RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	RAD27	P26793	382 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	ALG3	P38179	458 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	QNS1	P38795	714 aa	Known RBP	6.31	□□□□□ -1.4
ECM1	YAL059W	MAD1	P40957	749 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	VPS53	P47061	822 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	YGL081W	P53156	320 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	ECM16	Q04217	1267 aa	Known RBP	6.31	□□□□□ -1.4
ECM1	YAL059W	YDL121C	Q07541	149 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	MED7	Q08278	222 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	HRK1	Q08732	759 aa	Known RBP	6.31	□□□□□ -1.4
ECM1	YAL059W	PTC5	Q12511	572 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	YGR161W-C	Q3E744	92 aa		6.31	□□□□□ -1.4
ECM1	YAL059W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.3	□□□□□ -1.4	not detected
ECM1	YAL059W	CLN2	P20438	545 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	GRX7	P38068	203 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	AIM21	P40563	679 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	KRI1	P42846	591 aa	Known RBP	6.3	□□□□□ -1.4
ECM1	YAL059W	RCM1	P53972	490 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	ALO1	P54783	526 aa	Known RBP	6.3	□□□□□ -1.4
ECM1	YAL059W	VPS16	Q03308	798 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	RPN4	Q03465	531 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	YOR059C	Q08448	450 aa	Known RBP	6.3	□□□□□ -1.4
ECM1	YAL059W	WRS1	Q12109	432 aa	Known RBP	6.3	□□□□□ -1.4
ECM1	YAL059W	YOR131C	Q12486	218 aa		6.3	□□□□□ -1.4
ECM1	YAL059W	CYC7	P00045	113 aa		6.29	□□□□□ -1.4
ECM1	YAL059W	RPA135	P22138	1203 aa	Known RBP	6.29	□□□□□ -1.4
ECM1	YAL059W	RER2	P35196	286 aa		6.29	□□□□□ -1.4
ECM1	YAL059W	YJL049W	P47048	450 aa		6.29	□□□□□ -1.4
ECM1	YAL059W	YJL045W	P47052	634 aa		6.29	□□□□□ -1.4
ECM1	YAL059W	EEB1	Q02891	456 aa		6.29	□□□□□ -1.4
ECM1	YAL059W	BRE1	Q07457	700 aa	Known RBP	6.29	□□□□□ -1.4
ECM1	YAL059W	CDC53	Q12018	815 aa	Known RBP	6.29	□□□□□ -1.4
ECM1	YAL059W	PIN2	Q12057	282 aa		6.29	□□□□□ -1.4
ECM1	YAL059W	GCD1	P09032	578 aa	Predicted RBP	6.28	□□□□□ -1.4
ECM1	YAL059W	SYP1	P25623	870 aa	Known RBP	6.28	□□□□□ -1.4
ECM1	YAL059W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
ECM1	YAL059W	TOS1	P38288	455 aa		6.28	□□□□□ -1.4
ECM1	YAL059W	MNN1	P39106	762 aa		6.28	□□□□□ -1.4
ECM1	YAL059W	ERP2	P39704	215 aa		6.28	□□□□□ -1.4
ECM1	YAL059W	OYE3	P41816	400 aa	Predicted RBP	6.28	□□□□□ -1.4
ECM1	YAL059W	TMA64	Q04600	565 aa	Known RBP	6.28	□□□□□ -1.4
ECM1	YAL059W	TMA46	Q12000	345 aa	Known RBP	6.28	□□□□□ -1.4
ECM1	YAL059W	YVC1	Q12324	675 aa		6.28	□□□□□ -1.4
ECM1	YAL059W	KAR1	P11927	433 aa		6.27	□□□□□ -1.41
ECM1	YAL059W	DBP5	P20449	482 aa	Known RBP	6.27	□□□□□ -1.41
ECM1	YAL059W	CNN1	P43618	361 aa		6.27	□□□□□ -1.41
ECM1	YAL059W	FAA4	P47912	694 aa	Known RBP	6.27	□□□□□ -1.41
ECM1	YAL059W	TRP2	P00899	507 aa	Known RBP	6.26	□□□□□ -1.41
ECM1	YAL059W	KIP1	P28742	1111 aa		6.26	□□□□□ -1.41
ECM1	YAL059W	OMA1	P36163	345 aa		6.26	□□□□□ -1.41
ECM1	YAL059W	GPB2	P39717	880 aa		6.26	□□□□□ -1.41
ECM1	YAL059W	YJR142W	P47173	342 aa		6.26	□□□□□ -1.41
ECM1	YAL059W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	not detected
ECM1	YAL059W	AOS1	Q06624	347 aa		6.26	□□□□□ -1.41
ECM1	YAL059W	NSI1	Q12457	570 aa		6.26	□□□□□ -1.41
ECM1	YAL059W	LYP1	P32487	611 aa		6.25	□□□□□ -1.41
ECM1	YAL059W	BUD6	P41697	788 aa		6.25	□□□□□ -1.41
ECM1	YAL059W	SDH1	Q00711	640 aa		6.25	□□□□□ -1.41
ECM1	YAL059W	GDE1	Q02979	1223 aa		6.25	□□□□□ -1.41
ECM1	YAL059W	TIF35	Q04067	274 aa	Known RBP	6.25	□□□□□ -1.41
ECM1	YAL059W	SSF2	Q12153	453 aa	Predicted RBP	6.25	□□□□□ -1.41
ECM1	YAL059W	MET6	P05694	767 aa	Known RBP	6.24	□□□□□ -1.41
ECM1	YAL059W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
ECM1	YAL059W	TOA1	P32773	286 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	RGD1	P38339	666 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	YHL012W	P38709	493 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	RPT2	P40327	437 aa	Known RBP	6.24	□□□□□ -1.41
ECM1	YAL059W	INP52	P50942	1183 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	CWC24	P53769	259 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	TRE1	Q08919	783 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	YPL260W	Q08977	551 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	SPO21	Q12411	609 aa		6.24	□□□□□ -1.41
ECM1	YAL059W	MLS1	P30952	554 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	SEC6	P32844	805 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	LIP5	P32875	414 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	MAC1	P35192	417 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	MCM7	P38132	845 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	MPH1	P40562	993 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	YGR053C	P53234	283 aa		6.23	□□□□□ -1.41
ECM1	YAL059W	CEF1	Q03654	590 aa	Predicted RBP	6.23	□□□□□ -1.41
ECM1	YAL059W	UTP14	Q04500	899 aa	Known RBP	6.23	□□□□□ -1.41
ECM1	YAL059W	SAM35	P14693	329 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	RIP-Chip
ECM1	YAL059W	MOT2	P34909	587 aa	Known RBP	6.22	□□□□□ -1.41
ECM1	YAL059W	MPE1	P35728	441 aa	Known RBP	6.22	□□□□□ -1.41
ECM1	YAL059W	SEA4	P38164	1038 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	PEX7	P39108	375 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	UBP12	P39538	1254 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	NOC2	P39744	710 aa	Known RBP	6.22	□□□□□ -1.41
ECM1	YAL059W	YEN1	P40028	759 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	HNT2	P49775	206 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	TYW3	P53177	273 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	DNM1	P54861	757 aa		6.22	□□□□□ -1.41
ECM1	YAL059W	GIR2	Q03768	265 aa	Predicted RBP	6.22	□□□□□ -1.41
ECM1	YAL059W	INO1	P11986	533 aa		6.21	□□□□□ -1.42
ECM1	YAL059W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	6.21	□□□□□ -1.42	RIP-Chip
ECM1	YAL059W	PRO1	P32264	428 aa		6.21	□□□□□ -1.42
ECM1	YAL059W	YSC84	P32793	468 aa		6.21	□□□□□ -1.42
ECM1	YAL059W	CTH1	P47976	325 aa		6.21	□□□□□ -1.42
ECM1	YAL059W	BDF2	Q07442	638 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 95.9 ms