RNA–Protein interactions for RNA: ENST00000605881.5

TRIM49D1-203, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM49D1, Length 1,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-203ENST00000605881 WWC3Q9ULE0 1092 aa9.44□□□□□ -0.9
TRIM49D1-203ENST00000605881 NSD2O96028 1365 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 PHF14O94880 888 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 COL24A1Q17RW2 1714 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 PUS7Q96PZ0 661 aaKnown RBP9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 CEP350Q5VT06 3117 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 PCDH11XQ9BZA7 1347 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 PCDH11YQ9BZA8 1340 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 PALLDQ8WX93 1383 aa9.43□□□□□ -0.9
TRIM49D1-203ENST00000605881 SMG6Q86US8 1419 aaKnown RBP9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 POTEJP0CG39 1038 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 C7P10643 843 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 SSFA2P28290 1259 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 NEUROD1Q13562 356 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 LCE2DQ5TA82 110 aaPredicted RBP9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 SLC39A7Q92504 469 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 MAP3K19Q56UN5 1328 aa9.42□□□□□ -0.9
TRIM49D1-203ENST00000605881 ASTLQ6HA08 431 aaPredicted RBP9.41□□□□□ -0.9
TRIM49D1-203ENST00000605881 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
TRIM49D1-203ENST00000605881 DNAJC5GQ8N7S2 189 aa9.41□□□□□ -0.9
TRIM49D1-203ENST00000605881 SIN3AQ96ST3 1273 aa9.41□□□□□ -0.9
TRIM49D1-203ENST00000605881 TGFB2P61812 414 aa9.4□□□□□ -0.9
TRIM49D1-203ENST00000605881 NBPF6Q5VWK0 638 aa9.4□□□□□ -0.9
TRIM49D1-203ENST00000605881 NBPF4Q96M43 638 aa9.4□□□□□ -0.9
TRIM49D1-203ENST00000605881 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
TRIM49D1-203ENST00000605881 FSTL1Q12841 308 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 USHBP1Q8N6Y0 703 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 A0A1W2PP64 1363 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 CD163L1Q9NR16 1453 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 ZNF316A6NFI3 1004 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 TNS4Q8IZW8 715 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 NLGN1Q8N2Q7 840 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 KLRG1Q96E93 195 aa9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 FAM163AQ96GL9 167 aaPredicted RBP9.39□□□□□ -0.91
TRIM49D1-203ENST00000605881 LY75O60449 1722 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 LTN1O94822 1766 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 MEGF6O75095 1541 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 FAM208AQ9UK61 1670 aaKnown RBP9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 LOC102724428A0A0B4J2F2 783 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 GNPATO15228 680 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 ATMINO43313 823 aaPredicted RBP9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 FCHSD2O94868 740 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 MMP10P09238 476 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 SIK1P57059 783 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 RRS1Q15050 365 aaKnown RBP9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 CCDC87Q9NVE4 849 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 SPG7Q9UQ90 795 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 KDM2BQ8NHM5 1336 aa9.38□□□□□ -0.91
TRIM49D1-203ENST00000605881 GOLGB1Q14789 3259 aaKnown RBP9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 DOT1LQ8TEK3 1739 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 A0A0G2JLW4 131 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 FBLN1P23142 703 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 ATP6V1AP38606 617 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 TMF1P82094 1093 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 TRAPPC3LQ5T215 181 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 COL13A1Q5TAT6 717 aaPredicted RBP9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 PIGBQ92521 554 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 TMOD3Q9NYL9 352 aa9.37□□□□□ -0.91
TRIM49D1-203ENST00000605881 TUBGCP6Q96RT7 1819 aa9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 PRELPP51888 382 aa9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 JMYQ8N9B5 988 aa9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 MS4A3Q96HJ5 214 aa9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 SCUBE2Q9NQ36 999 aa9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
TRIM49D1-203ENST00000605881 PLEKHG2Q9H7P9 1386 aa9.35□□□□□ -0.91
TRIM49D1-203ENST00000605881 CYP27B1O15528 508 aa9.35□□□□□ -0.91
TRIM49D1-203ENST00000605881 C9orf131Q5VYM1 1079 aa9.35□□□□□ -0.91
TRIM49D1-203ENST00000605881 SMIM5Q71RC9 77 aa9.35□□□□□ -0.91
TRIM49D1-203ENST00000605881 LINC00116Q8NCU8 138 aa9.35□□□□□ -0.91
TRIM49D1-203ENST00000605881 INSRP06213 1382 aa9.34□□□□□ -0.91
TRIM49D1-203ENST00000605881 RFC4P35249 363 aa9.34□□□□□ -0.91
TRIM49D1-203ENST00000605881 NKX1-1Q15270 411 aaPredicted RBP9.34□□□□□ -0.91
TRIM49D1-203ENST00000605881 GGNBP2Q9H3C7 697 aa9.34□□□□□ -0.91
TRIM49D1-203ENST00000605881 PIM2Q9P1W9 311 aa9.34□□□□□ -0.91
TRIM49D1-203ENST00000605881 C5P01031 1676 aa9.34□□□□□ -0.91
TRIM49D1-203ENST00000605881 FYB1O15117 783 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 DPEP1P16444 411 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 HSP90AB2PQ58FF8 381 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 AMIGO3Q86WK7 504 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 SMC1BQ8NDV3 1235 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 FLT4P35916 1363 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 KIF24Q5T7B8 1368 aa9.33□□□□□ -0.92
TRIM49D1-203ENST00000605881 C4BP0C0L5 1744 aa9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 HTRA3P83110 453 aa9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 DALRD3Q5D0E6 543 aaKnown RBP9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 IFNL2Q8IZJ0 200 aa9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 RNF181Q9P0P0 153 aa9.32□□□□□ -0.92
TRIM49D1-203ENST00000605881 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms