RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 ALDH1B1P30837 517 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 CYP4F22Q6NT55 531 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 SIRT1Q96EB6 747 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 TTC21AQ8NDW8 1320 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 PCDH11XQ9BZA7 1347 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 PCDH11YQ9BZA8 1340 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 MAP3K5Q99683 1374 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 HSPA8P11142 646 aaKnown RBP5.86□□□□□ -1.47
GABRA1-220ENST00000638159 OGFOD1Q8N543 542 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 TRIM17Q9Y577 477 aa5.86□□□□□ -1.47
GABRA1-220ENST00000638159 ZC3H13Q5T200 1668 aaKnown RBP5.86□□□□□ -1.47
GABRA1-220ENST00000638159 INO80Q9ULG1 1556 aaPredicted RBP5.86□□□□□ -1.47
GABRA1-220ENST00000638159 CENPJQ9HC77 1338 aaPredicted RBP5.86□□□□□ -1.47
GABRA1-220ENST00000638159 ZEB1P37275 1124 aaPredicted RBP5.85□□□□□ -1.47
GABRA1-220ENST00000638159 ARMC9Q7Z3E5 817 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 NKX2-3Q8TAU0 364 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 ERO1AQ96HE7 468 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 CDC37L1Q7L3B6 337 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 ROBO2Q9HCK4 1378 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 C21orf2O43822 256 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 HABP4Q5JVS0 413 aaKnown RBP5.85□□□□□ -1.47
GABRA1-220ENST00000638159 CIAPIN1Q6FI81 312 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 IFNL2Q8IZJ0 200 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 RTF1Q92541 710 aaKnown RBP5.85□□□□□ -1.47
GABRA1-220ENST00000638159 CABP1Q9NZU7 370 aa5.85□□□□□ -1.47
GABRA1-220ENST00000638159 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 PPIP5K2O43314 1243 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 FKTNO75072 461 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 SIK1P57059 783 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 NUTM1Q86Y26 1132 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 NHSL1Q5SYE7 1610 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 CANXP27824 592 aaKnown RBP5.84□□□□□ -1.47
GABRA1-220ENST00000638159 CGNL1Q0VF96 1302 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 DISP2A7MBM2 1401 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 MYO1BO43795 1136 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 TPTE2Q6XPS3 522 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 PDGFDQ9GZP0 370 aaPredicted RBP5.84□□□□□ -1.47
GABRA1-220ENST00000638159 EFCC1Q9HA90 598 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 IQGAP3Q86VI3 1631 aa5.84□□□□□ -1.47
GABRA1-220ENST00000638159 ZNF827Q17R98 1081 aa5.84□□□□□ -1.48
GABRA1-220ENST00000638159 WBP1LQ9NX94 342 aa5.84□□□□□ -1.48
GABRA1-220ENST00000638159 ADGRB3O60242 1522 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 SLC9C1Q4G0N8 1177 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 TMOD2Q9NZR1 351 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 POLR3AO14802 1390 aaPredicted RBP5.83□□□□□ -1.48
GABRA1-220ENST00000638159 PPEF1O14829 653 aaPredicted RBP5.83□□□□□ -1.48
GABRA1-220ENST00000638159 EIF5P55010 431 aaKnown RBP5.83□□□□□ -1.48
GABRA1-220ENST00000638159 PALLDQ8WX93 1383 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 ABCC11Q96J66 1382 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 MYOM2P54296 1465 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 SLIT2O94813 1529 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 ST20-MTHFSA0A0A6YYL1 179 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 DDNO94850 711 aaPredicted RBP5.83□□□□□ -1.48
GABRA1-220ENST00000638159 KCNJ4P48050 445 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 MTHFSP49914 203 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 TEX13AQ9BXU3 409 aaPredicted RBP5.83□□□□□ -1.48
GABRA1-220ENST00000638159 PTPN23Q9H3S7 1636 aa5.83□□□□□ -1.48
GABRA1-220ENST00000638159 CFAP65Q6ZU64 1925 aaKnown RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 PNPLA7Q6ZV29 1317 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 C6orf229H3BNL8 230 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 FMNL1O95466 1100 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 MYCNP04198 464 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 RFX1P22670 979 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 GRIPAP1Q4V328 841 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 ZNF530Q6P9A1 599 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 ZNF142P52746 1687 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 RASSF7Q02833 373 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 CNGB1Q14028 1251 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 KRT26Q7Z3Y9 468 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 EYA3Q99504 573 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 PPP1R12BO60237 982 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 EVI5O60447 810 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 SERPINB2P05120 415 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 CHRNA5P30532 468 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 KIF6Q6ZMV9 814 aa5.82□□□□□ -1.48
GABRA1-220ENST00000638159 GBA2Q9HCG7 927 aaPredicted RBP5.82□□□□□ -1.48
GABRA1-220ENST00000638159 APBB1O00213 710 aa5.81□□□□□ -1.48
GABRA1-220ENST00000638159 DIP2AQ14689 1571 aa5.81□□□□□ -1.48
GABRA1-220ENST00000638159 FRAT2O75474 233 aaPredicted RBP5.81□□□□□ -1.48
GABRA1-220ENST00000638159 MPNDQ8N594 471 aa5.81□□□□□ -1.48
GABRA1-220ENST00000638159 FBXO46Q6PJ61 603 aaPredicted RBP5.81□□□□□ -1.48
GABRA1-220ENST00000638159 RAET1EQ8TD07 263 aa5.81□□□□□ -1.48
GABRA1-220ENST00000638159 PIK3C2BO00750 1634 aa5.81□□□□□ -1.48
GABRA1-220ENST00000638159 CCDC174Q6PII3 467 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 CRBNQ96SW2 442 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 COL16A1Q07092 1604 aaPredicted RBP5.8□□□□□ -1.48
GABRA1-220ENST00000638159 CNTNAP1P78357 1384 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 KTN1Q86UP2 1357 aaKnown RBP5.8□□□□□ -1.48
GABRA1-220ENST00000638159 LRP5O75197 1615 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 RGMBQ6NW40 437 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 ZNF710Q8N1W2 664 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 SLC10A4Q96EP9 437 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 RBM5P52756 815 aaKnown RBP eCLIP5.8□□□□□ -1.48
GABRA1-220ENST00000638159 CHRDL2Q6WN34 429 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 ANKARQ7Z5J8 1434 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 MBD5Q9P267 1494 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 IRS2Q9Y4H2 1338 aa5.8□□□□□ -1.48
GABRA1-220ENST00000638159 ADAMTS13Q76LX8 1427 aa5.79□□□□□ -1.48
GABRA1-220ENST00000638159 SYNE4Q8N205 404 aa5.79□□□□□ -1.48
GABRA1-220ENST00000638159 MTIF3Q9H2K0 278 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms