RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	NSG2	P53898	299 aa		4.67	□□□□□ -1.66
RPG1	YBR079C	RPT6	Q01939	405 aa	Known RBP	4.67	□□□□□ -1.66
RPG1	YBR079C	MYO5	Q04439	1219 aa	Known RBP	4.67	□□□□□ -1.66
RPG1	YBR079C	TOS4	Q06266	489 aa		4.67	□□□□□ -1.66
RPG1	YBR079C	RMP1	Q12530	201 aa		4.67	□□□□□ -1.66
RPG1	YBR079C	CDC8	P00572	216 aa		4.67	□□□□□ -1.66
RPG1	YBR079C	LCB1	P25045	558 aa	Known RBP	4.67	□□□□□ -1.66
RPG1	YBR079C	NUG1	P40010	520 aa	Known RBP	4.67	□□□□□ -1.66
RPG1	YBR079C	ATG36	P46983	293 aa		4.67	□□□□□ -1.66
RPG1	YBR079C	RAT1	Q02792	1006 aa	Known RBP	4.67	□□□□□ -1.66
RPG1	YBR079C	URH1	Q04179	340 aa		4.67	□□□□□ -1.66
RPG1	YBR079C	THR4	P16120	514 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	ASF1	P32447	279 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	CNS1	P33313	385 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	VPS8	P39702	1274 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	TAD1	P53065	400 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	CWC22	P53333	577 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	SLK19	Q08581	821 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	NUR1	Q12066	484 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	NUC1	P08466	329 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	CKI1	P20485	582 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
RPG1	YBR079C	CDC60	P26637	1090 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	RPL8B	P29453	256 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	UGA2	P38067	497 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	GSM1	P42950	618 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	YFH7	P43591	353 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	YGR153W	P48238	217 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	PIP2	P52960	996 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	HOT1	Q03213	719 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	YDR338C	Q05497	695 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	RIX7	Q07844	837 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	NEW1	Q08972	1196 aa	Known RBP	4.66	□□□□□ -1.66
RPG1	YBR079C	YPL260W	Q08977	551 aa		4.66	□□□□□ -1.66
RPG1	YBR079C	TUP1	P16649	713 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	SET5	P38890	526 aa	Known RBP	4.65	□□□□□ -1.66
RPG1	YBR079C	VTC2	P43585	828 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	CIT3	P43635	486 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	TOS3	P43637	560 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	TRS85	P46944	698 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	SAS4	Q04003	481 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	BDF2	Q07442	638 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	NOP6	Q07623	225 aa	Known RBP	4.65	□□□□□ -1.66
RPG1	YBR079C	RAD61	Q99359	647 aa		4.65	□□□□□ -1.66
RPG1	YBR079C	ARG4	P04076	463 aa	Predicted RBP	4.65	□□□□□ -1.67
RPG1	YBR079C	MAK11	P20484	414 aa	Known RBP	4.65	□□□□□ -1.67
RPG1	YBR079C	NFU1	P32860	256 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	NPL4	P33755	580 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	JNM1	P36224	373 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	GEF1	P37020	779 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	ORC6	P38826	435 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	RSM7	P47150	247 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	CST9	Q06032	482 aa		4.65	□□□□□ -1.67
RPG1	YBR079C	RIM15	P43565	1770 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	RPC53	P25441	422 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	JJJ2	P46997	583 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	DSE4	P53753	1117 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	DIG1	Q03063	452 aa	Known RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	SYF1	Q04048	859 aa	Predicted RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	UTP14	Q04500	899 aa	Known RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	YLH47	Q06493	454 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	SIL1	Q08199	421 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	PRP16	P15938	1071 aa	Predicted RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	SRP54	P20424	541 aa	Known RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	KRE2	P27809	442 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	SEC8	P32855	1065 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	SMC1	P32908	1225 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	NIP100	P33420	868 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	LAS1	P36146	502 aa	Predicted RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	PPS1	P38148	807 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	SMC2	P38989	1170 aa	Known RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	ATG32	P40458	529 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	MMM1	P41800	426 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	YFL034W	P43564	1073 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	ASE1	P50275	885 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	STE23	Q06010	1027 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	CSR1	Q06705	408 aa	Known RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	OPY2	Q06810	360 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	ZRT2	Q12436	422 aa		4.64	□□□□□ -1.67
RPG1	YBR079C	FAS2	P19097	1887 aa	Known RBP	4.64	□□□□□ -1.67
RPG1	YBR079C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
RPG1	YBR079C	MIP1	P15801	1254 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	RAM2	P29703	316 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	SWH1	P35845	1188 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	ISW1	P38144	1129 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	CCT2	P39076	527 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	NPR2	P39923	615 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	YGR273C	P53329	174 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	BNI5	P53890	448 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	CBK1	P53894	756 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	VTC3	Q02725	835 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	VTI1	Q04338	217 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	AIM33	Q04516	312 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	POB3	Q04636	552 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	DSE3	Q08729	430 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	APL5	Q08951	932 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	SNF3	P10870	884 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	SAS3	P34218	831 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	OLA1	P38219	394 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	MAD1	P40957	749 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms