RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C ADD66P36040 267 aa5.46□□□□□ -1.54
SHU2YDR078C VBA5P36172 582 aa5.46□□□□□ -1.54
SHU2YDR078C ARL1P38116 183 aaKnown RBP5.46□□□□□ -1.54
SHU2YDR078C RSP5P39940 809 aaKnown RBP5.46□□□□□ -1.54
SHU2YDR078C SLS1P42900 643 aa5.46□□□□□ -1.54
SHU2YDR078C YGR125WP53273 1036 aa5.46□□□□□ -1.54
SHU2YDR078C OSH2Q12451 1283 aa5.46□□□□□ -1.54
SHU2YDR078C PHO8P11491 566 aa5.45□□□□□ -1.54
SHU2YDR078C SYP1P25623 870 aaKnown RBP5.45□□□□□ -1.54
SHU2YDR078C PBY1P38254 753 aa5.45□□□□□ -1.54
SHU2YDR078C UBP5P39944 805 aa5.45□□□□□ -1.54
SHU2YDR078C MEC3Q02574 474 aa5.45□□□□□ -1.54
SHU2YDR078C RKM2Q03942 479 aa5.45□□□□□ -1.54
SHU2YDR078C TIF35Q04067 274 aaKnown RBP5.45□□□□□ -1.54
SHU2YDR078C YLR125WQ12138 136 aa5.45□□□□□ -1.54
SHU2YDR078C CIT1P00890 479 aa5.44□□□□□ -1.54
SHU2YDR078C GAL11P19659 1081 aa5.44□□□□□ -1.54
SHU2YDR078C HSP60P19882 572 aaKnown RBP5.44□□□□□ -1.54
SHU2YDR078C DBP5P20449 482 aaKnown RBP5.44□□□□□ -1.54
SHU2YDR078C MOT2P34909 587 aaKnown RBP5.44□□□□□ -1.54
SHU2YDR078C GGA2P38817 585 aaKnown RBP5.44□□□□□ -1.54
SHU2YDR078C CNN1P43618 361 aa5.44□□□□□ -1.54
SHU2YDR078C PFD1P46988 109 aa5.44□□□□□ -1.54
SHU2YDR078C GCV1P48015 400 aa5.44□□□□□ -1.54
SHU2YDR078C ERP6P53198 216 aa5.44□□□□□ -1.54
SHU2YDR078C RAT1Q02792 1006 aaKnown RBP5.44□□□□□ -1.54
SHU2YDR078C SPO71Q03868 1245 aa5.44□□□□□ -1.54
SHU2YDR078C POB3Q04636 552 aaKnown RBP5.44□□□□□ -1.54
SHU2YDR078C RKM4Q12504 494 aa5.44□□□□□ -1.54
SHU2YDR078C PIN4P34217 668 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SHU2YDR078C PAN5P38787 379 aa5.43□□□□□ -1.54
SHU2YDR078C SNF7P39929 240 aaKnown RBP5.43□□□□□ -1.54
SHU2YDR078C AFG2P32794 780 aa5.42□□□□□ -1.54
SHU2YDR078C YKL107WP34251 309 aa5.42□□□□□ -1.54
SHU2YDR078C MNN1P39106 762 aa5.42□□□□□ -1.54
SHU2YDR078C POL5P39985 1022 aaKnown RBP5.42□□□□□ -1.54
SHU2YDR078C MPH1P40562 993 aa5.42□□□□□ -1.54
SHU2YDR078C UTP8P53276 713 aaKnown RBP5.42□□□□□ -1.54
SHU2YDR078C EAF1Q06337 982 aa5.42□□□□□ -1.54
SHU2YDR078C YPL066WQ12194 479 aa5.42□□□□□ -1.54
SHU2YDR078C CAN1P04817 590 aa5.41□□□□□ -1.54
SHU2YDR078C PRP9P19736 530 aaKnown RBP5.41□□□□□ -1.54
SHU2YDR078C PUF4P25339 888 aaKnown RBP RIP-Chip data5.41□□□□□ -1.54not detected
SHU2YDR078C ATG14P38270 344 aa5.41□□□□□ -1.54
SHU2YDR078C REI1P38344 393 aaPredicted RBP5.41□□□□□ -1.54
SHU2YDR078C YGL176CP46945 554 aa5.41□□□□□ -1.54
SHU2YDR078C HNT2P49775 206 aa5.41□□□□□ -1.54
SHU2YDR078C UTP14Q04500 899 aaKnown RBP5.41□□□□□ -1.54
SHU2YDR078C ERR1P0CX10 437 aa5.4□□□□□ -1.54
SHU2YDR078C ERR2P0CX11 437 aa5.4□□□□□ -1.54
SHU2YDR078C ARE1P25628 610 aa5.4□□□□□ -1.54
SHU2YDR078C ALG3P38179 458 aa5.4□□□□□ -1.54
SHU2YDR078C RGD1P38339 666 aa5.4□□□□□ -1.54
SHU2YDR078C SDH1Q00711 640 aa5.4□□□□□ -1.54
SHU2YDR078C TAF8Q03750 510 aa5.4□□□□□ -1.54
SHU2YDR078C MSB1P21339 1137 aaKnown RBP5.39□□□□□ -1.55
SHU2YDR078C THI4P32318 326 aa5.39□□□□□ -1.55
SHU2YDR078C SEG2P34250 1132 aa5.39□□□□□ -1.55
SHU2YDR078C LRG1P35688 1017 aa5.39□□□□□ -1.55
SHU2YDR078C MCM7P38132 845 aa5.39□□□□□ -1.55
SHU2YDR078C YAR028WP39548 234 aa5.39□□□□□ -1.55
SHU2YDR078C ALR2P43553 858 aa5.39□□□□□ -1.55
SHU2YDR078C UBX5Q06682 500 aa5.39□□□□□ -1.55
SHU2YDR078C ELG1Q12050 791 aa5.39□□□□□ -1.55
SHU2YDR078C YLL054CQ12244 843 aa5.39□□□□□ -1.55
SHU2YDR078C YGR161W-CQ3E744 92 aa5.39□□□□□ -1.55
SHU2YDR078C MBP1P39678 833 aa5.38□□□□□ -1.55
SHU2YDR078C HUL4P40985 892 aa5.38□□□□□ -1.55
SHU2YDR078C YJR142WP47173 342 aa5.38□□□□□ -1.55
SHU2YDR078C NCE103P53615 221 aa5.38□□□□□ -1.55
SHU2YDR078C YNR063WP53749 607 aa5.38□□□□□ -1.55
SHU2YDR078C LAP2Q10740 671 aa5.38□□□□□ -1.55
SHU2YDR078C GNT1Q12096 491 aa5.38□□□□□ -1.55
SHU2YDR078C PTC5Q12511 572 aa5.38□□□□□ -1.55
SHU2YDR078C ERS1P17261 260 aa5.37□□□□□ -1.55
SHU2YDR078C MLS1P30952 554 aa5.37□□□□□ -1.55
SHU2YDR078C SIP5P40210 489 aaKnown RBP5.37□□□□□ -1.55
SHU2YDR078C VPS53P47061 822 aa5.37□□□□□ -1.55
SHU2YDR078C RTA1P53047 317 aa5.37□□□□□ -1.55
SHU2YDR078C YMR074CQ04773 145 aa5.37□□□□□ -1.55
SHU2YDR078C AVO1Q08236 1176 aa5.37□□□□□ -1.55
SHU2YDR078C ALG6Q12001 544 aaKnown RBP5.37□□□□□ -1.55
SHU2YDR078C HSE1P38753 452 aa5.36□□□□□ -1.55
SHU2YDR078C MSH4P40965 878 aaPredicted RBP5.36□□□□□ -1.55
SHU2YDR078C YGL081WP53156 320 aa5.36□□□□□ -1.55
SHU2YDR078C YDL124WQ07551 312 aaKnown RBP5.36□□□□□ -1.55
SHU2YDR078C TSR4P25040 408 aa5.35□□□□□ -1.55
SHU2YDR078C MSH2P25847 964 aa5.35□□□□□ -1.55
SHU2YDR078C HBS1P32769 611 aaKnown RBP5.35□□□□□ -1.55
SHU2YDR078C MAE1P36013 669 aaKnown RBP5.35□□□□□ -1.55
SHU2YDR078C BET3P36149 193 aa5.35□□□□□ -1.55
SHU2YDR078C YGR045CP53229 120 aa5.35□□□□□ -1.55
SHU2YDR078C YPL260WQ08977 551 aa5.35□□□□□ -1.55
SHU2YDR078C GCD1P09032 578 aaPredicted RBP5.34□□□□□ -1.55
SHU2YDR078C QNS1P38795 714 aaKnown RBP5.34□□□□□ -1.55
SHU2YDR078C CCC2P38995 1004 aa5.34□□□□□ -1.55
SHU2YDR078C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
SHU2YDR078C RSA3Q05942 220 aaKnown RBP5.34□□□□□ -1.55
SHU2YDR078C YOR223WQ12015 292 aa5.34□□□□□ -1.55
SHU2YDR078C NOP14Q99207 810 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms