RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 TTC22Q5TAA0 569 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 SMC2O95347 1197 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 MAGEA9P43362 315 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 CKAP2LQ8IYA6 745 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 RBM28Q9NW13 759 aaKnown RBP12.12□□□□□ -0.47
CDH8-211ENST00000584337 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
CDH8-211ENST00000584337 ZNF165P49910 485 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 KIF1BPQ96EK5 621 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 SRLQ86TD4 932 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 RILPL2Q969X0 211 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 CXorf56Q9H5V9 222 aa12.12□□□□□ -0.47
CDH8-211ENST00000584337 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
CDH8-211ENST00000584337 HMMRO75330 724 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 RBM6P78332 1123 aaKnown RBP12.11□□□□□ -0.47
CDH8-211ENST00000584337 TYRO3Q06418 890 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 SMC1AQ14683 1233 aaKnown RBP12.11□□□□□ -0.47
CDH8-211ENST00000584337 UPF3BQ9BZI7 483 aaKnown RBP12.11□□□□□ -0.47
CDH8-211ENST00000584337 PZPP20742 1482 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 PSEN1P49768 467 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 CLCN6P51797 869 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 ZNF75DP51815 510 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 SATB1Q01826 763 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 POLKQ9UBT6 870 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 KRT85P78386 507 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 ANO6Q4KMQ2 910 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 ZSCAN22P10073 491 aaPredicted RBP12.11□□□□□ -0.47
CDH8-211ENST00000584337 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
CDH8-211ENST00000584337 RAD50Q92878 1312 aa12.11□□□□□ -0.47
CDH8-211ENST00000584337 ATP2B1P20020 1258 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 ACTN2P35609 894 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 MCTP2Q6DN12 878 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 EP400NLQ6ZTU2 488 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 NUTM2FA1L443 756 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 SMARCE1Q969G3 411 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 STX6O43752 255 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 SSR1P43307 286 aaKnown RBP12.1□□□□□ -0.47
CDH8-211ENST00000584337 MTHFSP49914 203 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
CDH8-211ENST00000584337 SRCIN1Q9C0H9 1055 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 SLC52A1Q9NWF4 448 aa12.1□□□□□ -0.47
CDH8-211ENST00000584337 CARMIL2Q6F5E8 1435 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 CTTNBP2Q8WZ74 1663 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 RPAINQ86UA6 219 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 NRBP1Q9UHY1 535 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 SPAG9O60271 1321 aaKnown RBP12.09□□□□□ -0.47
CDH8-211ENST00000584337 CCDC69A6NI79 296 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 GSDMDP57764 484 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 SRRTQ9BXP5 876 aaKnown RBP12.09□□□□□ -0.47
CDH8-211ENST00000584337 ELP1O95163 1332 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 TUBB4AP04350 444 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 SDSP20132 328 aa12.09□□□□□ -0.47
CDH8-211ENST00000584337 DHX8Q14562 1220 aaKnown RBP12.09□□□□□ -0.47
CDH8-211ENST00000584337 ELL2O00472 640 aaPredicted RBP12.08□□□□□ -0.48
CDH8-211ENST00000584337 ATP8B1O43520 1251 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 EXOC4Q96A65 974 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 VPS18Q9P253 973 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 SUFUQ9UMX1 484 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 ASXL1Q8IXJ9 1541 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 ERLIN1O75477 346 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 ZNF853P0CG23 659 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 CACTINQ8WUQ7 758 aaKnown RBP12.08□□□□□ -0.48
CDH8-211ENST00000584337 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 SNAPC4Q5SXM2 1469 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
CDH8-211ENST00000584337 PLEKHM2Q8IWE5 1019 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 HOMEZQ8IX15 550 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 CEP120Q8N960 986 aa12.08□□□□□ -0.48
CDH8-211ENST00000584337 SARNPP82979 210 aaKnown RBP12.07□□□□□ -0.48
CDH8-211ENST00000584337 DONSONQ9NYP3 566 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 MKRN1Q9UHC7 482 aaKnown RBP12.07□□□□□ -0.48
CDH8-211ENST00000584337 ABCC2Q92887 1545 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
CDH8-211ENST00000584337 CAVIN2O95810 425 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDH8-211ENST00000584337 MMS22LQ6ZRQ5 1243 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 DDX11Q96FC9 970 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 DNAI1Q9UI46 699 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDH8-211ENST00000584337 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 PPP2R5AQ15172 486 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 GBP6Q6ZN66 633 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 PRAG1Q86YV5 1406 aa12.07□□□□□ -0.48
CDH8-211ENST00000584337 DDX19AQ9NUU7 478 aaKnown RBP12.06□□□□□ -0.48
CDH8-211ENST00000584337 ST5P78524 1137 aa12.06□□□□□ -0.48
CDH8-211ENST00000584337 NAT10Q9H0A0 1025 aaKnown RBP12.06□□□□□ -0.48
CDH8-211ENST00000584337 FAM177A1Q8N128 213 aaPredicted RBP12.06□□□□□ -0.48
CDH8-211ENST00000584337 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
CDH8-211ENST00000584337 TRAK1Q9UPV9 953 aa12.06□□□□□ -0.48
CDH8-211ENST00000584337 CLASP1Q7Z460 1538 aa12.06□□□□□ -0.48
CDH8-211ENST00000584337 ARHGAP31Q2M1Z3 1444 aa12.06□□□□□ -0.48
CDH8-211ENST00000584337 FAM135AQ9P2D6 1515 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms