RNA–Protein interactions for RNA: ENST00000625905.1

NELFE-214, Transcript of negative elongation factor complex member E, humanhuman

TSL 5 BASIC

Gene NELFE, Length 111 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-214ENST00000625905 LRP5O75197 1615 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 SLC52A2Q9HAB3 445 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 ATG3Q9NT62 314 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 TUBGCP6Q96RT7 1819 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
NELFE-214ENST00000625905 C4BP0C0L5 1744 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
NELFE-214ENST00000625905 ZNF831Q5JPB2 1677 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 LOC102724428A0A0B4J2F2 783 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 SIK1P57059 783 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 SLC15A2Q16348 729 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
NELFE-214ENST00000625905 LGR6Q9HBX8 967 aa12.22□□□□□ -0.45
NELFE-214ENST00000625905 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
NELFE-214ENST00000625905 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.45
NELFE-214ENST00000625905 CEMIPQ8WUJ3 1361 aa12.21□□□□□ -0.45
NELFE-214ENST00000625905 HMGB2P26583 209 aaKnown RBP12.21□□□□□ -0.45
NELFE-214ENST00000625905 TEFQ10587 303 aa12.21□□□□□ -0.45
NELFE-214ENST00000625905 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
NELFE-214ENST00000625905 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
NELFE-214ENST00000625905 COL5A3P25940 1745 aaPredicted RBP12.2□□□□□ -0.46
NELFE-214ENST00000625905 TJP1Q07157 1748 aa12.2□□□□□ -0.46
NELFE-214ENST00000625905 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
NELFE-214ENST00000625905 KCPQ6ZWJ8 1503 aa12.2□□□□□ -0.46
NELFE-214ENST00000625905 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 AK7Q96M32 723 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 TFCP2L1Q9NZI6 479 aa12.19□□□□□ -0.46
NELFE-214ENST00000625905 HTATSF1O43719 755 aaKnown RBP12.18□□□□□ -0.46
NELFE-214ENST00000625905 PTCD1O75127 700 aaKnown RBP12.18□□□□□ -0.46
NELFE-214ENST00000625905 ITPK1Q13572 414 aa12.18□□□□□ -0.46
NELFE-214ENST00000625905 MCM10Q7L590 875 aa12.18□□□□□ -0.46
NELFE-214ENST00000625905 TTC5Q8N0Z6 440 aa12.18□□□□□ -0.46
NELFE-214ENST00000625905 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
NELFE-214ENST00000625905 MRS2Q9HD23 443 aa12.18□□□□□ -0.46
NELFE-214ENST00000625905 SLC39A6Q13433 755 aa12.17□□□□□ -0.46
NELFE-214ENST00000625905 RUNDC1Q96C34 613 aa12.17□□□□□ -0.46
NELFE-214ENST00000625905 ADAMTS8Q9UP79 889 aa12.17□□□□□ -0.46
NELFE-214ENST00000625905 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
NELFE-214ENST00000625905 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
NELFE-214ENST00000625905 LMOD3Q0VAK6 560 aa12.16□□□□□ -0.46
NELFE-214ENST00000625905 DCTN1Q14203 1278 aa12.16□□□□□ -0.46
NELFE-214ENST00000625905 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
NELFE-214ENST00000625905 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
NELFE-214ENST00000625905 CNTNAP4Q9C0A0 1308 aa12.15□□□□□ -0.46
NELFE-214ENST00000625905 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
NELFE-214ENST00000625905 GNPATO15228 680 aa12.15□□□□□ -0.46
NELFE-214ENST00000625905 TMPOP42166 694 aaKnown RBP12.15□□□□□ -0.46
NELFE-214ENST00000625905 SLC4A9Q96Q91 983 aa12.15□□□□□ -0.46
NELFE-214ENST00000625905 MSH5O43196 834 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 PHF14O94880 888 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 ZBTB7AO95365 584 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 RIPK4P57078 832 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
NELFE-214ENST00000625905 SPON1Q9HCB6 807 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 RRP7AQ9Y3A4 280 aaKnown RBP12.14□□□□□ -0.47
NELFE-214ENST00000625905 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
NELFE-214ENST00000625905 MTFR1LQ9H019 292 aa12.13□□□□□ -0.47
NELFE-214ENST00000625905 HEG1Q9ULI3 1381 aa12.13□□□□□ -0.47
NELFE-214ENST00000625905 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.12□□□□□ -0.47
NELFE-214ENST00000625905 SSFA2P28290 1259 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 VSIG10Q8N0Z9 540 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
NELFE-214ENST00000625905 FMNL2Q96PY5 1086 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 LAMB4A4D0S4 1761 aa12.12□□□□□ -0.47
NELFE-214ENST00000625905 CRKLP46109 303 aaKnown RBP12.11□□□□□ -0.47
NELFE-214ENST00000625905 TAF7Q15545 349 aaPredicted RBP12.11□□□□□ -0.47
NELFE-214ENST00000625905 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
NELFE-214ENST00000625905 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
NELFE-214ENST00000625905 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
NELFE-214ENST00000625905 SLC16A10Q8TF71 515 aa12.11□□□□□ -0.47
NELFE-214ENST00000625905 RTCBQ9Y3I0 505 aaKnown RBP12.11□□□□□ -0.47
NELFE-214ENST00000625905 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
NELFE-214ENST00000625905 APAF1O14727 1248 aa12.1□□□□□ -0.47
NELFE-214ENST00000625905 KCNQ3O43525 872 aa12.1□□□□□ -0.47
NELFE-214ENST00000625905 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
NELFE-214ENST00000625905 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
NELFE-214ENST00000625905 PPP1R1BQ9UD71 204 aaPredicted RBP12.1□□□□□ -0.47
NELFE-214ENST00000625905 ATF5Q9Y2D1 282 aaPredicted RBP12.1□□□□□ -0.47
NELFE-214ENST00000625905 COL24A1Q17RW2 1714 aa12.1□□□□□ -0.47
NELFE-214ENST00000625905 STARD3NLO95772 234 aa12.09□□□□□ -0.47
NELFE-214ENST00000625905 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
NELFE-214ENST00000625905 ADRA2BP18089 450 aa12.09□□□□□ -0.47
NELFE-214ENST00000625905 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
NELFE-214ENST00000625905 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
NELFE-214ENST00000625905 POLD1P28340 1107 aa12.08□□□□□ -0.48
NELFE-214ENST00000625905 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
NELFE-214ENST00000625905 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
NELFE-214ENST00000625905 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
NELFE-214ENST00000625905 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms