RNA–Protein interactions for RNA: ENST00000614064.4

GTF2IRD2B-206, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 1 (best) BASIC

Gene GTF2IRD2B, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-206ENST00000614064 PDGFDQ9GZP0 370 aaPredicted RBP26.44■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 CABP4P57796 275 aa26.42■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 ZNF827Q17R98 1081 aa26.42■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 C4BP0C0L5 1744 aa26.42■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 COL5A3P25940 1745 aaPredicted RBP26.42■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 RNMTO43148 476 aaKnown RBP26.41■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 SPON1Q9HCB6 807 aa26.41■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 UBR2Q8IWV8 1755 aa26.41■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 GNAT3A8MTJ3 354 aa26.4■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 UBR3Q6ZT12 1888 aa26.39■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 ZBTB7AO95365 584 aa26.39■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 SLC52A2Q9HAB3 445 aa26.39■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 ATG3Q9NT62 314 aa26.39■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 ASAP1Q9ULH1 1129 aa26.39■■□□□ 1.82
GTF2IRD2B-206ENST00000614064 AKT1S1Q96B36 256 aa26.38■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 PNNQ9H307 717 aaKnown RBP26.38■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 NFATC2IPQ8NCF5 419 aa26.37■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 LGR6Q9HBX8 967 aa26.37■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 CEMIPQ8WUJ3 1361 aa26.36■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 LOC102724428A0A0B4J2F2 783 aa26.36■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 SIK1P57059 783 aa26.36■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 PLEKHF1Q96S99 279 aa26.36■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 TFCP2L1Q9NZI6 479 aa26.36■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 NEFMP07197 916 aa26.35■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 TJP1Q07157 1748 aa26.35■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 PPP1R1BQ9UD71 204 aaPredicted RBP26.35■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 ATF5Q9Y2D1 282 aaPredicted RBP26.35■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 COL24A1Q17RW2 1714 aa26.34■■□□□ 1.81
GTF2IRD2B-206ENST00000614064 IL17REQ8NFR9 667 aa26.32■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 HTATSF1O43719 755 aaKnown RBP26.31■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 KCPQ6ZWJ8 1503 aa26.3■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 MYH14Q7Z406 1995 aaKnown RBP26.3■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 MAPK8IP3Q9UPT6 1336 aa26.3■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 ATP6V1AP38606 617 aa26.29■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 MTFR1LQ9H019 292 aa26.29■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 PNPLA7Q6ZV29 1317 aa26.29■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 MSH5O43196 834 aa26.28■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 ANP32CO43423 234 aa26.28■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 TEFQ10587 303 aa26.28■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 WDR43Q15061 677 aaKnown RBP eCLIP26.28■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 ITPK1Q13572 414 aa26.27■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 RTF1Q92541 710 aaKnown RBP26.27■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 SLC4A9Q96Q91 983 aa26.27■■□□□ 1.8
GTF2IRD2B-206ENST00000614064 NFE2L2Q16236 605 aa26.26■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 RBM42Q9BTD8 480 aaKnown RBP26.26■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 LINC00116Q8NCU8 138 aa26.25■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 PTGER2P43116 358 aa26.24■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 AK7Q96M32 723 aa26.24■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 KDM3BQ7LBC6 1761 aa26.24■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 SLC16A10Q8TF71 515 aa26.23■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 CNTNAP4Q9C0A0 1308 aa26.22■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 PTCD1O75127 700 aaKnown RBP26.22■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 FLAD1Q8NFF5 587 aa26.22■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 SLC39A6Q13433 755 aa26.21■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 COL23A1Q86Y22 540 aaPredicted RBP26.21■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 ADAMTS8Q9UP79 889 aa26.21■■□□□ 1.79
GTF2IRD2B-206ENST00000614064 RC3H1Q5TC82 1133 aaKnown RBP26.2■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 MCM10Q7L590 875 aa26.2■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 VSIG10Q8N0Z9 540 aa26.2■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 C4AP0C0L4 1744 aa26.19■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 SSFA2P28290 1259 aa26.19■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 ZNF790Q6PG37 636 aa26.19■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 TTC5Q8N0Z6 440 aa26.19■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 RUNDC1Q96C34 613 aa26.19■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 PHF14O94880 888 aa26.18■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 SMIM5Q71RC9 77 aa26.17■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 SGIP1Q9BQI5 828 aa26.17■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 TMPOP42166 694 aaKnown RBP26.16■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 DCTN1Q14203 1278 aa26.16■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 BTBD11A6QL63 1104 aa26.15■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 GNPATO15228 680 aa26.15■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 POLD1P28340 1107 aa26.15■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 LMOD3Q0VAK6 560 aa26.15■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 ARXQ96QS3 562 aa26.15■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 LAMB4A4D0S4 1761 aa26.15■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 CCDC184Q52MB2 194 aa26.14■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 AMIGO3Q86WK7 504 aa26.14■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 CCDC146Q8IYE0 955 aa26.14■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 HEG1Q9ULI3 1381 aa26.14■■□□□ 1.78
GTF2IRD2B-206ENST00000614064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.13■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 RIPK4P57078 832 aa26.13■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 TAF7Q15545 349 aaPredicted RBP26.13■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 MSL1Q68DK7 614 aa26.13■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 ADRA2BP18089 450 aa26.12■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 CRKLP46109 303 aaKnown RBP26.12■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 DNAJC10Q8IXB1 793 aa26.12■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 ZNF496Q96IT1 587 aaPredicted RBP26.12■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 FMNL2Q96PY5 1086 aa26.12■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 RTCBQ9Y3I0 505 aaKnown RBP26.12■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 FHDC1Q9C0D6 1143 aaPredicted RBP26.11■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 MRS2Q9HD23 443 aa26.11■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 RPS6KA4O75676 772 aa26.1■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 KLHL34Q8N239 644 aa26.1■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 PNISRQ8TF01 805 aaKnown RBP26.1■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 CYP19A1P11511 503 aaPredicted RBP26.09■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 TEX13AQ9BXU3 409 aaPredicted RBP26.09■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 CCDC87Q9NVE4 849 aa26.08■■□□□ 1.77
GTF2IRD2B-206ENST00000614064 KCNQ3O43525 872 aa26.07■■□□□ 1.76
GTF2IRD2B-206ENST00000614064 INTS5Q6P9B9 1019 aaKnown RBP26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms