RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MAP3K19Q56UN5 1328 aa14.33□□□□□ -0.11
CDK5RAP3-231ENST00000584063 VIRMAQ69YN4 1812 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-231ENST00000584063 ZNF142P52746 1687 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-231ENST00000584063 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
CDK5RAP3-231ENST00000584063 CDC42BPGQ6DT37 1551 aa14.33□□□□□ -0.12
CDK5RAP3-231ENST00000584063 CD2BP2O95400 341 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 BRD1O95696 1058 aa14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 HSP90AA1P07900 732 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 HSCBQ8IWL3 235 aa14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 FAM43AQ8N2R8 423 aa14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 IL16Q14005 1332 aa14.32□□□□□ -0.12
CDK5RAP3-231ENST00000584063 ANKRD26Q9UPS8 1709 aa14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 KIF20BQ96Q89 1820 aa14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 LOC102724159A0A0B4J2E5 919 aa14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 HDAC1Q13547 482 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 PWP2Q15269 919 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 SH3BP1Q9Y3L3 701 aa14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 DIP2AQ14689 1571 aa14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 SMC5Q8IY18 1101 aa14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 MAP2P11137 1827 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-231ENST00000584063 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
CDK5RAP3-231ENST00000584063 MIS18AQ9NYP9 233 aa14.3□□□□□ -0.12
CDK5RAP3-231ENST00000584063 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
CDK5RAP3-231ENST00000584063 CT47B1P0C2W7 299 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-231ENST00000584063 ATF3P18847 181 aa14.3□□□□□ -0.12
CDK5RAP3-231ENST00000584063 MCM10Q7L590 875 aa14.3□□□□□ -0.12
CDK5RAP3-231ENST00000584063 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-231ENST00000584063 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
CDK5RAP3-231ENST00000584063 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
CDK5RAP3-231ENST00000584063 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
CDK5RAP3-231ENST00000584063 ZBTB7BO15156 539 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-231ENST00000584063 TWISTNBQ3B726 338 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-231ENST00000584063 TTC21AQ8NDW8 1320 aa14.28□□□□□ -0.12
CDK5RAP3-231ENST00000584063 XRN1Q8IZH2 1706 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-231ENST00000584063 HSP90AB4PQ58FF6 505 aa14.28□□□□□ -0.12
CDK5RAP3-231ENST00000584063 CHD2O14647 1828 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-231ENST00000584063 IPO8O15397 1037 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-231ENST00000584063 NUCB1Q02818 461 aa14.27□□□□□ -0.12
CDK5RAP3-231ENST00000584063 L1TD1Q5T7N2 865 aaKnown RBP14.27□□□□□ -0.12
CDK5RAP3-231ENST00000584063 C19orf44Q9H6X5 657 aa14.27□□□□□ -0.12
CDK5RAP3-231ENST00000584063 AATKQ6ZMQ8 1374 aa14.27□□□□□ -0.13
CDK5RAP3-231ENST00000584063 CHD1LQ86WJ1 897 aa14.27□□□□□ -0.13
CDK5RAP3-231ENST00000584063 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
CDK5RAP3-231ENST00000584063 EXOC8Q8IYI6 725 aa14.26□□□□□ -0.13
CDK5RAP3-231ENST00000584063 TNPO1Q92973 898 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-231ENST00000584063 ZNF853P0CG23 659 aa14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 ZC3H6P61129 1189 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 GAS2L3Q86XJ1 694 aa14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 C16orf71Q8IYS4 520 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 EYA1Q99502 592 aa14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 NALCNQ8IZF0 1738 aa14.25□□□□□ -0.13
CDK5RAP3-231ENST00000584063 PSEN1P49768 467 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 GNAI1P63096 354 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 KRT28Q7Z3Y7 464 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 OVOS2A0A0J9YW53 1432 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 OVOS2Q6IE36 1432 aa14.24□□□□□ -0.13
CDK5RAP3-231ENST00000584063 CABLES1Q8TDN4 633 aa14.23□□□□□ -0.13
CDK5RAP3-231ENST00000584063 OTUD7AQ8TE49 926 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-231ENST00000584063 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-231ENST00000584063 HOXC9P31274 260 aa14.23□□□□□ -0.13
CDK5RAP3-231ENST00000584063 CHAMP1Q96JM3 812 aa14.23□□□□□ -0.13
CDK5RAP3-231ENST00000584063 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
CDK5RAP3-231ENST00000584063 SSFA2P28290 1259 aa14.22□□□□□ -0.13
CDK5RAP3-231ENST00000584063 TBC1D9Q6ZT07 1266 aa14.22□□□□□ -0.13
CDK5RAP3-231ENST00000584063 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 SSH2Q76I76 1423 aa14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 SMARCA5O60264 1052 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 RTF1Q92541 710 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 LRRC59Q96AG4 307 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 LMTK3Q96Q04 1460 aa14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 FLT4P35916 1363 aa14.21□□□□□ -0.13
CDK5RAP3-231ENST00000584063 SEMA3FQ13275 785 aa14.21□□□□□ -0.14
CDK5RAP3-231ENST00000584063 GRPEL1Q9HAV7 217 aa14.21□□□□□ -0.14
CDK5RAP3-231ENST00000584063 ANKARQ7Z5J8 1434 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 MON2Q7Z3U7 1717 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 FSD2A1L4K1 749 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 GCP02774 474 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 MTHFSDQ2M296 383 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 AXDND1Q5T1B0 1012 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 GAS2L2Q8NHY3 880 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 KIF2CQ99661 725 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 ABCC4O15439 1325 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 AKAP12Q02952 1782 aa14.2□□□□□ -0.14
CDK5RAP3-231ENST00000584063 DLG5Q8TDM6 1919 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 ERBB4Q15303 1308 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 AK9Q5TCS8 1911 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 STRCP1A6NGW2 1772 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 F6X3S4 739 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 IRF6O14896 467 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 SBNO1A3KN83 1393 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 USP31Q70CQ4 1352 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 TOPAZ1Q8N9V7 1692 aa14.19□□□□□ -0.14
CDK5RAP3-231ENST00000584063 GSPT1P15170 499 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-231ENST00000584063 G2E3Q7L622 706 aa14.18□□□□□ -0.14
CDK5RAP3-231ENST00000584063 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
CDK5RAP3-231ENST00000584063 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms