RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 ITGB4P16144 1822 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 SPEF2Q9C093 1822 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 K7ELQ4 463 aaPredicted RBP4.03□□□□□ -1.76
U1.39-201ENST00000621562 XRCC6P12956 609 aaKnown RBP eCLIP4.03□□□□□ -1.76
U1.39-201ENST00000621562 CEBPAP49715 358 aaPredicted RBP4.03□□□□□ -1.76
U1.39-201ENST00000621562 HSCBQ8IWL3 235 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 FAM43AQ8N2R8 423 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 SPRYD3Q8NCJ5 442 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 GAS2L2Q8NHY3 880 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 TNPO1Q92973 898 aaKnown RBP4.03□□□□□ -1.76
U1.39-201ENST00000621562 EYA1Q99502 592 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 USP26Q9BXU7 913 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 OSBPL3Q9H4L5 887 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 RTN4Q9NQC3 1192 aaKnown RBP4.03□□□□□ -1.76
U1.39-201ENST00000621562 AMOTL2Q9Y2J4 779 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 AKAP11Q9UKA4 1901 aa4.03□□□□□ -1.76
U1.39-201ENST00000621562 IBTKQ9P2D0 1353 aaPredicted RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 A0A1B0GUL6 1792 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 NWD2Q9ULI1 1742 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 MYH6P13533 1939 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 HTATSF1O43719 755 aaKnown RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 SMARCA5O60264 1052 aaPredicted RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 TRAK2O60296 914 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 SDSP20132 328 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 SSFA2P28290 1259 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 HOXC9P31274 260 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 HDGFP51858 240 aaKnown RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 RPAP2Q8IXW5 612 aaPredicted RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 C16orf71Q8IYS4 520 aaPredicted RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 SLC26A8Q96RN1 970 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 PANK2Q9BZ23 570 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 RRAGDQ9NQL2 400 aaPredicted RBP4.02□□□□□ -1.77
U1.39-201ENST00000621562 HEG1Q9ULI3 1381 aa4.02□□□□□ -1.77
U1.39-201ENST00000621562 SOS1Q07889 1333 aaPredicted RBP4.01□□□□□ -1.77
U1.39-201ENST00000621562 NUTM2FA1L443 756 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 DDX11L8A8MPP1 907 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 F6X3S4 739 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 KCNA6P17658 529 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 CCT4P50991 539 aaKnown RBP4.01□□□□□ -1.77
U1.39-201ENST00000621562 RABEP1Q15276 862 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 L1TD1Q5T7N2 865 aaKnown RBP4.01□□□□□ -1.77
U1.39-201ENST00000621562 GAS2L3Q86XJ1 694 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 IL17REQ8NFR9 667 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 BABAM1Q9NWV8 329 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 MIS18AQ9NYP9 233 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 STAP2Q9UGK3 403 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 TSPYL4Q9UJ04 414 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 ZDHHC9Q9Y397 364 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 NHSL1Q5SYE7 1610 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 MYH2Q9UKX2 1941 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 ARAP2Q8WZ64 1704 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 ADCY9O60503 1353 aa4.01□□□□□ -1.77
U1.39-201ENST00000621562 NUP98P52948 1817 aa4□□□□□ -1.77
U1.39-201ENST00000621562 DOCK2Q92608 1830 aa4□□□□□ -1.77
U1.39-201ENST00000621562 AOX1Q06278 1338 aa4□□□□□ -1.77
U1.39-201ENST00000621562 ERBB4Q15303 1308 aa4□□□□□ -1.77
U1.39-201ENST00000621562 KAT6BQ8WYB5 2073 aa4□□□□□ -1.77
U1.39-201ENST00000621562 PNMA6EA0A0J9YXQ4 647 aa4□□□□□ -1.77
U1.39-201ENST00000621562 BAG4O95429 457 aaKnown RBP4□□□□□ -1.77
U1.39-201ENST00000621562 SLC4A2P04920 1241 aa4□□□□□ -1.77
U1.39-201ENST00000621562 HSP90AB1P08238 724 aaKnown RBP4□□□□□ -1.77
U1.39-201ENST00000621562 HAP1P54257 671 aaPredicted RBP4□□□□□ -1.77
U1.39-201ENST00000621562 PDE1AP54750 535 aa4□□□□□ -1.77
U1.39-201ENST00000621562 FLIIQ13045 1269 aa4□□□□□ -1.77
U1.39-201ENST00000621562 POLA2Q14181 598 aa4□□□□□ -1.77
U1.39-201ENST00000621562 IL25Q9H293 177 aa4□□□□□ -1.77
U1.39-201ENST00000621562 ESF1Q9H501 851 aaKnown RBP4□□□□□ -1.77
U1.39-201ENST00000621562 ANO8Q9HCE9 1232 aaPredicted RBP4□□□□□ -1.77
U1.39-201ENST00000621562 ISY1Q9ULR0 285 aaKnown RBP4□□□□□ -1.77
U1.39-201ENST00000621562 COL22A1Q8NFW1 1626 aaPredicted RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 USP42Q9H9J4 1324 aaKnown RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 C4AP0C0L4 1744 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 C4BP0C0L5 1744 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 KDM6AO15550 1401 aaPredicted RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 NPHP4O75161 1426 aaPredicted RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 GOLGA6L3A6NEY3 463 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 GNAT3A8MTJ3 354 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 HMMRO75330 724 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 MRE11P49959 708 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 ATP8B2P98198 1209 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 PKP1Q13835 747 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 NGDNQ8NEJ9 315 aaKnown RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 SSH3Q8TE77 659 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 ESYT1Q9BSJ8 1104 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 GZF1Q9H116 711 aaPredicted RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 LMBRD1Q9NUN5 540 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 PALD1Q9ULE6 856 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 EXOC6BQ9Y2D4 811 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 EID1Q9Y6B2 187 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 PLCH1Q4KWH8 1693 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 RPAP1Q9BWH6 1393 aaPredicted RBP3.99□□□□□ -1.77
U1.39-201ENST00000621562 JCADQ9P266 1359 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 MYH13Q9UKX3 1938 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 LAMB2P55268 1798 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 STRCQ7RTU9 1775 aa3.99□□□□□ -1.77
U1.39-201ENST00000621562 PHLPP1O60346 1717 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 ERC2O15083 957 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 SOX12O15370 315 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 GNAI2P04899 355 aa3.98□□□□□ -1.77
U1.39-201ENST00000621562 HOXB7P09629 217 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms