RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
SCARB2-221ENST00000640341 MPNDQ8N594 471 aa17.81■□□□□ 0.44
SCARB2-221ENST00000640341 PHAXQ9H814 394 aaKnown RBP17.81■□□□□ 0.44
SCARB2-221ENST00000640341 CCDC30Q5VVM6 783 aa17.81■□□□□ 0.44
SCARB2-221ENST00000640341 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
SCARB2-221ENST00000640341 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
SCARB2-221ENST00000640341 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
SCARB2-221ENST00000640341 GPT2Q8TD30 523 aa17.8■□□□□ 0.44
SCARB2-221ENST00000640341 RBSNQ9H1K0 784 aa17.8■□□□□ 0.44
SCARB2-221ENST00000640341 TNRQ92752 1358 aa17.8■□□□□ 0.44
SCARB2-221ENST00000640341 MCCP23508 829 aa17.8■□□□□ 0.44
SCARB2-221ENST00000640341 UBTFL1P0CB47 393 aaPredicted RBP17.79■□□□□ 0.44
SCARB2-221ENST00000640341 CCDC173Q0VFZ6 552 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 ESYT1Q9BSJ8 1104 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 KIAA0232Q92628 1395 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 CWC22Q9HCG8 908 aaKnown RBP17.79■□□□□ 0.44
SCARB2-221ENST00000640341 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 ABTB2Q8N961 1025 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 EID1Q9Y6B2 187 aa17.79■□□□□ 0.44
SCARB2-221ENST00000640341 KIF24Q5T7B8 1368 aa17.78■□□□□ 0.44
SCARB2-221ENST00000640341 GNAI3P08754 354 aa17.78■□□□□ 0.44
SCARB2-221ENST00000640341 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
SCARB2-221ENST00000640341 CRB1P82279 1406 aa17.77■□□□□ 0.44
SCARB2-221ENST00000640341 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.44
SCARB2-221ENST00000640341 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.44
SCARB2-221ENST00000640341 PLEKHG3A1L390 1219 aa17.77■□□□□ 0.43
SCARB2-221ENST00000640341 USP6P35125 1406 aa17.77■□□□□ 0.43
SCARB2-221ENST00000640341 TMEM63CQ9P1W3 806 aa17.76■□□□□ 0.43
SCARB2-221ENST00000640341 IL25Q9H293 177 aa17.76■□□□□ 0.43
SCARB2-221ENST00000640341 CHMLP26374 656 aa17.76■□□□□ 0.43
SCARB2-221ENST00000640341 IL17REQ8NFR9 667 aa17.76■□□□□ 0.43
SCARB2-221ENST00000640341 DDX54Q8TDD1 881 aaKnown RBP17.75■□□□□ 0.43
SCARB2-221ENST00000640341 SRGAP3O43295 1099 aa17.75■□□□□ 0.43
SCARB2-221ENST00000640341 CYP2E1P05181 493 aaPredicted RBP17.75■□□□□ 0.43
SCARB2-221ENST00000640341 LMOD2Q6P5Q4 547 aa17.75■□□□□ 0.43
SCARB2-221ENST00000640341 RIMBP3CA6NJZ7 1639 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 RIMBP3BA6NNM3 1639 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 RIMBP3Q9UFD9 1639 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 FLT4P35916 1363 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 ATP8B2P98198 1209 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 HSP90AA2PQ14568 343 aaPredicted RBP17.74■□□□□ 0.43
SCARB2-221ENST00000640341 PPP1R42Q7Z4L9 355 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
SCARB2-221ENST00000640341 KIAA1211Q6ZU35 1233 aa17.73■□□□□ 0.43
SCARB2-221ENST00000640341 ZSCAN30Q86W11 494 aa17.73■□□□□ 0.43
SCARB2-221ENST00000640341 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
SCARB2-221ENST00000640341 ARID3AQ99856 593 aa17.73■□□□□ 0.43
SCARB2-221ENST00000640341 CPA1P15085 419 aa17.72■□□□□ 0.43
SCARB2-221ENST00000640341 SPG7Q9UQ90 795 aa17.72■□□□□ 0.43
SCARB2-221ENST00000640341 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
SCARB2-221ENST00000640341 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
SCARB2-221ENST00000640341 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
SCARB2-221ENST00000640341 PLCB2Q00722 1185 aa17.72■□□□□ 0.43
SCARB2-221ENST00000640341 XPCQ01831 940 aaPredicted RBP17.72■□□□□ 0.43
SCARB2-221ENST00000640341 NBPF7P0C2Y1 421 aaPredicted RBP17.72■□□□□ 0.43
SCARB2-221ENST00000640341 CLEC17AQ6ZS10 378 aa17.72■□□□□ 0.43
SCARB2-221ENST00000640341 SPATA31D1Q6ZQQ2 1576 aa17.71■□□□□ 0.43
SCARB2-221ENST00000640341 TAF7Q15545 349 aaPredicted RBP17.71■□□□□ 0.43
SCARB2-221ENST00000640341 UBE2Q2Q8WVN8 375 aa17.71■□□□□ 0.43
SCARB2-221ENST00000640341 HOXC9P31274 260 aa17.71■□□□□ 0.43
SCARB2-221ENST00000640341 ZNF445P59923 1031 aa17.71■□□□□ 0.43
SCARB2-221ENST00000640341 SIRT1Q96EB6 747 aa17.71■□□□□ 0.43
SCARB2-221ENST00000640341 OSBPL3Q9H4L5 887 aa17.71■□□□□ 0.43
SCARB2-221ENST00000640341 LGR6Q9HBX8 967 aa17.7■□□□□ 0.42
SCARB2-221ENST00000640341 RIMS1Q86UR5 1692 aaKnown RBP17.7■□□□□ 0.42
SCARB2-221ENST00000640341 PI4KAP2A4QPH2 592 aa17.7■□□□□ 0.42
SCARB2-221ENST00000640341 KCNQ3O43525 872 aa17.7■□□□□ 0.42
SCARB2-221ENST00000640341 PI4KAP1Q8N8J0 262 aa17.7■□□□□ 0.42
SCARB2-221ENST00000640341 SRCIN1Q9C0H9 1055 aa17.7■□□□□ 0.42
SCARB2-221ENST00000640341 R3HCC1Q9Y3T6 440 aaKnown RBP17.7■□□□□ 0.42
SCARB2-221ENST00000640341 SBNO1A3KN83 1393 aa17.69■□□□□ 0.42
SCARB2-221ENST00000640341 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
SCARB2-221ENST00000640341 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
SCARB2-221ENST00000640341 IGSF1Q8N6C5 1336 aa17.69■□□□□ 0.42
SCARB2-221ENST00000640341 NRXN3Q9Y4C0 1643 aa17.69■□□□□ 0.42
SCARB2-221ENST00000640341 PPP1R9BQ96SB3 815 aa17.69■□□□□ 0.42
SCARB2-221ENST00000640341 ARHGEF10O15013 1369 aa17.68■□□□□ 0.42
SCARB2-221ENST00000640341 ADAMTS13Q76LX8 1427 aa17.68■□□□□ 0.42
SCARB2-221ENST00000640341 RBM10P98175 930 aaKnown RBP17.68■□□□□ 0.42
SCARB2-221ENST00000640341 MPRIPQ6WCQ1 1025 aa17.68■□□□□ 0.42
SCARB2-221ENST00000640341 RHPN1Q8TCX5 695 aa17.68■□□□□ 0.42
SCARB2-221ENST00000640341 CEP170BQ9Y4F5 1589 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-221ENST00000640341 IBTKQ9P2D0 1353 aaPredicted RBP17.67■□□□□ 0.42
SCARB2-221ENST00000640341 KCNA6P17658 529 aa17.67■□□□□ 0.42
SCARB2-221ENST00000640341 LRSAM1Q6UWE0 723 aa17.66■□□□□ 0.42
SCARB2-221ENST00000640341 LRRC59Q96AG4 307 aaKnown RBP17.66■□□□□ 0.42
SCARB2-221ENST00000640341 TTC21AQ8NDW8 1320 aa17.66■□□□□ 0.42
SCARB2-221ENST00000640341 TEFQ10587 303 aa17.66■□□□□ 0.42
SCARB2-221ENST00000640341 BRD1O95696 1058 aa17.66■□□□□ 0.42
SCARB2-221ENST00000640341 SOS1Q07889 1333 aaPredicted RBP17.66■□□□□ 0.42
SCARB2-221ENST00000640341 PTPRUQ92729 1446 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 MCM2P49736 904 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
SCARB2-221ENST00000640341 CHMP3Q9Y3E7 222 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 FIBPO43427 364 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 PA2G4Q9UQ80 394 aaKnown RBP17.65■□□□□ 0.42
SCARB2-221ENST00000640341 C3P01024 1663 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 TECPR2O15040 1411 aa17.65■□□□□ 0.42
SCARB2-221ENST00000640341 SETD1AO15047 1707 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms