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	RRT14	P40470	206 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	PBP1	P53297	722 aa	Known RBP	4.94	□□□□□ -1.62
TRM82	YDR165W	GCN5	Q03330	439 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	SIZ1	Q04195	904 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	SVF1	Q05515	481 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	RKM4	Q12504	494 aa		4.94	□□□□□ -1.62
TRM82	YDR165W	RPL11A	P0C0W9	174 aa	Known RBP	4.93	□□□□□ -1.62
TRM82	YDR165W	TAF1	P46677	1066 aa		4.93	□□□□□ -1.62
TRM82	YDR165W	TYW3	P53177	273 aa		4.93	□□□□□ -1.62
TRM82	YDR165W	RPL11B	Q3E757	174 aa	Predicted RBP	4.93	□□□□□ -1.62
TRM82	YDR165W	TRP2	P00899	507 aa	Known RBP	4.92	□□□□□ -1.62
TRM82	YDR165W	PNT1	P38969	423 aa		4.92	□□□□□ -1.62
TRM82	YDR165W	CLU1	Q03690	1277 aa	Known RBP	4.92	□□□□□ -1.62
TRM82	YDR165W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
TRM82	YDR165W	SPO20	Q04359	397 aa		4.92	□□□□□ -1.62
TRM82	YDR165W	SPP382	Q06411	708 aa	Predicted RBP	4.92	□□□□□ -1.62
TRM82	YDR165W	CLN2	P20438	545 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	ACE2	P21192	770 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	APL1	P27351	700 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	UGA2	P38067	497 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	YFL054C	P43549	646 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	SPT20	P50875	604 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	YGR053C	P53234	283 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	EEB1	Q02891	456 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	DUS4	Q06063	367 aa		4.91	□□□□□ -1.62
TRM82	YDR165W	INO1	P11986	533 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 205.3 ms