RNA–Protein interactions for RNA: ENST00000584340.1

PSMD11-210, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 4

Gene PSMD11, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-210ENST00000584340 TAF1LQ8IZX4 1826 aa14.29□□□□□ -0.12
PSMD11-210ENST00000584340 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
PSMD11-210ENST00000584340 DCTN1Q14203 1278 aa14.29□□□□□ -0.12
PSMD11-210ENST00000584340 TXNRD1Q16881 649 aa14.29□□□□□ -0.12
PSMD11-210ENST00000584340 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
PSMD11-210ENST00000584340 SYTL4Q96C24 671 aaPredicted RBP14.28□□□□□ -0.12
PSMD11-210ENST00000584340 SRCAPQ6ZRS2 3230 aa14.28□□□□□ -0.12
PSMD11-210ENST00000584340 CICQ96RK0 1608 aaPredicted RBP14.27□□□□□ -0.12
PSMD11-210ENST00000584340 KCPQ6ZWJ8 1503 aa14.27□□□□□ -0.12
PSMD11-210ENST00000584340 CCER2I3L3R5 266 aa14.27□□□□□ -0.13
PSMD11-210ENST00000584340 KCNQ4P56696 695 aa14.27□□□□□ -0.13
PSMD11-210ENST00000584340 MCM10Q7L590 875 aa14.27□□□□□ -0.13
PSMD11-210ENST00000584340 TMOD3Q9NYL9 352 aa14.27□□□□□ -0.13
PSMD11-210ENST00000584340 PALLDQ8WX93 1383 aa14.26□□□□□ -0.13
PSMD11-210ENST00000584340 CABP4P57796 275 aa14.26□□□□□ -0.13
PSMD11-210ENST00000584340 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
PSMD11-210ENST00000584340 WDR43Q15061 677 aaKnown RBP eCLIP14.26□□□□□ -0.13
PSMD11-210ENST00000584340 PNNQ9H307 717 aaKnown RBP14.26□□□□□ -0.13
PSMD11-210ENST00000584340 ANO8Q9HCE9 1232 aaPredicted RBP14.26□□□□□ -0.13
PSMD11-210ENST00000584340 APAF1O14727 1248 aa14.25□□□□□ -0.13
PSMD11-210ENST00000584340 THUMPD2Q9BTF0 503 aaKnown RBP14.25□□□□□ -0.13
PSMD11-210ENST00000584340 RRP7AQ9Y3A4 280 aaKnown RBP14.25□□□□□ -0.13
PSMD11-210ENST00000584340 TJP1Q07157 1748 aa14.24□□□□□ -0.13
PSMD11-210ENST00000584340 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
PSMD11-210ENST00000584340 KCNQ3O43525 872 aa14.24□□□□□ -0.13
PSMD11-210ENST00000584340 RIPK4P57078 832 aa14.24□□□□□ -0.13
PSMD11-210ENST00000584340 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
PSMD11-210ENST00000584340 ITPK1Q13572 414 aa14.24□□□□□ -0.13
PSMD11-210ENST00000584340 KDM3BQ7LBC6 1761 aa14.24□□□□□ -0.13
PSMD11-210ENST00000584340 COL5A3P25940 1745 aaPredicted RBP14.24□□□□□ -0.13
PSMD11-210ENST00000584340 C5P01031 1676 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 TUBGCP6Q96RT7 1819 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 LOC102724428A0A0B4J2F2 783 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 SIK1P57059 783 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 SLC27A3Q5K4L6 730 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 AMIGO3Q86WK7 504 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 AKT1S1Q96B36 256 aa14.23□□□□□ -0.13
PSMD11-210ENST00000584340 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
PSMD11-210ENST00000584340 ZNF827Q17R98 1081 aa14.22□□□□□ -0.13
PSMD11-210ENST00000584340 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
PSMD11-210ENST00000584340 SMARCC1Q92922 1105 aaPredicted RBP14.22□□□□□ -0.13
PSMD11-210ENST00000584340 MAPK8IP3Q9UPT6 1336 aa14.21□□□□□ -0.13
PSMD11-210ENST00000584340 QSER1Q2KHR3 1735 aa14.21□□□□□ -0.14
PSMD11-210ENST00000584340 ZNF853P0CG23 659 aa14.2□□□□□ -0.14
PSMD11-210ENST00000584340 TAF7Q15545 349 aaPredicted RBP14.2□□□□□ -0.14
PSMD11-210ENST00000584340 ZNF790Q6PG37 636 aa14.2□□□□□ -0.14
PSMD11-210ENST00000584340 LINC00116Q8NCU8 138 aa14.2□□□□□ -0.14
PSMD11-210ENST00000584340 MIS18AQ9NYP9 233 aa14.2□□□□□ -0.14
PSMD11-210ENST00000584340 C4BP0C0L5 1744 aa14.2□□□□□ -0.14
PSMD11-210ENST00000584340 CASZ1Q86V15 1759 aa14.19□□□□□ -0.14
PSMD11-210ENST00000584340 UBR3Q6ZT12 1888 aa14.19□□□□□ -0.14
PSMD11-210ENST00000584340 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
PSMD11-210ENST00000584340 FAM9BQ8IZU0 186 aa14.19□□□□□ -0.14
PSMD11-210ENST00000584340 ZNF496Q96IT1 587 aaPredicted RBP14.19□□□□□ -0.14
PSMD11-210ENST00000584340 PDGFDQ9GZP0 370 aaPredicted RBP14.19□□□□□ -0.14
PSMD11-210ENST00000584340 CCNL1Q9UK58 526 aaPredicted RBP14.19□□□□□ -0.14
PSMD11-210ENST00000584340 SENP3-EIF4A1A0A087X0R7 540 aa14.18□□□□□ -0.14
PSMD11-210ENST00000584340 CHL1O00533 1208 aa14.18□□□□□ -0.14
PSMD11-210ENST00000584340 TEFQ10587 303 aa14.18□□□□□ -0.14
PSMD11-210ENST00000584340 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
PSMD11-210ENST00000584340 RTF1Q92541 710 aaKnown RBP14.18□□□□□ -0.14
PSMD11-210ENST00000584340 ZNF521Q96K83 1311 aa14.17□□□□□ -0.14
PSMD11-210ENST00000584340 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
PSMD11-210ENST00000584340 PTCD1O75127 700 aaKnown RBP14.17□□□□□ -0.14
PSMD11-210ENST00000584340 SLC15A2Q16348 729 aa14.17□□□□□ -0.14
PSMD11-210ENST00000584340 WWC1Q8IX03 1113 aa14.17□□□□□ -0.14
PSMD11-210ENST00000584340 COL24A1Q17RW2 1714 aa14.16□□□□□ -0.14
PSMD11-210ENST00000584340 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
PSMD11-210ENST00000584340 NEFMP07197 916 aa14.16□□□□□ -0.14
PSMD11-210ENST00000584340 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
PSMD11-210ENST00000584340 INTS5Q6P9B9 1019 aaKnown RBP14.16□□□□□ -0.14
PSMD11-210ENST00000584340 SMIM5Q71RC9 77 aa14.16□□□□□ -0.14
PSMD11-210ENST00000584340 VSIG10Q8N0Z9 540 aa14.16□□□□□ -0.14
PSMD11-210ENST00000584340 CYP19A1P11511 503 aaPredicted RBP14.15□□□□□ -0.14
PSMD11-210ENST00000584340 EIF4A1P60842 406 aaKnown RBP14.15□□□□□ -0.14
PSMD11-210ENST00000584340 R3HDM1Q15032 1099 aaKnown RBP14.15□□□□□ -0.14
PSMD11-210ENST00000584340 DNAJC10Q8IXB1 793 aa14.15□□□□□ -0.14
PSMD11-210ENST00000584340 BABAM1Q9NWV8 329 aa14.15□□□□□ -0.14
PSMD11-210ENST00000584340 PNPLA7Q6ZV29 1317 aa14.15□□□□□ -0.15
PSMD11-210ENST00000584340 RC3H1Q5TC82 1133 aaKnown RBP14.14□□□□□ -0.15
PSMD11-210ENST00000584340 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
PSMD11-210ENST00000584340 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
PSMD11-210ENST00000584340 PSDA5PKW4 1024 aaPredicted RBP14.13□□□□□ -0.15
PSMD11-210ENST00000584340 LMOD3Q0VAK6 560 aa14.13□□□□□ -0.15
PSMD11-210ENST00000584340 CFAP44Q96MT7 982 aa14.13□□□□□ -0.15
PSMD11-210ENST00000584340 USP16Q9Y5T5 823 aa14.13□□□□□ -0.15
PSMD11-210ENST00000584340 CNTNAP4Q9C0A0 1308 aa14.13□□□□□ -0.15
PSMD11-210ENST00000584340 GIGYF1O75420 1035 aaPredicted RBP14.12□□□□□ -0.15
PSMD11-210ENST00000584340 CRKLP46109 303 aaKnown RBP14.11□□□□□ -0.15
PSMD11-210ENST00000584340 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
PSMD11-210ENST00000584340 NBPF14Q5TI25 921 aa14.11□□□□□ -0.15
PSMD11-210ENST00000584340 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
PSMD11-210ENST00000584340 FMNL2Q96PY5 1086 aa14.11□□□□□ -0.15
PSMD11-210ENST00000584340 LAMB4A4D0S4 1761 aa14.1□□□□□ -0.15
PSMD11-210ENST00000584340 SGIP1Q9BQI5 828 aa14.1□□□□□ -0.15
PSMD11-210ENST00000584340 MBIPQ9NS73 344 aa14.1□□□□□ -0.15
PSMD11-210ENST00000584340 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
PSMD11-210ENST00000584340 C4AP0C0L4 1744 aa14.1□□□□□ -0.15
PSMD11-210ENST00000584340 NBPF26B4DH59 902 aa14.09□□□□□ -0.15
PSMD11-210ENST00000584340 RPS6KA4O75676 772 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms