RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 TRIM27P14373 513 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 KIF18AQ8NI77 898 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 EXOSC9Q06265 439 aaKnown RBP12.53□□□□□ -0.4
VPS11-207ENST00000620429 GAS2L2Q8NHY3 880 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 TMEM63CQ9P1W3 806 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 EID1Q9Y6B2 187 aa12.53□□□□□ -0.4
VPS11-207ENST00000620429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 LOC102724159A0A0B4J2E5 919 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 SYCE3A1L190 88 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 TNNT3P45378 269 aaPredicted RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 PWP2Q15269 919 aaKnown RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 UVSSAQ2YD98 709 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 RIMS2Q9UQ26 1411 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 AK9Q5TCS8 1911 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 TMEM2Q9UHN6 1383 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 KIF16BQ96L93 1317 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 ZBTB7CA1YPR0 619 aa12.52□□□□□ -0.41
VPS11-207ENST00000620429 CD2BP2O95400 341 aaKnown RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
VPS11-207ENST00000620429 CT47B1P0C2W7 299 aaPredicted RBP12.51□□□□□ -0.41
VPS11-207ENST00000620429 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 SIRT1Q96EB6 747 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 DIP2AQ14689 1571 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
VPS11-207ENST00000620429 CYP2C19P33261 490 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 ATF7IPQ6VMQ6 1270 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 CABP1Q9NZU7 370 aa12.51□□□□□ -0.41
VPS11-207ENST00000620429 RAD50Q92878 1312 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 ERICH4A6NGS2 130 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 NCAPGQ9BPX3 1015 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 RSPH14Q9UHP6 348 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
VPS11-207ENST00000620429 HNRNPH2P55795 449 aaKnown RBP12.5□□□□□ -0.41
VPS11-207ENST00000620429 HOMEZQ8IX15 550 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 KIAA1524Q8TCG1 905 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 TSPY26PQ9H489 355 aa12.5□□□□□ -0.41
VPS11-207ENST00000620429 NOB1Q9ULX3 412 aaKnown RBP12.5□□□□□ -0.41
VPS11-207ENST00000620429 CD163L1Q9NR16 1453 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 FYB1O15117 783 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 DHX16O60231 1041 aaKnown RBP12.49□□□□□ -0.41
VPS11-207ENST00000620429 MBD3O95983 291 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 FBLN1P23142 703 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 GTF2A1P52655 376 aaPredicted RBP12.49□□□□□ -0.41
VPS11-207ENST00000620429 C17orf53Q8N3J3 647 aaPredicted RBP12.49□□□□□ -0.41
VPS11-207ENST00000620429 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 FAM184AQ8NB25 1140 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 BRMS1Q9HCU9 246 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 RNF214Q8ND24 703 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 RASSF4Q9H2L5 321 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 TTC12Q9H892 705 aaPredicted RBP12.49□□□□□ -0.41
VPS11-207ENST00000620429 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 USP32Q8NFA0 1604 aa12.49□□□□□ -0.41
VPS11-207ENST00000620429 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
VPS11-207ENST00000620429 PIP4K2BP78356 416 aa12.48□□□□□ -0.41
VPS11-207ENST00000620429 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
VPS11-207ENST00000620429 REC8O95072 547 aa12.48□□□□□ -0.41
VPS11-207ENST00000620429 ICE2Q659A1 982 aa12.48□□□□□ -0.41
VPS11-207ENST00000620429 METP08581 1390 aa12.48□□□□□ -0.41
VPS11-207ENST00000620429 U2SURPO15042 1029 aaKnown RBP12.47□□□□□ -0.41
VPS11-207ENST00000620429 NUCB1Q02818 461 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 ZBTB40Q9NUA8 1239 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
VPS11-207ENST00000620429 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 KCNA6P17658 529 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 TXNDC2Q86VQ3 553 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.47□□□□□ -0.41
VPS11-207ENST00000620429 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
VPS11-207ENST00000620429 TPM3P06753 285 aa12.46□□□□□ -0.41
VPS11-207ENST00000620429 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
VPS11-207ENST00000620429 MUM1L1Q5H9M0 696 aa12.46□□□□□ -0.41
VPS11-207ENST00000620429 TMPOP42166 694 aaKnown RBP12.46□□□□□ -0.41
VPS11-207ENST00000620429 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
VPS11-207ENST00000620429 CEP120Q8N960 986 aa12.46□□□□□ -0.41
VPS11-207ENST00000620429 NSD2O96028 1365 aa12.46□□□□□ -0.42
VPS11-207ENST00000620429 PIK3R4Q99570 1358 aa12.46□□□□□ -0.42
VPS11-207ENST00000620429 SMTNL1A8MU46 457 aa12.46□□□□□ -0.42
VPS11-207ENST00000620429 HDGFP51858 240 aaKnown RBP12.46□□□□□ -0.42
VPS11-207ENST00000620429 HAP1P54257 671 aaPredicted RBP12.46□□□□□ -0.42
VPS11-207ENST00000620429 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
VPS11-207ENST00000620429 GUCY2CP25092 1073 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 CWC22Q9HCG8 908 aaKnown RBP12.45□□□□□ -0.42
VPS11-207ENST00000620429 BANK1Q8NDB2 785 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 ZNF397Q8NF99 534 aaPredicted RBP12.45□□□□□ -0.42
VPS11-207ENST00000620429 KIF1BPQ96EK5 621 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 SLC26A8Q96RN1 970 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 TRIM35Q9UPQ4 493 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 CEP83Q9Y592 693 aa12.45□□□□□ -0.42
VPS11-207ENST00000620429 ADGRB2O60241 1585 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms