RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 DOT1LQ8TEK3 1739 aa15.28■□□□□ 0.04
SNORD3C-201ENST00000580533 PRIM1P49642 420 aaKnown RBP15.27■□□□□ 0.04
SNORD3C-201ENST00000580533 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
SNORD3C-201ENST00000580533 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.04
SNORD3C-201ENST00000580533 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.04
SNORD3C-201ENST00000580533 TSPYL4Q9UJ04 414 aa15.27■□□□□ 0.04
SNORD3C-201ENST00000580533 NHSQ6T4R5 1651 aa15.26■□□□□ 0.03
SNORD3C-201ENST00000580533 ZNF521Q96K83 1311 aa15.26■□□□□ 0.03
SNORD3C-201ENST00000580533 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
SNORD3C-201ENST00000580533 ACSBG1Q96GR2 724 aa15.26■□□□□ 0.03
SNORD3C-201ENST00000580533 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
SNORD3C-201ENST00000580533 THUMPD2Q9BTF0 503 aaKnown RBP15.25■□□□□ 0.03
SNORD3C-201ENST00000580533 VIRMAQ69YN4 1812 aaKnown RBP15.24■□□□□ 0.03
SNORD3C-201ENST00000580533 TOGARAM1Q9Y4F4 1720 aa15.24■□□□□ 0.03
SNORD3C-201ENST00000580533 CCDC125Q86Z20 511 aa15.24■□□□□ 0.03
SNORD3C-201ENST00000580533 PIGBQ92521 554 aa15.24■□□□□ 0.03
SNORD3C-201ENST00000580533 GTF3C3Q9Y5Q9 886 aa15.24■□□□□ 0.03
SNORD3C-201ENST00000580533 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
SNORD3C-201ENST00000580533 CHL1O00533 1208 aa15.23■□□□□ 0.03
SNORD3C-201ENST00000580533 FAM182BQ5T319 152 aa15.23■□□□□ 0.03
SNORD3C-201ENST00000580533 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
SNORD3C-201ENST00000580533 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
SNORD3C-201ENST00000580533 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
SNORD3C-201ENST00000580533 FMNL2Q96PY5 1086 aa15.22■□□□□ 0.03
SNORD3C-201ENST00000580533 ITGB4P16144 1822 aa15.22■□□□□ 0.03
SNORD3C-201ENST00000580533 TRIM37O94972 964 aa15.21■□□□□ 0.03
SNORD3C-201ENST00000580533 ZNF853P0CG23 659 aa15.21■□□□□ 0.03
SNORD3C-201ENST00000580533 SBF2Q86WG5 1849 aa15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 KCNQ2O43526 872 aa15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 SLFN5Q08AF3 891 aa15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 VSIG10Q8N0Z9 540 aa15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 TEX13AQ9BXU3 409 aaPredicted RBP15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 MBIPQ9NS73 344 aa15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 KAT6BQ8WYB5 2073 aa15.2■□□□□ 0.02
SNORD3C-201ENST00000580533 FANCIQ9NVI1 1328 aa15.19■□□□□ 0.02
SNORD3C-201ENST00000580533 HOXB7P09629 217 aa15.19■□□□□ 0.02
SNORD3C-201ENST00000580533 CT47B1P0C2W7 299 aaPredicted RBP15.19■□□□□ 0.02
SNORD3C-201ENST00000580533 PALLDQ8WX93 1383 aa15.19■□□□□ 0.02
SNORD3C-201ENST00000580533 PAPPAQ13219 1627 aa15.18■□□□□ 0.02
SNORD3C-201ENST00000580533 BAG6P46379 1132 aa15.18■□□□□ 0.02
SNORD3C-201ENST00000580533 ATG3Q9NT62 314 aa15.18■□□□□ 0.02
SNORD3C-201ENST00000580533 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
SNORD3C-201ENST00000580533 BTAF1O14981 1849 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 PLSCR1O15162 318 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 APBA3O96018 575 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 SNRPA1P09661 255 aaKnown RBP15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 SLC39A6Q13433 755 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 MIS18AQ9NYP9 233 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 ASAP1Q9ULH1 1129 aa15.17■□□□□ 0.02
SNORD3C-201ENST00000580533 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
SNORD3C-201ENST00000580533 TSR2Q969E8 191 aaKnown RBP15.16■□□□□ 0.02
SNORD3C-201ENST00000580533 HEG1Q9ULI3 1381 aa15.15■□□□□ 0.02
SNORD3C-201ENST00000580533 PTCD1O75127 700 aaKnown RBP15.15■□□□□ 0.02
SNORD3C-201ENST00000580533 STARD3NLO95772 234 aa15.15■□□□□ 0.02
SNORD3C-201ENST00000580533 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
SNORD3C-201ENST00000580533 RGPD3A6NKT7 1758 aaPredicted RBP15.15■□□□□ 0.02
SNORD3C-201ENST00000580533 RGPD4Q7Z3J3 1758 aa15.15■□□□□ 0.02
SNORD3C-201ENST00000580533 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 LOC102724428A0A0B4J2F2 783 aa15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 SIK1P57059 783 aa15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 CDCA7LQ96GN5 454 aa15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 ZNF496Q96IT1 587 aaPredicted RBP15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 CCNL1Q9UK58 526 aaPredicted RBP15.14■□□□□ 0.01
SNORD3C-201ENST00000580533 KCPQ6ZWJ8 1503 aa15.13■□□□□ 0.01
SNORD3C-201ENST00000580533 ZNF831Q5JPB2 1677 aa15.13■□□□□ 0.01
SNORD3C-201ENST00000580533 ATP6V1AP38606 617 aa15.13■□□□□ 0.01
SNORD3C-201ENST00000580533 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
SNORD3C-201ENST00000580533 TNS1Q9HBL0 1735 aaKnown RBP15.13■□□□□ 0.01
SNORD3C-201ENST00000580533 GIGYF1O75420 1035 aaPredicted RBP15.12■□□□□ 0.01
SNORD3C-201ENST00000580533 EXOSC9Q06265 439 aaKnown RBP15.12■□□□□ 0.01
SNORD3C-201ENST00000580533 NPM2Q86SE8 214 aaKnown RBP15.12■□□□□ 0.01
SNORD3C-201ENST00000580533 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
SNORD3C-201ENST00000580533 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
SNORD3C-201ENST00000580533 CICQ96RK0 1608 aaPredicted RBP15.11■□□□□ 0.01
SNORD3C-201ENST00000580533 KCNQ3O43525 872 aa15.11■□□□□ 0.01
SNORD3C-201ENST00000580533 CCDC30Q5VVM6 783 aa15.11■□□□□ 0.01
SNORD3C-201ENST00000580533 STK31Q9BXU1 1019 aa15.11■□□□□ 0.01
SNORD3C-201ENST00000580533 LY75O60449 1722 aa15.1■□□□□ 0.01
SNORD3C-201ENST00000580533 HDGFL1Q5TGJ6 251 aa15.1■□□□□ 0.01
SNORD3C-201ENST00000580533 TXNRD1Q16881 649 aa15.09■□□□□ 0.01
SNORD3C-201ENST00000580533 PTF1AQ7RTS3 328 aa15.09■□□□□ 0.01
SNORD3C-201ENST00000580533 LAMB4A4D0S4 1761 aa15.08■□□□□ 0.01
SNORD3C-201ENST00000580533 ALDH1L2Q3SY69 923 aa15.08■□□□□ 0
SNORD3C-201ENST00000580533 C8orf58Q8NAV2 365 aa15.08■□□□□ 0
SNORD3C-201ENST00000580533 ELL2O00472 640 aaPredicted RBP15.07■□□□□ 0
SNORD3C-201ENST00000580533 EIF2S2P20042 333 aaKnown RBP15.07■□□□□ 0
SNORD3C-201ENST00000580533 DNAJC10Q8IXB1 793 aa15.07■□□□□ 0
SNORD3C-201ENST00000580533 UPF1Q92900 1129 aaKnown RBP eCLIP15.07■□□□□ 0
SNORD3C-201ENST00000580533 DBF4Q9UBU7 674 aaPredicted RBP15.07■□□□□ 0
SNORD3C-201ENST00000580533 CNTNAP4Q9C0A0 1308 aa15.07■□□□□ 0
SNORD3C-201ENST00000580533 C5P01031 1676 aa15.06■□□□□ 0
SNORD3C-201ENST00000580533 VAMP4O75379 141 aa15.06■□□□□ 0
SNORD3C-201ENST00000580533 RC3H1Q5TC82 1133 aaKnown RBP15.06■□□□□ 0
SNORD3C-201ENST00000580533 AK7Q96M32 723 aa15.06■□□□□ 0
SNORD3C-201ENST00000580533 CAMKK2Q96RR4 588 aa15.06■□□□□ 0
SNORD3C-201ENST00000580533 CYP19A1P11511 503 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms