RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 UBR2Q8IWV8 1755 aa20.23■□□□□ 0.83
GCDH-209ENST00000589039 KCNQ2O43526 872 aa20.23■□□□□ 0.83
GCDH-209ENST00000589039 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
GCDH-209ENST00000589039 SYTL4Q96C24 671 aaPredicted RBP20.23■□□□□ 0.83
GCDH-209ENST00000589039 THUMPD2Q9BTF0 503 aaKnown RBP20.23■□□□□ 0.83
GCDH-209ENST00000589039 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
GCDH-209ENST00000589039 LY75O60449 1722 aa20.22■□□□□ 0.83
GCDH-209ENST00000589039 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
GCDH-209ENST00000589039 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
GCDH-209ENST00000589039 TRIM37O94972 964 aa20.21■□□□□ 0.83
GCDH-209ENST00000589039 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
GCDH-209ENST00000589039 PIGBQ92521 554 aa20.21■□□□□ 0.83
GCDH-209ENST00000589039 ZNF521Q96K83 1311 aa20.21■□□□□ 0.83
GCDH-209ENST00000589039 PTF1AQ7RTS3 328 aa20.2■□□□□ 0.82
GCDH-209ENST00000589039 TAF7Q15545 349 aaPredicted RBP20.19■□□□□ 0.82
GCDH-209ENST00000589039 WDR63Q8IWG1 891 aa20.19■□□□□ 0.82
GCDH-209ENST00000589039 ZNF831Q5JPB2 1677 aa20.17■□□□□ 0.82
GCDH-209ENST00000589039 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
GCDH-209ENST00000589039 IL16Q14005 1332 aa20.17■□□□□ 0.82
GCDH-209ENST00000589039 BTBD11A6QL63 1104 aa20.16■□□□□ 0.82
GCDH-209ENST00000589039 UPF1Q92900 1129 aaKnown RBP eCLIP20.16■□□□□ 0.82
GCDH-209ENST00000589039 RREB1Q92766 1687 aa20.16■□□□□ 0.82
GCDH-209ENST00000589039 ZNF853P0CG23 659 aa20.15■□□□□ 0.82
GCDH-209ENST00000589039 CFAP44Q96MT7 982 aa20.15■□□□□ 0.82
GCDH-209ENST00000589039 IFT57Q9NWB7 429 aa20.15■□□□□ 0.82
GCDH-209ENST00000589039 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
GCDH-209ENST00000589039 TAF1LQ8IZX4 1826 aa20.15■□□□□ 0.82
GCDH-209ENST00000589039 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
GCDH-209ENST00000589039 KCPQ6ZWJ8 1503 aa20.14■□□□□ 0.81
GCDH-209ENST00000589039 CHL1O00533 1208 aa20.14■□□□□ 0.81
GCDH-209ENST00000589039 GNAI1P63096 354 aa20.14■□□□□ 0.81
GCDH-209ENST00000589039 CCDC125Q86Z20 511 aa20.14■□□□□ 0.81
GCDH-209ENST00000589039 SMARCC1Q92922 1105 aaPredicted RBP20.14■□□□□ 0.81
GCDH-209ENST00000589039 ATG3Q9NT62 314 aa20.14■□□□□ 0.81
GCDH-209ENST00000589039 ASAP1Q9ULH1 1129 aa20.14■□□□□ 0.81
GCDH-209ENST00000589039 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
GCDH-209ENST00000589039 PALLDQ8WX93 1383 aa20.12■□□□□ 0.81
GCDH-209ENST00000589039 APBA3O96018 575 aa20.12■□□□□ 0.81
GCDH-209ENST00000589039 GOLGA2Q08379 1002 aa20.12■□□□□ 0.81
GCDH-209ENST00000589039 SLC39A6Q13433 755 aa20.12■□□□□ 0.81
GCDH-209ENST00000589039 SF3B2Q13435 895 aaKnown RBP20.12■□□□□ 0.81
GCDH-209ENST00000589039 MIS18AQ9NYP9 233 aa20.12■□□□□ 0.81
GCDH-209ENST00000589039 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
GCDH-209ENST00000589039 LAS1LQ9Y4W2 734 aaKnown RBP20.12■□□□□ 0.81
GCDH-209ENST00000589039 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
GCDH-209ENST00000589039 TJP1Q07157 1748 aa20.11■□□□□ 0.81
GCDH-209ENST00000589039 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
GCDH-209ENST00000589039 C5P01031 1676 aa20.1■□□□□ 0.81
GCDH-209ENST00000589039 PLSCR1O15162 318 aa20.1■□□□□ 0.81
GCDH-209ENST00000589039 MBIPQ9NS73 344 aa20.1■□□□□ 0.81
GCDH-209ENST00000589039 COL5A3P25940 1745 aaPredicted RBP20.1■□□□□ 0.81
GCDH-209ENST00000589039 NUP188Q5SRE5 1749 aa20.1■□□□□ 0.81
GCDH-209ENST00000589039 KCNQ3O43525 872 aa20.09■□□□□ 0.81
GCDH-209ENST00000589039 SPINK5Q9NQ38 1064 aaPredicted RBP20.09■□□□□ 0.81
GCDH-209ENST00000589039 E9PSI1 815 aa20.08■□□□□ 0.81
GCDH-209ENST00000589039 YTHDC1Q96MU7 727 aaKnown RBP20.08■□□□□ 0.81
GCDH-209ENST00000589039 MYH16Q9H6N6 1097 aa20.08■□□□□ 0.81
GCDH-209ENST00000589039 BAG6P46379 1132 aa20.07■□□□□ 0.8
GCDH-209ENST00000589039 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
GCDH-209ENST00000589039 ZNF496Q96IT1 587 aaPredicted RBP20.07■□□□□ 0.8
GCDH-209ENST00000589039 FMNL2Q96PY5 1086 aa20.07■□□□□ 0.8
GCDH-209ENST00000589039 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
GCDH-209ENST00000589039 PTCD1O75127 700 aaKnown RBP20.06■□□□□ 0.8
GCDH-209ENST00000589039 EIF4A1P60842 406 aaKnown RBP20.06■□□□□ 0.8
GCDH-209ENST00000589039 HEG1Q9ULI3 1381 aa20.06■□□□□ 0.8
GCDH-209ENST00000589039 LOC102724428A0A0B4J2F2 783 aa20.05■□□□□ 0.8
GCDH-209ENST00000589039 SIK1P57059 783 aa20.05■□□□□ 0.8
GCDH-209ENST00000589039 VSIG10Q8N0Z9 540 aa20.05■□□□□ 0.8
GCDH-209ENST00000589039 TSR2Q969E8 191 aaKnown RBP20.05■□□□□ 0.8
GCDH-209ENST00000589039 CDCA7LQ96GN5 454 aa20.05■□□□□ 0.8
GCDH-209ENST00000589039 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
GCDH-209ENST00000589039 TRMT2AQ8IZ69 625 aaKnown RBP20.04■□□□□ 0.8
GCDH-209ENST00000589039 SLC4A9Q96Q91 983 aa20.04■□□□□ 0.8
GCDH-209ENST00000589039 CAMKK2Q96RR4 588 aa20.04■□□□□ 0.8
GCDH-209ENST00000589039 CACNA1FO60840 1977 aa20.04■□□□□ 0.8
GCDH-209ENST00000589039 MYH14Q7Z406 1995 aaKnown RBP20.03■□□□□ 0.8
GCDH-209ENST00000589039 EN1Q05925 392 aaPredicted RBP20.03■□□□□ 0.8
GCDH-209ENST00000589039 SLC27A3Q5K4L6 730 aa20.03■□□□□ 0.8
GCDH-209ENST00000589039 ATP6V1AP38606 617 aa20.02■□□□□ 0.8
GCDH-209ENST00000589039 TXNRD1Q16881 649 aa20.02■□□□□ 0.8
GCDH-209ENST00000589039 DEFB132Q7Z7B7 95 aa20.02■□□□□ 0.8
GCDH-209ENST00000589039 PROM2Q8N271 834 aa20.02■□□□□ 0.8
GCDH-209ENST00000589039 CCNL1Q9UK58 526 aaPredicted RBP20.02■□□□□ 0.8
GCDH-209ENST00000589039 C4BP0C0L5 1744 aa20.02■□□□□ 0.79
GCDH-209ENST00000589039 SNRPA1P09661 255 aaKnown RBP20.01■□□□□ 0.79
GCDH-209ENST00000589039 TUBGCP6Q96RT7 1819 aa20■□□□□ 0.79
GCDH-209ENST00000589039 GIGYF1O75420 1035 aaPredicted RBP20■□□□□ 0.79
GCDH-209ENST00000589039 EZH2Q15910 746 aaKnown RBP20■□□□□ 0.79
GCDH-209ENST00000589039 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
GCDH-209ENST00000589039 TEX13AQ9BXU3 409 aaPredicted RBP20■□□□□ 0.79
GCDH-209ENST00000589039 HOXB7P09629 217 aa19.99■□□□□ 0.79
GCDH-209ENST00000589039 HMGB2P26583 209 aaKnown RBP19.99■□□□□ 0.79
GCDH-209ENST00000589039 ITPK1Q13572 414 aa19.99■□□□□ 0.79
GCDH-209ENST00000589039 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
GCDH-209ENST00000589039 LRRC4BQ9NT99 713 aa19.99■□□□□ 0.79
GCDH-209ENST00000589039 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
GCDH-209ENST00000589039 EXOSC9Q06265 439 aaKnown RBP19.98■□□□□ 0.79
GCDH-209ENST00000589039 DNAJC10Q8IXB1 793 aa19.98■□□□□ 0.79
GCDH-209ENST00000589039 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
GCDH-209ENST00000589039 UBR3Q6ZT12 1888 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms