RNA–Protein interactions for RNA: YBR095C

RXT2, Transcript of Component of the histone deacetylase Rpd3L complex, yeast

Gene RXT2, Length 1,293 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT2	YBR095C	RSB1	Q08417	382 aa		5.49	□□□□□ -1.53
RXT2	YBR095C	GPB1	Q08886	897 aa		5.49	□□□□□ -1.53
RXT2	YBR095C	PMA1	P05030	918 aa	Known RBP	5.48	□□□□□ -1.53
RXT2	YBR095C	RSM24	Q03976	319 aa		5.48	□□□□□ -1.53
RXT2	YBR095C	CDC6	P09119	513 aa		5.47	□□□□□ -1.53
RXT2	YBR095C	SAM37	P50110	327 aa		5.47	□□□□□ -1.53
RXT2	YBR095C	HOS3	Q02959	697 aa	Known RBP	5.47	□□□□□ -1.53
RXT2	YBR095C	GPI13	Q07830	1017 aa		5.47	□□□□□ -1.53
RXT2	YBR095C	GAL10	P04397	699 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	HEM3	P28789	327 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	DCG1	P32460	244 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	ADD66	P36040	267 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	PPX1	P38698	397 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	PHO23	P50947	330 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	PEX13	P80667	386 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	WHI5	Q12416	295 aa		5.46	□□□□□ -1.54
RXT2	YBR095C	DEF1	P35732	738 aa	Known RBP	5.45	□□□□□ -1.54
RXT2	YBR095C	KIP1	P28742	1111 aa		5.44	□□□□□ -1.54
RXT2	YBR095C	CIC1	P38779	376 aa	Known RBP	5.44	□□□□□ -1.54
RXT2	YBR095C	CMP2	P14747	604 aa		5.43	□□□□□ -1.54
RXT2	YBR095C	SRM1	P21827	482 aa		5.43	□□□□□ -1.54
RXT2	YBR095C	RPN3	P40016	523 aa	Known RBP	5.43	□□□□□ -1.54
RXT2	YBR095C	VPS62	P53285	467 aa		5.43	□□□□□ -1.54
RXT2	YBR095C	PPM2	Q08282	695 aa		5.43	□□□□□ -1.54
RXT2	YBR095C	SNF5	P18480	905 aa		5.42	□□□□□ -1.54
RXT2	YBR095C	MET4	P32389	672 aa		5.42	□□□□□ -1.54
RXT2	YBR095C	RDH54	P38086	958 aa		5.42	□□□□□ -1.54
RXT2	YBR095C	RFC5	P38251	354 aa		5.42	□□□□□ -1.54
RXT2	YBR095C	KIN4	Q01919	800 aa		5.42	□□□□□ -1.54
RXT2	YBR095C	OAR1	P35731	278 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	MSS4	P38994	779 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	SNM1	P40993	198 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	POL32	P47110	350 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	RSM26	P47141	266 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	YLR224W	Q05947	369 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	SPO21	Q12411	609 aa		5.41	□□□□□ -1.54
RXT2	YBR095C	PHO4	P07270	312 aa	Known RBP	5.39	□□□□□ -1.55
RXT2	YBR095C	KIN2	P13186	1147 aa	Known RBP	5.39	□□□□□ -1.55
RXT2	YBR095C	GCD6	P32501	712 aa	Known RBP	5.39	□□□□□ -1.55
RXT2	YBR095C	SQT1	P35184	431 aa		5.39	□□□□□ -1.55
RXT2	YBR095C	YAP6	Q03935	383 aa		5.39	□□□□□ -1.55
RXT2	YBR095C	KAR2	P16474	682 aa	Known RBP	5.38	□□□□□ -1.55
RXT2	YBR095C	RPT1	P33299	467 aa	Known RBP	5.38	□□□□□ -1.55
RXT2	YBR095C	MGE1	P38523	228 aa		5.38	□□□□□ -1.55
RXT2	YBR095C	PEX28	P38848	579 aa		5.38	□□□□□ -1.55
RXT2	YBR095C	DAK2	P43550	591 aa		5.38	□□□□□ -1.55
RXT2	YBR095C	NOP12	Q08208	459 aa	Known RBP	5.38	□□□□□ -1.55
RXT2	YBR095C	ATE1	P16639	503 aa		5.37	□□□□□ -1.55
RXT2	YBR095C	VPS35	P34110	944 aa		5.37	□□□□□ -1.55
RXT2	YBR095C	MOH1	P38191	138 aa		5.37	□□□□□ -1.55
RXT2	YBR095C	GPB2	P39717	880 aa		5.37	□□□□□ -1.55
RXT2	YBR095C	OXR1	Q08952	273 aa		5.37	□□□□□ -1.55
RXT2	YBR095C	YPL260W	Q08977	551 aa		5.37	□□□□□ -1.55
RXT2	YBR095C	AFG2	P32794	780 aa		5.36	□□□□□ -1.55
RXT2	YBR095C	PRP40	P33203	583 aa	Known RBP	5.36	□□□□□ -1.55
RXT2	YBR095C	SIZ1	Q04195	904 aa		5.36	□□□□□ -1.55
RXT2	YBR095C	HMI1	Q12039	706 aa		5.36	□□□□□ -1.55
RXT2	YBR095C	RIB2	Q12362	591 aa	Known RBP	5.36	□□□□□ -1.55
RXT2	YBR095C	PTC5	Q12511	572 aa		5.36	□□□□□ -1.55
RXT2	YBR095C	ASF1	P32447	279 aa		5.35	□□□□□ -1.55
RXT2	YBR095C	IOC3	P43596	787 aa		5.35	□□□□□ -1.55
RXT2	YBR095C	ULP1	Q02724	621 aa		5.35	□□□□□ -1.55
RXT2	YBR095C	EST2	Q06163	884 aa		5.35	□□□□□ -1.55
RXT2	YBR095C	UBA2	P52488	636 aa		5.34	□□□□□ -1.55
RXT2	YBR095C	DAL4	Q04895	635 aa		5.34	□□□□□ -1.55
RXT2	YBR095C	BDF2	Q07442	638 aa		5.34	□□□□□ -1.55
RXT2	YBR095C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.34	□□□□□ -1.55	not detected
RXT2	YBR095C	EMC1	P25574	760 aa		5.33	□□□□□ -1.56
RXT2	YBR095C	YGL140C	P53120	1219 aa		5.33	□□□□□ -1.56
RXT2	YBR095C	SEC8	P32855	1065 aa		5.32	□□□□□ -1.56
RXT2	YBR095C	GTF1	P53260	183 aa	Predicted RBP	5.32	□□□□□ -1.56
RXT2	YBR095C	UGA4	P32837	571 aa		5.31	□□□□□ -1.56
RXT2	YBR095C	ALG3	P38179	458 aa		5.31	□□□□□ -1.56
RXT2	YBR095C	ATF1	P40353	525 aa		5.31	□□□□□ -1.56
RXT2	YBR095C	OYE2	Q03558	400 aa	Known RBP	5.31	□□□□□ -1.56
RXT2	YBR095C	RRP15	Q06511	250 aa	Predicted RBP	5.31	□□□□□ -1.56
RXT2	YBR095C	HEM13	P11353	328 aa	Known RBP	5.3	□□□□□ -1.56
RXT2	YBR095C	SEC23	P15303	768 aa	Known RBP	5.3	□□□□□ -1.56
RXT2	YBR095C	MCM2	P29469	868 aa		5.3	□□□□□ -1.56
RXT2	YBR095C	TOS4	Q06266	489 aa		5.3	□□□□□ -1.56
RXT2	YBR095C	SVS1	Q12254	260 aa		5.3	□□□□□ -1.56
RXT2	YBR095C	APL1	P27351	700 aa		5.29	□□□□□ -1.56
RXT2	YBR095C	PLB1	P39105	664 aa		5.29	□□□□□ -1.56
RXT2	YBR095C	RPS26A	P39938	119 aa	Known RBP	5.29	□□□□□ -1.56
RXT2	YBR095C	RPS26B	P39939	119 aa	Known RBP	5.29	□□□□□ -1.56
RXT2	YBR095C	AIM39	Q08223	395 aa		5.29	□□□□□ -1.56
RXT2	YBR095C	PEP7	P32609	515 aa		5.28	□□□□□ -1.56
RXT2	YBR095C	FAA3	P39002	694 aa		5.28	□□□□□ -1.56
RXT2	YBR095C	SIP5	P40210	489 aa	Known RBP	5.28	□□□□□ -1.56
RXT2	YBR095C	YJR107W	P47145	328 aa		5.28	□□□□□ -1.56
RXT2	YBR095C	SPR28	Q04921	423 aa		5.28	□□□□□ -1.56
RXT2	YBR095C	ATG13	Q06628	738 aa		5.28	□□□□□ -1.56
RXT2	YBR095C	MSC2	Q03455	724 aa		5.27	□□□□□ -1.57
RXT2	YBR095C	TAF13	P11747	167 aa		5.26	□□□□□ -1.57
RXT2	YBR095C	HRR25	P29295	494 aa	Known RBP	5.26	□□□□□ -1.57
RXT2	YBR095C	FYV10	P40492	516 aa		5.26	□□□□□ -1.57
RXT2	YBR095C	GCV2	P49095	1034 aa		5.26	□□□□□ -1.57
RXT2	YBR095C	SNU71	P53207	620 aa	Known RBP	5.26	□□□□□ -1.57
RXT2	YBR095C	YGR122W	P53272	402 aa		5.26	□□□□□ -1.57
RXT2	YBR095C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.26	□□□□□ -1.57	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 79.7 ms