RNA–Protein interactions for RNA: ENST00000634620.1

ATP7B-213, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-213ENST00000634620 RABEP1Q15276 862 aa12.98□□□□□ -0.33
ATP7B-213ENST00000634620 HOOK1Q9UJC3 728 aaKnown RBP12.98□□□□□ -0.33
ATP7B-213ENST00000634620 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
ATP7B-213ENST00000634620 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
ATP7B-213ENST00000634620 TMEM94Q12767 1356 aa12.98□□□□□ -0.33
ATP7B-213ENST00000634620 ALDH1L2Q3SY69 923 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 CPLX2Q6PUV4 134 aaKnown RBP12.97□□□□□ -0.33
ATP7B-213ENST00000634620 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
ATP7B-213ENST00000634620 TRIM29Q14134 588 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
ATP7B-213ENST00000634620 RIMBP3CA6NJZ7 1639 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 RIMBP3BA6NNM3 1639 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 RIMBP3Q9UFD9 1639 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 PSDA5PKW4 1024 aaPredicted RBP12.97□□□□□ -0.33
ATP7B-213ENST00000634620 CAVIN1Q6NZI2 390 aaKnown RBP12.97□□□□□ -0.33
ATP7B-213ENST00000634620 CCDC73Q6ZRK6 1079 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 CNTROBQ8N137 903 aa12.97□□□□□ -0.33
ATP7B-213ENST00000634620 RRP9O43818 475 aaKnown RBP12.96□□□□□ -0.33
ATP7B-213ENST00000634620 IKQ13123 557 aaPredicted RBP12.96□□□□□ -0.33
ATP7B-213ENST00000634620 CCDC191Q8NCU4 936 aa12.96□□□□□ -0.33
ATP7B-213ENST00000634620 ATP6V1AP38606 617 aa12.96□□□□□ -0.33
ATP7B-213ENST00000634620 SYNE3Q6ZMZ3 975 aa12.96□□□□□ -0.33
ATP7B-213ENST00000634620 TEX13AQ9BXU3 409 aaPredicted RBP12.96□□□□□ -0.33
ATP7B-213ENST00000634620 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.34
ATP7B-213ENST00000634620 SPATA31A6Q5VVP1 1343 aa12.96□□□□□ -0.34
ATP7B-213ENST00000634620 TRIM37O94972 964 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 IL2RBP14784 551 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
ATP7B-213ENST00000634620 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 MAGI3Q5TCQ9 1506 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
ATP7B-213ENST00000634620 CAPN15O75808 1086 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 ANKRD36BQ8N2N9 1353 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 DHX16O60231 1041 aaKnown RBP12.95□□□□□ -0.34
ATP7B-213ENST00000634620 WDR78Q5VTH9 848 aa12.95□□□□□ -0.34
ATP7B-213ENST00000634620 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
ATP7B-213ENST00000634620 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 CPLX1O14810 134 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 ZCRB1Q8TBF4 217 aaKnown RBP12.94□□□□□ -0.34
ATP7B-213ENST00000634620 MPHOSPH8Q99549 860 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 TSPY26PQ9H489 355 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 SPDYE4A6NLX3 237 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 SSH1Q8WYL5 1049 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 MCM2P49736 904 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 CCDC27Q2M243 656 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 TESK2Q96S53 571 aa12.94□□□□□ -0.34
ATP7B-213ENST00000634620 DCTN1Q14203 1278 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 MBD3O95983 291 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 CLASRPQ8N2M8 674 aaKnown RBP12.93□□□□□ -0.34
ATP7B-213ENST00000634620 TRIM5Q9C035 493 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 NAT10Q9H0A0 1025 aaKnown RBP12.93□□□□□ -0.34
ATP7B-213ENST00000634620 TARBP1Q13395 1621 aaKnown RBP12.93□□□□□ -0.34
ATP7B-213ENST00000634620 LETM1O95202 739 aaPredicted RBP12.93□□□□□ -0.34
ATP7B-213ENST00000634620 KIF22Q14807 665 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 ANKIB1Q9P2G1 1089 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 RPAP2Q8IXW5 612 aaPredicted RBP12.93□□□□□ -0.34
ATP7B-213ENST00000634620 LRRCC1Q9C099 1032 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 NBPF6Q5VWK0 638 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 NBPF5PQ86XG9 351 aaPredicted RBP12.93□□□□□ -0.34
ATP7B-213ENST00000634620 OGFOD1Q8N543 542 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 NBPF4Q96M43 638 aa12.93□□□□□ -0.34
ATP7B-213ENST00000634620 WASLO00401 505 aaPredicted RBP12.92□□□□□ -0.34
ATP7B-213ENST00000634620 ERC1Q8IUD2 1116 aa12.92□□□□□ -0.34
ATP7B-213ENST00000634620 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
ATP7B-213ENST00000634620 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
ATP7B-213ENST00000634620 MAST1Q9Y2H9 1570 aa12.92□□□□□ -0.34
ATP7B-213ENST00000634620 COL17A1Q9UMD9 1497 aaPredicted RBP12.92□□□□□ -0.34
ATP7B-213ENST00000634620 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
ATP7B-213ENST00000634620 UQCRHP07919 91 aa12.92□□□□□ -0.34
ATP7B-213ENST00000634620 PDILTQ8N807 584 aa12.92□□□□□ -0.34
ATP7B-213ENST00000634620 AMOTQ4VCS5 1084 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 NME9Q86XW9 330 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.91□□□□□ -0.34
ATP7B-213ENST00000634620 K7ELQ4 463 aaPredicted RBP12.91□□□□□ -0.34
ATP7B-213ENST00000634620 H0YIN7 160 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 IGHMBP2P38935 993 aaKnown RBP12.91□□□□□ -0.34
ATP7B-213ENST00000634620 FOSBP53539 338 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
ATP7B-213ENST00000634620 PSMA5P28066 241 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 NEK4P51957 841 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 TSPYL1Q9H0U9 437 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 IL16Q14005 1332 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 PRPF40AO75400 957 aaKnown RBP12.9□□□□□ -0.34
ATP7B-213ENST00000634620 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 HIP1O00291 1037 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
ATP7B-213ENST00000634620 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
ATP7B-213ENST00000634620 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
ATP7B-213ENST00000634620 SKAP1Q86WV1 359 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms