RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	CAJ1	P39101	391 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	GCD10	P41814	478 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	FYV8	P46949	817 aa	Known RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	SGM1	P47166	707 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	ERP6	P53198	216 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	MCP2	Q06567	569 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
DBF4	YDR052C	DDP1	Q99321	188 aa	Known RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	ADE6	P38972	1358 aa	Known RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	TY1B-BR	Q12193	1756 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	TY1B-GR3	Q12316	1755 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	TY1B-OR	Q92393	1755 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	SBP1	P10080	294 aa	Known RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	SEN2	P16658	377 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	SEC21	P32074	935 aa	Known RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	SRP40	P32583	406 aa	Predicted RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	OCT1	P35999	772 aa		5.63	□□□□□ -1.51
DBF4	YDR052C	SMD2	Q06217	110 aa	Known RBP	5.63	□□□□□ -1.51
DBF4	YDR052C	SIR4	P11978	1358 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	RPO41	P13433	1351 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	RPO21	P04050	1733 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	RPL19A	P0CX82	189 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	RPL19B	P0CX83	189 aa	Predicted RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	MRPL25	P23369	157 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.62	□□□□□ -1.51	not detected
DBF4	YDR052C	ITR2	P30606	609 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	PEX5	P35056	612 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	YKL222C	P35995	705 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	RRM3	P38766	723 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	SET1	P38827	1080 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	YER130C	P39959	443 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	DML1	Q03652	475 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	PMT7	Q06644	662 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	YOL036W	Q08206	761 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	YMR085W	P0CF18	432 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	KGD2	P19262	463 aa	Predicted RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	RAD53	P22216	821 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	NIP100	P33420	868 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	DBP7	P36120	742 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	SPP381	P38282	291 aa	Predicted RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	YHB1	P39676	399 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	KAP123	P40069	1113 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	FKH1	P40466	484 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	AXL1	P40851	1208 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	ALG2	P43636	503 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	BBC1	P47068	1157 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	OCA1	P50946	238 aa	Predicted RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	SQS1	P53866	767 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	DCS1	Q06151	350 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	CSR1	Q06705	408 aa	Known RBP	5.62	□□□□□ -1.51
DBF4	YDR052C	HSP42	Q12329	375 aa		5.62	□□□□□ -1.51
DBF4	YDR052C	LTE1	P07866	1435 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	ADE2	P21264	571 aa	Known RBP	5.61	□□□□□ -1.51
DBF4	YDR052C	SCJ1	P25303	377 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	YEL043W	P32618	956 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	RPC34	P32910	317 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	YHR020W	P38708	688 aa	Known RBP	5.61	□□□□□ -1.51
DBF4	YDR052C	TY4A-J	P47023	414 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	HFM1	P51979	1187 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	YNL144C	P53907	740 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	MAG2	Q06436	670 aa	Known RBP	5.61	□□□□□ -1.51
DBF4	YDR052C	APC5	Q08683	685 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	CLP1	Q08685	445 aa	Predicted RBP	5.61	□□□□□ -1.51
DBF4	YDR052C	RTT10	Q08924	1013 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	IES3	Q12345	250 aa		5.61	□□□□□ -1.51
DBF4	YDR052C	RIB2	Q12362	591 aa	Known RBP	5.61	□□□□□ -1.51
DBF4	YDR052C	ENO2	P00925	437 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	FUS1	P11710	512 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	MSH2	P25847	964 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	GSY2	P27472	705 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	STE5	P32917	917 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	TRZ1	P36159	838 aa	Predicted RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	PSY4	P38193	441 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	VMA22	P38784	181 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	NOC2	P39744	710 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	HAM1	P47119	197 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	RNR4	P49723	345 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	KEL2	P50090	882 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	ZDS1	P50111	915 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	RTC4	P53850	401 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	BOP3	P53958	396 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	GTR1	Q00582	310 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	MSH5	Q12175	901 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	RIO1	Q12196	484 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	YBL113C	Q7M4S9	792 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-JR2	P47100	1755 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-ER2	Q03619	1755 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-MR1	Q04214	1755 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-MR2	Q04670	1755 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-LR1	Q12088	1755 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-NL1	Q12112	1755 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-GR1	Q12141	1755 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	TY1B-BL	Q12490	1755 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	REP1	P03871	373 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	OSM1	P21375	501 aa	Known RBP	5.6	□□□□□ -1.51
DBF4	YDR052C	RDS1	P25611	832 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	GDA1	P32621	518 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	PEX18	P38855	283 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	CKB1	P43639	278 aa		5.6	□□□□□ -1.51
DBF4	YDR052C	STB2	P46679	850 aa		5.6	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms